CircRNA Information

General Information
circRNA Basic Information
CircID chr14:77338541|77338675
Strand -
CircType exon
Host Gene ENSG00000100580.7;
Algorism CIRI2;
Sequence CCCCATCTTCAAGATGTCCTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTGATTTATGGCTTTGCCTGGACCTTCTGTCTCCCTCAAATGTATAAAACTGTAACCCGACTACCTCGGGCACATGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:77338541|77338675 hsa-let-7b-5p 0 0 1
chr14:77338541|77338675 hsa-let-7b-3p 0 0 1
chr14:77338541|77338675 hsa-let-7c-5p 0 0 1
chr14:77338541|77338675 hsa-let-7c-3p 0 0 1
chr14:77338541|77338675 hsa-let-7d-5p 0 0 1
chr14:77338541|77338675 hsa-let-7d-3p 0 0 1
chr14:77338541|77338675 hsa-let-7e-5p 0 0 1
chr14:77338541|77338675 hsa-let-7e-3p 0 0 1
chr14:77338541|77338675 hsa-miR-98-5p 0 0 1
chr14:77338541|77338675 hsa-miR-98-3p 0 0 1
chr14:77338541|77338675 hsa-let-7g-5p 0 0 1
chr14:77338541|77338675 hsa-let-7g-3p 0 0 1
chr14:77338541|77338675 hsa-let-7i-5p 0 0 1
chr14:77338541|77338675 hsa-let-7i-3p 0 0 1
chr14:77338541|77338675 hsa-miR-196b-5p 0 0 1
chr14:77338541|77338675 hsa-miR-196b-3p 0 0 1
chr14:77338541|77338675 hsa-miR-493-5p 0 0 1
chr14:77338541|77338675 hsa-miR-493-3p 0 0 1
chr14:77338541|77338675 hsa-miR-940 0 0 1
chr14:77338541|77338675 hsa-miR-1286 0 0 1
chr14:77338541|77338675 hsa-miR-1304-5p 0 0 1
chr14:77338541|77338675 hsa-miR-1304-3p 0 0 1
chr14:77338541|77338675 hsa-miR-582-5p 0 0 1
chr14:77338541|77338675 hsa-miR-875-3p 0 0 1
chr14:77338541|77338675 hsa-miR-455-5p 0 0 1
chr14:77338541|77338675 hsa-let-7a 0 0 1
chr14:77338541|77338675 hsa-let-7f 0 0 1
chr14:77338541|77338675 hsa-miR-1254 0 0 1
chr14:77338541|77338675 hsa-miR-196a 0 0 1
chr14:77338541|77338675 hsa-miR-4298 1 0 0
chr14:77338541|77338675 hsa-miR-4436a 0 1 0
chr14:77338541|77338675 hsa-miR-4510 1 1 0
chr14:77338541|77338675 hsa-miR-4514 1 0 0
chr14:77338541|77338675 hsa-miR-4673 0 1 0
chr14:77338541|77338675 hsa-miR-4736 1 0 0
chr14:77338541|77338675 hsa-miR-4739 1 0 0
chr14:77338541|77338675 hsa-miR-6127 1 0 0
chr14:77338541|77338675 hsa-miR-6132 1 0 0
chr14:77338541|77338675 hsa-miR-6133 1 0 0
chr14:77338541|77338675 hsa-miR-12119 1 0 0
chr14:77338541|77338675 hsa-miR-6728-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6089 1 0 0
chr14:77338541|77338675 hsa-miR-6721-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6827-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6760-5p 0 1 0
chr14:77338541|77338675 hsa-miR-6810-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6824-5p 1 0 0
chr14:77338541|77338675 hsa-miR-550b-2-5p 1 1 0
chr14:77338541|77338675 hsa-let-7f-5p 0 1 0
chr14:77338541|77338675 hsa-let-7a-5p 1 1 0
chr14:77338541|77338675 hsa-miR-4742-5p 0 1 0
chr14:77338541|77338675 hsa-miR-5000-3p 0 1 0
chr14:77338541|77338675 hsa-miR-1207-5p 1 0 0
chr14:77338541|77338675 hsa-miR-4763-3p 1 0 0
chr14:77338541|77338675 hsa-miR-6870-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6893-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6803-5p 1 0 0
chr14:77338541|77338675 hsa-miR-7107-5p 1 1 0
chr14:77338541|77338675 hsa-miR-1249-5p 1 1 0
chr14:77338541|77338675 hsa-miR-6808-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6879-5p 1 0 0
chr14:77338541|77338675 hsa-miR-7111-5p 1 0 0
chr14:77338541|77338675 hsa-miR-5196-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6794-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6795-5p 1 0 0
chr14:77338541|77338675 hsa-miR-6887-5p 1 0 0
chr14:77338541|77338675 hsa-miR-4436b-3p 1 0 0
chr14:77338541|77338675 hsa-miR-3116 0 1 0
chr14:77338541|77338675 hsa-miR-6785-5p 1 0 0
chr14:77338541|77338675 hsa-miR-1185-1-3p 1 0 0
chr14:77338541|77338675 hsa-miR-1185-2-3p 1 0 0
chr14:77338541|77338675 hsa-miR-550a-3-5p 0 1 0
chr14:77338541|77338675 hsa-miR-550a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:77338541|77338675
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MPFQAKPVYTLHVLIYGFAWTFCLPQMYKTVTRLPRAHV
Nucleotide Sequence CTGCCTTTCCAGGCCAAACCAGTGTATACCTTACATGTATTGATTTATGGCTTTGCCTGGACCTTCTGTCTCCCTCAAATGTATAAAACTGTAACCCGACTACCTCGGGCACATGTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab