CircRNA Information

General Information
circRNA Basic Information
CircID chr14:77462160|77465667
Strand +
CircType exon
Host Gene ENSG00000100591.7;
Algorism find_circ;CIRI2;DCC;
Sequence GTACTTCTAAGTCAGGAGTACAATACAAAGGACATGTGGAGATCCCCAATTTGTCTGATGAAAACAGCGTGGATGAAGTGGAGATTAGTGTGAGCCTTGCCAAAGATGAGCCTGACACAAATCTCGTGGCCTTAATGAAGGAAGAAGGGGTGAAACTTCTAAGAGAAGCAATGGGAATTTACATCAGCACCCTCAAAACAGAGTTCACCCAGGGCATGATCTTACCTACAATGAATGGAGAGTCAGTAGACCCAGTGGGGCAGCCAGCACTGAAAACTGAGGAGCGCAAGGCTAAGCCTGCTCCTTCAAAAACCCAGGCCAGACCTGTTGGAGTCAAAATCCCCACTTGTAAGATCACTCTTAAGGAAACCTTCCTGACGTCACCAGAGGAGCTCTATAGAGTGTTTACCACCCAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:77462160|77465667 hsa-miR-205-5p 0 1 1
chr14:77462160|77465667 hsa-miR-182-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:77462160|77465667 U2AF2 2 4 3
chr14:77462160|77465667 ELAVL1 2 1 3
chr14:77462160|77465667 NUMA1 1 0 1
chr14:77462160|77465667 SF3B4 2 0 0
chr14:77462160|77465667 FAM120A 0 2 1
chr14:77462160|77465667 PRPF8 0 2 1
chr14:77462160|77465667 TNRC6A 0 0 1
chr14:77462160|77465667 FMR1 2 2 5
chr14:77462160|77465667 CPSF6 0 0 2
chr14:77462160|77465667 NUDT21 1 0 0
chr14:77462160|77465667 TIA1 0 1 0
chr14:77462160|77465667 AGO2 0 0 5
chr14:77462160|77465667 GNL3 0 0 1
chr14:77462160|77465667 DGCR8 1 1 2
chr14:77462160|77465667 SRSF7 0 1 1
chr14:77462160|77465667 SRSF1 1 0 2
chr14:77462160|77465667 NOP58 0 1 7
chr14:77462160|77465667 U2AF1 0 1 2
chr14:77462160|77465667 NOP56 2 0 2
chr14:77462160|77465667 SRSF9 0 1 1
chr14:77462160|77465667 HNRNPU 0 0 1
chr14:77462160|77465667 DDX54 0 0 6
chr14:77462160|77465667 PCBP2 0 1 0
chr14:77462160|77465667 HNRNPM 1 0 0
chr14:77462160|77465667 SF3A3 1 0 1
chr14:77462160|77465667 HNRNPL 0 1 0
chr14:77462160|77465667 PTBP1 1 0 1
chr14:77462160|77465667 HNRNPC 1 8 0
chr14:77462160|77465667 YWHAG 1 0 0
chr14:77462160|77465667 ZNF184 1 0 0
chr14:77462160|77465667 LARP7 0 0 1
chr14:77462160|77465667 SMNDC1 0 0 1
chr14:77462160|77465667 MSI2 0 0 1
chr14:77462160|77465667 HNRNPA1 1 0 0
chr14:77462160|77465667 LIN28B 0 0 3
chr14:77462160|77465667 FXR1 2 0 6
chr14:77462160|77465667 FXR2 0 0 1
chr14:77462160|77465667 RBM22 0 1 0
chr14:77462160|77465667 SND1 0 1 3
chr14:77462160|77465667 IGF2BP1 0 0 1
chr14:77462160|77465667 IGF2BP3 0 0 1
chr14:77462160|77465667 IGF2BP2 2 3 13
chr14:77462160|77465667 HNRNPUL1 0 0 1
chr14:77462160|77465667 TARDBP 4 0 1
chr14:77462160|77465667 TAF15 3 1 0
chr14:77462160|77465667 BUD13 1 1 0
chr14:77462160|77465667 CNBP 0 0 1
chr14:77462160|77465667 SLTM 0 1 0
chr14:77462160|77465667 AUH 0 0 1
chr14:77462160|77465667 RBM47 0 0 1
chr14:77462160|77465667 CSTF2T 0 0 1
chr14:77462160|77465667 TRA2A 1 0 0
chr14:77462160|77465667 FUS 0 1 0
chr14:77462160|77465667 LARP4B 0 0 1
chr14:77462160|77465667 RNF219 1 0 0
chr14:77462160|77465667 ILF3 0 1 0
chr14:77462160|77465667 TIAL1 0 1 0
chr14:77462160|77465667 EIF4G2 0 1 0
chr14:77462160|77465667 AIFM1 0 0 1
chr14:77462160|77465667 EWSR1 0 0 1
chr14:77462160|77465667 EIF4A3 3 2 7
chr14:77462160|77465667 FBL 0 1 5