CircRNA Information

General Information
circRNA Basic Information
CircID chr14:77356443|77356626
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTGTTGAAAGTCTTCTTCTTTAGAGATTTGTTCTAAATGAATGTAATGGTAGATACAATGATGTCTGGGCTTTGTTTGAAATAATCTGTTGGTGAGTGGGGCAAGAAGGTAGGGCATGGAGGAAACCAGGCCAAGTAAAATCTTGTTGAAAACATAGGTAGGGTGCATGAGTCTTCATTCTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:77356443|77356626 hsa-miR-181c-5p 0 0 1
chr14:77356443|77356626 hsa-miR-181c-3p 0 0 1
chr14:77356443|77356626 hsa-miR-186-5p 0 0 1
chr14:77356443|77356626 hsa-miR-186-3p 0 0 1
chr14:77356443|77356626 hsa-miR-181d-5p 0 0 1
chr14:77356443|77356626 hsa-miR-181d-3p 0 0 1
chr14:77356443|77356626 hsa-miR-579-5p 0 0 1
chr14:77356443|77356626 hsa-miR-579-3p 0 0 1
chr14:77356443|77356626 hsa-miR-607 0 0 1
chr14:77356443|77356626 hsa-miR-421 0 0 1
chr14:77356443|77356626 hsa-miR-890 0 0 1
chr14:77356443|77356626 hsa-miR-216b-5p 0 0 1
chr14:77356443|77356626 hsa-miR-216b-3p 0 0 1
chr14:77356443|77356626 hsa-miR-1238-5p 0 0 1
chr14:77356443|77356626 hsa-miR-1238-3p 0 0 1
chr14:77356443|77356626 hsa-miR-1305 0 0 1
chr14:77356443|77356626 hsa-miR-1248 0 1 1
chr14:77356443|77356626 hsa-miR-885-5p 0 0 1
chr14:77356443|77356626 hsa-miR-502-3p 1 0 1
chr14:77356443|77356626 hsa-miR-501-3p 1 0 1
chr14:77356443|77356626 hsa-miR-181a 0 0 1
chr14:77356443|77356626 hsa-miR-181b 0 0 1
chr14:77356443|77356626 hsa-miR-664 0 0 1
chr14:77356443|77356626 hsa-miR-3185 0 1 0
chr14:77356443|77356626 hsa-miR-4323 1 0 0
chr14:77356443|77356626 hsa-miR-4286 0 1 0
chr14:77356443|77356626 hsa-miR-3909 1 0 0
chr14:77356443|77356626 hsa-miR-4432 0 1 0
chr14:77356443|77356626 hsa-miR-4744 0 1 0
chr14:77356443|77356626 hsa-miR-6075 1 0 0
chr14:77356443|77356626 hsa-miR-29b-1-5p 0 1 0
chr14:77356443|77356626 hsa-miR-6749-3p 1 0 0
chr14:77356443|77356626 hsa-miR-6747-3p 1 0 0
chr14:77356443|77356626 hsa-miR-6881-3p 1 0 0
chr14:77356443|77356626 hsa-miR-29b-2-5p 0 1 0
chr14:77356443|77356626 hsa-miR-874-5p 1 0 0
chr14:77356443|77356626 hsa-miR-6875-3p 1 1 0
chr14:77356443|77356626 hsa-miR-6735-3p 1 0 0
chr14:77356443|77356626 hsa-miR-7113-3p 1 0 0
chr14:77356443|77356626 hsa-miR-6830-5p 1 0 0
chr14:77356443|77356626 hsa-miR-4646-3p 1 0 0
chr14:77356443|77356626 hsa-miR-1237-3p 1 0 0
chr14:77356443|77356626 hsa-miR-4758-3p 1 1 0
chr14:77356443|77356626 hsa-miR-6752-3p 1 0 0
chr14:77356443|77356626 hsa-miR-6782-3p 1 0 0
chr14:77356443|77356626 hsa-miR-5189-3p 1 0 0
chr14:77356443|77356626 hsa-miR-4433a-5p 1 0 0
chr14:77356443|77356626 hsa-miR-3173-5p 1 1 0
chr14:77356443|77356626 hsa-miR-5699-5p 1 0 0
chr14:77356443|77356626 hsa-miR-7159-5p 0 1 0
chr14:77356443|77356626 hsa-miR-6890-3p 1 0 0
chr14:77356443|77356626 hsa-miR-3162-3p 1 1 0
chr14:77356443|77356626 hsa-miR-18b-3p 1 0 0
chr14:77356443|77356626 hsa-miR-3680-5p 0 1 0
chr14:77356443|77356626 hsa-miR-520f-5p 1 1 0
chr14:77356443|77356626 hsa-miR-6799-3p 1 0 0
chr14:77356443|77356626 hsa-miR-518d-5p 0 1 0
chr14:77356443|77356626 hsa-miR-518e-5p 0 1 0
chr14:77356443|77356626 hsa-miR-518f-5p 0 1 0
chr14:77356443|77356626 hsa-miR-519a-5p 0 1 0
chr14:77356443|77356626 hsa-miR-519b-5p 0 1 0
chr14:77356443|77356626 hsa-miR-519c-5p 0 1 0
chr14:77356443|77356626 hsa-miR-520c-5p 0 1 0
chr14:77356443|77356626 hsa-miR-522-5p 0 1 0
chr14:77356443|77356626 hsa-miR-523-5p 0 1 0
chr14:77356443|77356626 hsa-miR-526a-5p 0 1 0
chr14:77356443|77356626 hsa-miR-6792-3p 1 1 0
chr14:77356443|77356626 hsa-miR-4691-5p 0 1 0
chr14:77356443|77356626 hsa-miR-5588-3p 1 0 0
chr14:77356443|77356626 hsa-miR-4724-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:77356443|77356626
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MFSTRFYLAWFPPCPTFLPHSPTDYFKQSPDIIVSTITFI
Nucleotide Sequence ATGTTTTCAACAAGATTTTACTTGGCCTGGTTTCCTCCATGCCCTACCTTCTTGCCCCACTCACCAACAGATTATTTCAAACAAAGCCCAGACATCATTGTATCTACCATTACATTCATTTAG
CircID chr14:77356443|77356626
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MKTHAPYLCFQQDFTWPGFLHALPSCPTHQQIISNKAQTSLYLPLHSFRTNL
Nucleotide Sequence ATGAAGACTCATGCACCCTACCTATGTTTTCAACAAGATTTTACTTGGCCTGGTTTCCTCCATGCCCTACCTTCTTGCCCCACTCACCAACAGATTATTTCAAACAAAGCCCAGACATCATTGTATCTACCATTACATTCATTTAGAACAAATCTCTAA
CircID chr14:77356443|77356626
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MHPTYVFNKILLGLVSSMPYLLAPLTNRLFQTKPRHHCIYHYIHLEQISKEEDFQH
Nucleotide Sequence ATGCACCCTACCTATGTTTTCAACAAGATTTTACTTGGCCTGGTTTCCTCCATGCCCTACCTTCTTGCCCCACTCACCAACAGATTATTTCAAACAAAGCCCAGACATCATTGTATCTACCATTACATTCATTTAGAACAAATCTCTAAAGAAGAAGACTTTCAACAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab