CircRNA Information

General Information
circRNA Basic Information
CircID chr14:75651131|75651268
Strand +
CircType exon
Host Gene ENSG00000133935.6;
Algorism CIRI2;
Sequence CTCTTCCAGGCTCCCTTTTCCAGCCTTCCCCTTTTTCCCTTTTATTTTCATGCCTTGATTTGACTTGTGTGGTGGGAACATGTGAACTATGAAACTTAAACCTGCTGCCCACCCAGAGCAGCTGTGACCAAGGGCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:75651131|75651268 hsa-miR-23a-5p 0 0 1
chr14:75651131|75651268 hsa-miR-23a-3p 0 0 1
chr14:75651131|75651268 hsa-miR-214-5p 0 0 1
chr14:75651131|75651268 hsa-miR-214-3p 0 0 1
chr14:75651131|75651268 hsa-miR-23b-5p 0 0 1
chr14:75651131|75651268 hsa-miR-23b-3p 0 0 1
chr14:75651131|75651268 hsa-miR-326 0 0 1
chr14:75651131|75651268 hsa-miR-376b-5p 0 0 1
chr14:75651131|75651268 hsa-miR-376b-3p 0 0 1
chr14:75651131|75651268 hsa-miR-657 0 0 1
chr14:75651131|75651268 hsa-miR-541-5p 0 0 1
chr14:75651131|75651268 hsa-miR-541-3p 0 0 1
chr14:75651131|75651268 hsa-miR-1293 0 0 1
chr14:75651131|75651268 hsa-miR-654-5p 1 1 1
chr14:75651131|75651268 hsa-miR-1224-3p 0 0 1
chr14:75651131|75651268 hsa-miR-188-3p 0 0 1
chr14:75651131|75651268 hsa-miR-875-3p 0 0 1
chr14:75651131|75651268 hsa-miR-330-5p 0 0 1
chr14:75651131|75651268 hsa-miR-1260 0 0 1
chr14:75651131|75651268 hsa-miR-1280 0 0 1
chr14:75651131|75651268 hsa-miR-7 0 0 1
chr14:75651131|75651268 hsa-miR-1254 0 0 1
chr14:75651131|75651268 hsa-miR-129-3p 0 0 1
chr14:75651131|75651268 hsa-miR-376a 0 0 1
chr14:75651131|75651268 hsa-miR-762 1 0 0
chr14:75651131|75651268 hsa-miR-3154 1 1 0
chr14:75651131|75651268 hsa-miR-1260b 0 1 0
chr14:75651131|75651268 hsa-miR-3185 1 0 0
chr14:75651131|75651268 hsa-miR-3196 1 0 0
chr14:75651131|75651268 hsa-miR-3652 0 1 0
chr14:75651131|75651268 hsa-miR-4430 1 0 0
chr14:75651131|75651268 hsa-miR-4498 1 0 0
chr14:75651131|75651268 hsa-miR-4505 1 0 0
chr14:75651131|75651268 hsa-miR-1587 1 0 0
chr14:75651131|75651268 hsa-miR-4651 1 0 0
chr14:75651131|75651268 hsa-miR-4688 1 0 0
chr14:75651131|75651268 hsa-miR-4801 0 1 0
chr14:75651131|75651268 hsa-miR-5787 1 0 0
chr14:75651131|75651268 hsa-miR-6124 1 1 0
chr14:75651131|75651268 hsa-miR-6125 1 0 0
chr14:75651131|75651268 hsa-miR-6745 1 0 0
chr14:75651131|75651268 hsa-miR-125b-2-3p 1 1 0
chr14:75651131|75651268 hsa-miR-6734-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6825-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6894-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6510-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6089 1 0 0
chr14:75651131|75651268 hsa-miR-3192-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6873-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6880-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6746-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6776-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6732-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6805-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6827-5p 0 1 0
chr14:75651131|75651268 hsa-miR-6798-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6760-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6782-5p 1 0 0
chr14:75651131|75651268 hsa-miR-1226-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6753-5p 1 0 0
chr14:75651131|75651268 hsa-miR-3127-5p 1 0 0
chr14:75651131|75651268 hsa-miR-1228-5p 1 0 0
chr14:75651131|75651268 hsa-miR-149-3p 1 0 0
chr14:75651131|75651268 hsa-miR-6878-5p 1 0 0
chr14:75651131|75651268 hsa-miR-5584-5p 1 1 0
chr14:75651131|75651268 hsa-miR-483-5p 1 0 0
chr14:75651131|75651268 hsa-miR-1207-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6870-5p 1 0 0
chr14:75651131|75651268 hsa-miR-5001-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6743-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6756-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6779-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6780a-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6879-5p 1 0 0
chr14:75651131|75651268 hsa-miR-7111-5p 1 0 0
chr14:75651131|75651268 hsa-miR-3620-5p 1 0 0
chr14:75651131|75651268 hsa-miR-4728-5p 1 0 0
chr14:75651131|75651268 hsa-miR-5196-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6780b-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6862-5p 1 0 0
chr14:75651131|75651268 hsa-miR-10526-3p 1 1 0
chr14:75651131|75651268 hsa-miR-328-5p 1 0 0
chr14:75651131|75651268 hsa-miR-4725-3p 1 1 0
chr14:75651131|75651268 hsa-miR-6794-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6883-5p 1 0 0
chr14:75651131|75651268 hsa-miR-4723-5p 1 0 0
chr14:75651131|75651268 hsa-miR-4646-5p 1 1 0
chr14:75651131|75651268 hsa-miR-4747-5p 1 0 0
chr14:75651131|75651268 hsa-miR-4716-3p 1 0 0
chr14:75651131|75651268 hsa-miR-6750-5p 1 0 0
chr14:75651131|75651268 hsa-miR-6766-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6785-5p 1 1 0
chr14:75651131|75651268 hsa-miR-6884-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr14:75651131|75651268
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MFPPHKSNQGMKIKGKKGKAGKGSLEE
Nucleotide Sequence ATGTTCCCACCACACAAGTCAAATCAAGGCATGAAAATAAAAGGGAAAAAGGGGAAGGCTGGAAAAGGGAGCCTGGAAGAG
CircID chr14:75651131|75651268
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MLWVGSRFKFHSSHVPTTQVKSRHENKREKGEGWKREPGR
Nucleotide Sequence CTGCTCTGGGTGGGCAGCAGGTTTAAGTTTCATAGTTCACATGTTCCCACCACACAAGTCAAATCAAGGCATGAAAATAAAAGGGAAAAAGGGGAAGGCTGGAAAAGGGAGCCTGGAAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab