CircRNA Information

General Information
circRNA Basic Information
CircID chr14:77722933|77723176
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTGCCAAGTAGCTGGGACTACAGGCGCCTGCCACGACCATGCCCGGCTAATTTTTTGTACTTTTAGTAGACACAGGGTTTCATCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCCCGCATTGGCCTCCCAAAGTGCTGGGATTACAGGGGTGAACCACTGCGCCCGGCCACCATGATTGGTACACATCTTAAATAACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:77722933|77723176 hsa-miR-10a-5p 0 0 1
chr14:77722933|77723176 hsa-miR-10a-3p 0 0 1
chr14:77722933|77723176 hsa-miR-10b-5p 0 0 1
chr14:77722933|77723176 hsa-miR-10b-3p 0 0 1
chr14:77722933|77723176 hsa-miR-890 0 0 1
chr14:77722933|77723176 hsa-miR-934 0 0 1
chr14:77722933|77723176 hsa-miR-940 0 0 1
chr14:77722933|77723176 hsa-miR-1204 0 0 1
chr14:77722933|77723176 hsa-miR-548k 0 0 1
chr14:77722933|77723176 hsa-miR-548n 0 0 1
chr14:77722933|77723176 hsa-miR-1827 0 1 1
chr14:77722933|77723176 hsa-miR-140-5p 0 1 1
chr14:77722933|77723176 hsa-miR-566 0 0 1
chr14:77722933|77723176 hsa-miR-576-3p 0 0 1
chr14:77722933|77723176 hsa-miR-1207-5p 1 0 1
chr14:77722933|77723176 hsa-miR-638 1 0 0
chr14:77722933|77723176 hsa-miR-663a 1 0 0
chr14:77722933|77723176 hsa-miR-1268a 1 1 0
chr14:77722933|77723176 hsa-miR-3621 1 0 0
chr14:77722933|77723176 hsa-miR-1268b 1 1 0
chr14:77722933|77723176 hsa-miR-4449 1 0 0
chr14:77722933|77723176 hsa-miR-3973 0 1 0
chr14:77722933|77723176 hsa-miR-4656 1 1 0
chr14:77722933|77723176 hsa-miR-4683 0 1 0
chr14:77722933|77723176 hsa-miR-4688 1 0 0
chr14:77722933|77723176 hsa-miR-4734 1 0 0
chr14:77722933|77723176 hsa-miR-4736 1 0 0
chr14:77722933|77723176 hsa-miR-4739 1 0 0
chr14:77722933|77723176 hsa-miR-4767 1 1 0
chr14:77722933|77723176 hsa-miR-4794 0 1 0
chr14:77722933|77723176 hsa-miR-5192 1 0 0
chr14:77722933|77723176 hsa-miR-5787 1 0 0
chr14:77722933|77723176 hsa-miR-6133 1 0 0
chr14:77722933|77723176 hsa-miR-6745 1 0 0
chr14:77722933|77723176 hsa-miR-6860 1 1 0
chr14:77722933|77723176 hsa-miR-7150 1 1 0
chr14:77722933|77723176 hsa-miR-10226 1 0 0
chr14:77722933|77723176 hsa-miR-143-5p 0 1 0
chr14:77722933|77723176 hsa-miR-323a-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6765-5p 1 1 0
chr14:77722933|77723176 hsa-miR-671-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6861-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6894-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6799-5p 1 0 0
chr14:77722933|77723176 hsa-miR-4768-3p 0 1 0
chr14:77722933|77723176 hsa-miR-6089 1 1 0
chr14:77722933|77723176 hsa-miR-3192-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6746-5p 1 0 0
chr14:77722933|77723176 hsa-miR-4722-5p 1 1 0
chr14:77722933|77723176 hsa-miR-3622b-5p 1 1 0
chr14:77722933|77723176 hsa-miR-127-3p 1 0 0
chr14:77722933|77723176 hsa-miR-7108-5p 1 0 0
chr14:77722933|77723176 hsa-miR-2467-3p 1 0 0
chr14:77722933|77723176 hsa-miR-6821-5p 1 0 0
chr14:77722933|77723176 hsa-miR-30b-3p 0 1 0
chr14:77722933|77723176 hsa-miR-4793-5p 0 1 0
chr14:77722933|77723176 hsa-miR-1229-5p 1 0 0
chr14:77722933|77723176 hsa-miR-885-3p 1 0 0
chr14:77722933|77723176 hsa-miR-1228-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6771-5p 1 0 0
chr14:77722933|77723176 hsa-miR-4690-5p 1 0 0
chr14:77722933|77723176 hsa-miR-4743-5p 1 0 0
chr14:77722933|77723176 hsa-miR-146b-3p 0 1 0
chr14:77722933|77723176 hsa-miR-664b-5p 1 0 0
chr14:77722933|77723176 hsa-miR-3619-3p 0 1 0
chr14:77722933|77723176 hsa-miR-6720-3p 0 1 0
chr14:77722933|77723176 hsa-miR-4750-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6802-3p 0 1 0
chr14:77722933|77723176 hsa-miR-20b-3p 0 1 0
chr14:77722933|77723176 hsa-miR-3124-5p 1 0 0
chr14:77722933|77723176 hsa-miR-3177-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6502-3p 0 1 0
chr14:77722933|77723176 hsa-miR-1233-5p 1 0 0
chr14:77722933|77723176 hsa-miR-1273h-5p 1 1 0
chr14:77722933|77723176 hsa-miR-4763-3p 1 0 0
chr14:77722933|77723176 hsa-miR-6778-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6787-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6893-5p 1 1 0
chr14:77722933|77723176 hsa-miR-6775-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6743-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6756-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6722-3p 1 0 0
chr14:77722933|77723176 hsa-miR-6774-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6780a-5p 0 1 0
chr14:77722933|77723176 hsa-miR-6808-5p 1 1 0
chr14:77722933|77723176 hsa-miR-6879-5p 1 0 0
chr14:77722933|77723176 hsa-miR-10396b-5p 1 0 0
chr14:77722933|77723176 hsa-miR-328-5p 1 0 0
chr14:77722933|77723176 hsa-miR-4649-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6848-5p 1 0 0
chr14:77722933|77723176 hsa-miR-6831-5p 1 0 0
chr14:77722933|77723176 hsa-miR-365a-5p 1 0 0
chr14:77722933|77723176 hsa-miR-1271-3p 1 0 0
chr14:77722933|77723176 hsa-miR-6785-5p 1 0 0
chr14:77722933|77723176 hsa-miR-504-5p 1 0 0
chr14:77722933|77723176 hsa-miR-363-5p 1 1 0
chr14:77722933|77723176 hsa-miR-5588-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:77722933|77723176
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MCTNHGGRAQWFTPVIPALWEANAGGSRGQEIETILANTMKPCVY
Nucleotide Sequence ATGTGTACCAATCATGGTGGCCGGGCGCAGTGGTTCACCCCTGTAATCCCAGCACTTTGGGAGGCCAATGCGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACACGATGAAACCCTGTGTCTACTAA
CircID chr14:77722933|77723176
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MCLLKVQKISRAWSWQAPVVPATWQAEAGEWREPG
Nucleotide Sequence CTGTGTCTACTAAAAGTACAAAAAATTAGCCGGGCATGGTCGTGGCAGGCGCCTGTAGTCCCAGCTACTTGGCAGGCTGAGGCAGGAGAATGGCGTGAACCCGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab