CircRNA Information

General Information
circRNA Basic Information
CircID chr14:81476663|81476895
Strand +
CircType exon
Host Gene ENSG00000071537.12;
Algorism CIRI2;
Sequence CTTGGATCAGTGGTCACCTCCCAGAAGAGGCACGGCACAAGGAAGCATTGAATTCCTAAAGCTGCTTAGAATCTGATGCCTTTATTTTCAGGGATAAGTAACTCTTACCTAAACTGAGCTGAATGTTTGTTTCAGTGCCATATGGAATAACAACTTTCAGTGGCTTTTTTTTTTCTTTTCTGGAAACATATGTGAGACACTCAGAGTAATGTCTACTGTATCCAGCTATCTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:81476663|81476895 hsa-miR-181c-5p 0 0 1
chr14:81476663|81476895 hsa-miR-181c-3p 0 0 1
chr14:81476663|81476895 hsa-miR-183-5p 0 0 1
chr14:81476663|81476895 hsa-miR-183-3p 0 0 1
chr14:81476663|81476895 hsa-miR-144-5p 0 0 1
chr14:81476663|81476895 hsa-miR-144-3p 0 0 1
chr14:81476663|81476895 hsa-miR-382-5p 0 0 1
chr14:81476663|81476895 hsa-miR-382-3p 0 0 1
chr14:81476663|81476895 hsa-miR-494-5p 0 0 1
chr14:81476663|81476895 hsa-miR-494-3p 0 0 1
chr14:81476663|81476895 hsa-miR-495-5p 0 0 1
chr14:81476663|81476895 hsa-miR-495-3p 0 0 1
chr14:81476663|81476895 hsa-miR-181d-5p 0 0 1
chr14:81476663|81476895 hsa-miR-181d-3p 0 0 1
chr14:81476663|81476895 hsa-miR-587 0 1 1
chr14:81476663|81476895 hsa-miR-640 0 0 1
chr14:81476663|81476895 hsa-miR-646 0 0 1
chr14:81476663|81476895 hsa-miR-651-5p 0 0 1
chr14:81476663|81476895 hsa-miR-651-3p 0 0 1
chr14:81476663|81476895 hsa-miR-411-5p 0 0 1
chr14:81476663|81476895 hsa-miR-411-3p 0 0 1
chr14:81476663|81476895 hsa-miR-543 0 0 1
chr14:81476663|81476895 hsa-miR-936 0 0 1
chr14:81476663|81476895 hsa-miR-1287-5p 0 0 1
chr14:81476663|81476895 hsa-miR-1287-3p 0 0 1
chr14:81476663|81476895 hsa-miR-574-5p 0 0 1
chr14:81476663|81476895 hsa-miR-525-5p 0 0 1
chr14:81476663|81476895 hsa-miR-331-5p 0 0 1
chr14:81476663|81476895 hsa-miR-502-5p 0 0 1
chr14:81476663|81476895 hsa-miR-188-5p 0 0 1
chr14:81476663|81476895 hsa-miR-520a-5p 0 0 1
chr14:81476663|81476895 hsa-miR-125a-5p 0 0 1
chr14:81476663|81476895 hsa-miR-342-3p 0 0 1
chr14:81476663|81476895 hsa-miR-516a-3p 0 0 1
chr14:81476663|81476895 hsa-miR-125b 0 0 1
chr14:81476663|81476895 hsa-miR-181a 0 0 1
chr14:81476663|81476895 hsa-miR-181b 0 0 1
chr14:81476663|81476895 hsa-miR-323-3p 0 0 1
chr14:81476663|81476895 hsa-miR-101 0 0 1
chr14:81476663|81476895 hsa-miR-567 0 1 0
chr14:81476663|81476895 hsa-miR-3921 0 1 0
chr14:81476663|81476895 hsa-miR-3689c 0 1 0
chr14:81476663|81476895 hsa-miR-6854-5p 0 1 0
chr14:81476663|81476895 hsa-miR-6799-5p 1 1 0
chr14:81476663|81476895 hsa-miR-3192-5p 0 1 0
chr14:81476663|81476895 hsa-miR-181a-2-3p 0 1 0
chr14:81476663|81476895 hsa-miR-6732-5p 1 0 0
chr14:81476663|81476895 hsa-miR-30b-3p 0 1 0
chr14:81476663|81476895 hsa-miR-7854-3p 0 1 0
chr14:81476663|81476895 hsa-miR-4787-5p 1 0 0
chr14:81476663|81476895 hsa-miR-181b-5p 0 1 0
chr14:81476663|81476895 hsa-miR-181a-5p 0 1 0
chr14:81476663|81476895 hsa-miR-1273h-5p 0 1 0
chr14:81476663|81476895 hsa-miR-3689b-3p 0 1 0
chr14:81476663|81476895 hsa-miR-6842-5p 0 1 0
chr14:81476663|81476895 hsa-miR-6851-5p 0 1 0
chr14:81476663|81476895 hsa-miR-6779-5p 1 0 0
chr14:81476663|81476895 hsa-miR-6780a-5p 1 1 0
chr14:81476663|81476895 hsa-miR-3689a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:81476663|81476895
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MNVCFSAIWNNNFQWLFFFFSGNICETLRVMSTVSSYL
Nucleotide Sequence CTGAATGTTTGTTTCAGTGCCATATGGAATAACAACTTTCAGTGGCTTTTTTTTTTCTTTTCTGGAAACATATGTGAGACACTCAGAGTAATGTCTACTGTATCCAGCTATCTT

CircID chr14:81476663|81476895
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MFVSVPYGITTFSGFFFSFLETYVRHSE
Nucleotide Sequence ATGTTTGTTTCAGTGCCATATGGAATAACAACTTTCAGTGGCTTTTTTTTTTCTTTTCTGGAAACATATGTGAGACACTCAGAGTAA

CircID chr14:81476663|81476895
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MKVVIPYGTETNIQLSLGKSYLSLKIKASDSKQL
Nucleotide Sequence CTGAAAGTTGTTATTCCATATGGCACTGAAACAAACATTCAGCTCAGTTTAGGTAAGAGTTACTTATCCCTGAAAATAAAGGCATCAGATTCTAAGCAGCTTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites