CircRNA Information

General Information
circRNA Basic Information
CircID chr14:76782269|76782459
Strand -
CircType exon
Host Gene ENSG00000071246.9;
Algorism CIRI2;
Sequence AGCAGCAGCCCTCTGGCCTTGGGATGTGATGATAAAGCAAGCCTAGGGCCAGGGTTTGGGGAGCAGAGAGAGCCAAGAAGTTGACCACGTGTGATTTCCAGCCCTTCCCACTGGGACTTGACTTCCCAGGTCAAGGAGTCCGTCTCATTCTGGCTGGTCGAGTGACCAGAGGCCTGTGTGAATGTGTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:76782269|76782459 hsa-miR-192-5p 0 0 1
chr14:76782269|76782459 hsa-miR-192-3p 0 0 1
chr14:76782269|76782459 hsa-miR-181c-5p 0 0 1
chr14:76782269|76782459 hsa-miR-181c-3p 0 0 1
chr14:76782269|76782459 hsa-miR-215-5p 0 0 1
chr14:76782269|76782459 hsa-miR-215-3p 0 0 1
chr14:76782269|76782459 hsa-miR-377-5p 0 0 1
chr14:76782269|76782459 hsa-miR-377-3p 0 0 1
chr14:76782269|76782459 hsa-miR-328-5p 0 0 1
chr14:76782269|76782459 hsa-miR-328-3p 0 0 1
chr14:76782269|76782459 hsa-miR-181d-5p 0 0 1
chr14:76782269|76782459 hsa-miR-181d-3p 0 0 1
chr14:76782269|76782459 hsa-miR-631 0 0 1
chr14:76782269|76782459 hsa-miR-645 0 0 1
chr14:76782269|76782459 hsa-miR-668-5p 0 0 1
chr14:76782269|76782459 hsa-miR-668-3p 0 0 1
chr14:76782269|76782459 hsa-miR-760 0 0 1
chr14:76782269|76782459 hsa-miR-1291 0 0 1
chr14:76782269|76782459 hsa-miR-139-3p 0 0 1
chr14:76782269|76782459 hsa-miR-767-3p 0 0 1
chr14:76782269|76782459 hsa-miR-875-3p 0 1 1
chr14:76782269|76782459 hsa-miR-181a 0 0 1
chr14:76782269|76782459 hsa-miR-181b 0 0 1
chr14:76782269|76782459 hsa-miR-3661 0 1 0
chr14:76782269|76782459 hsa-miR-4448 0 1 0
chr14:76782269|76782459 hsa-miR-4492 1 0 0
chr14:76782269|76782459 hsa-miR-4498 0 1 0
chr14:76782269|76782459 hsa-miR-4683 1 0 0
chr14:76782269|76782459 hsa-miR-4741 1 0 0
chr14:76782269|76782459 hsa-miR-6085 1 0 0
chr14:76782269|76782459 hsa-miR-6132 1 0 0
chr14:76782269|76782459 hsa-miR-7974 1 0 0
chr14:76782269|76782459 hsa-miR-212-5p 1 1 0
chr14:76782269|76782459 hsa-miR-6825-5p 1 0 0
chr14:76782269|76782459 hsa-miR-7851-3p 0 1 0
chr14:76782269|76782459 hsa-miR-3192-5p 0 1 0
chr14:76782269|76782459 hsa-miR-4753-5p 0 1 0
chr14:76782269|76782459 hsa-miR-6873-3p 0 1 0
chr14:76782269|76782459 hsa-miR-7110-3p 0 1 0
chr14:76782269|76782459 hsa-miR-6817-3p 0 1 0
chr14:76782269|76782459 hsa-miR-185-3p 1 0 0
chr14:76782269|76782459 hsa-miR-6829-5p 0 1 0
chr14:76782269|76782459 hsa-miR-6728-3p 0 1 0
chr14:76782269|76782459 hsa-miR-4733-5p 0 1 0
chr14:76782269|76782459 hsa-miR-204-3p 0 1 0
chr14:76782269|76782459 hsa-miR-4640-5p 0 1 0
chr14:76782269|76782459 hsa-miR-296-3p 1 0 0
chr14:76782269|76782459 hsa-miR-4446-3p 1 1 0
chr14:76782269|76782459 hsa-miR-6781-5p 1 0 0
chr14:76782269|76782459 hsa-miR-3922-5p 0 1 0
chr14:76782269|76782459 hsa-miR-7106-3p 0 1 0
chr14:76782269|76782459 hsa-miR-6828-3p 0 1 0
chr14:76782269|76782459 hsa-miR-4727-3p 0 1 0
chr14:76782269|76782459 hsa-miR-597-3p 0 1 0
chr14:76782269|76782459 hsa-miR-6741-3p 1 0 0
chr14:76782269|76782459 hsa-miR-6814-5p 0 1 0
chr14:76782269|76782459 hsa-miR-1298-5p 0 1 0
chr14:76782269|76782459 hsa-miR-5589-3p 1 0 0
chr14:76782269|76782459 hsa-miR-3177-5p 0 1 0
chr14:76782269|76782459 hsa-miR-4650-5p 0 1 0
chr14:76782269|76782459 hsa-miR-1273h-5p 0 1 0
chr14:76782269|76782459 hsa-miR-4763-3p 1 0 0
chr14:76782269|76782459 hsa-miR-5001-5p 1 1 0
chr14:76782269|76782459 hsa-miR-6756-5p 1 0 0
chr14:76782269|76782459 hsa-miR-7107-5p 1 0 0
chr14:76782269|76782459 hsa-miR-6763-5p 1 0 0
chr14:76782269|76782459 hsa-miR-6779-5p 1 1 0
chr14:76782269|76782459 hsa-miR-4646-5p 0 1 0
chr14:76782269|76782459 hsa-miR-4757-5p 0 1 0
chr14:76782269|76782459 hsa-miR-6837-5p 0 1 0
chr14:76782269|76782459 hsa-miR-6744-3p 0 1 0
chr14:76782269|76782459 hsa-miR-10397-5p 0 1 0
chr14:76782269|76782459 hsa-miR-6824-3p 0 1 0
chr14:76782269|76782459 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:76782269|76782459
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MTTCDFQPFPLGLDFPGQGVRLILAGRVTRGLCECVH
Nucleotide Sequence TTGACCACGTGTGATTTCCAGCCCTTCCCACTGGGACTTGACTTCCCAGGTCAAGGAGTCCGTCTCATTCTGGCTGGTCGAGTGACCAGAGGCCTGTGTGAATGTGTGCAC
CircID chr14:76782269|76782459
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MTWEVKSQWEGLEITRGQLLGSLCSPNPGPRLALSSHPKARGLL
Nucleotide Sequence TTGACCTGGGAAGTCAAGTCCCAGTGGGAAGGGCTGGAAATCACACGTGGTCAACTTCTTGGCTCTCTCTGCTCCCCAAACCCTGGCCCTAGGCTTGCTTTATCATCACATCCCAAGGCCAGAGGGCTGCTG
CircID chr14:76782269|76782459
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MALSAPQTLALGLLYHHIPRPEGCC
Nucleotide Sequence TTGGCTCTCTCTGCTCCCCAAACCCTGGCCCTAGGCTTGCTTTATCATCACATCCCAAGGCCAGAGGGCTGCTGC
CircID chr14:76782269|76782459
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MGSQVPVGRAGNHTWSTSWLSLLPKPWP
Nucleotide Sequence CTGGGAAGTCAAGTCCCAGTGGGAAGGGCTGGAAATCACACGTGGTCAACTTCTTGGCTCTCTCTGCTCCCCAAACCCTGGCCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab