CircRNA Information

General Information
circRNA Basic Information
CircID chr14:92652928|92653053
Strand -
CircType exon
Host Gene ENSG00000100599.14;
Algorism CIRI2;
Sequence AGCCTGGAGATGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGGAGATTCGCACCATGATGACCCAGCTCAAGAGCTACCTGCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCCCGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:92652928|92653053 hsa-miR-107 0 0 1
chr14:92652928|92653053 hsa-miR-214-5p 0 0 1
chr14:92652928|92653053 hsa-miR-214-3p 0 0 1
chr14:92652928|92653053 hsa-miR-526b-5p 0 0 1
chr14:92652928|92653053 hsa-miR-526b-3p 0 0 1
chr14:92652928|92653053 hsa-miR-558 0 0 1
chr14:92652928|92653053 hsa-miR-766-5p 0 0 1
chr14:92652928|92653053 hsa-miR-766-3p 0 0 1
chr14:92652928|92653053 hsa-miR-675-5p 0 0 1
chr14:92652928|92653053 hsa-miR-675-3p 0 0 1
chr14:92652928|92653053 hsa-miR-1205 0 0 1
chr14:92652928|92653053 hsa-miR-1287-5p 0 0 1
chr14:92652928|92653053 hsa-miR-1287-3p 0 0 1
chr14:92652928|92653053 hsa-miR-1250-5p 0 0 1
chr14:92652928|92653053 hsa-miR-1250-3p 0 0 1
chr14:92652928|92653053 hsa-miR-423-3p 0 0 1
chr14:92652928|92653053 hsa-miR-615-5p 1 1 1
chr14:92652928|92653053 hsa-miR-1184 0 1 1
chr14:92652928|92653053 hsa-miR-103 0 0 1
chr14:92652928|92653053 hsa-miR-663 0 0 1
chr14:92652928|92653053 hsa-miR-661 1 0 0
chr14:92652928|92653053 hsa-miR-663a 0 1 0
chr14:92652928|92653053 hsa-miR-762 1 0 0
chr14:92652928|92653053 hsa-miR-1976 0 1 0
chr14:92652928|92653053 hsa-miR-3907 0 1 0
chr14:92652928|92653053 hsa-miR-3909 1 0 0
chr14:92652928|92653053 hsa-miR-1587 1 0 0
chr14:92652928|92653053 hsa-miR-4706 1 0 0
chr14:92652928|92653053 hsa-miR-7155-5p 1 0 0
chr14:92652928|92653053 hsa-miR-6820-5p 1 0 0
chr14:92652928|92653053 hsa-miR-5589-5p 1 1 0
chr14:92652928|92653053 hsa-miR-3944-3p 1 0 0
chr14:92652928|92653053 hsa-miR-6753-5p 0 1 0
chr14:92652928|92653053 hsa-miR-1228-5p 1 0 0
chr14:92652928|92653053 hsa-miR-4783-5p 0 1 0
chr14:92652928|92653053 hsa-miR-4733-3p 0 1 0
chr14:92652928|92653053 hsa-miR-208a-5p 1 1 0
chr14:92652928|92653053 hsa-miR-744-5p 1 0 0
chr14:92652928|92653053 hsa-miR-5001-5p 1 0 0
chr14:92652928|92653053 hsa-miR-3620-5p 1 0 0
chr14:92652928|92653053 hsa-miR-4685-5p 0 1 0
chr14:92652928|92653053 hsa-miR-4749-5p 1 0 0
chr14:92652928|92653053 hsa-miR-4691-5p 1 0 0
chr14:92652928|92653053 hsa-miR-3619-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:92652928|92653053
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MEMMARQTSSTEMLQEIRTMMTQLKSYLLQSTELKALVDPA
Nucleotide Sequence CTGGAGATGATGGCGCGCCAGACCTCCAGCACGGAGATGCTGCAGGAGATTCGCACCATGATGACCCAGCTCAAGAGCTACCTGCTGCAGAGCACCGAGCTCAAGGCCCTGGTGGACCCCGCC

CircID chr14:92652928|92653053
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MQQVALELGHHGANLLQHLRAGGLARHHLQA
Nucleotide Sequence CTGCAGCAGGTAGCTCTTGAGCTGGGTCATCATGGTGCGAATCTCCTGCAGCATCTCCGTGCTGGAGGTCTGGCGCGCCATCATCTCCAGGCT

CircID chr14:92652928|92653053
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MSWVIMVRISCSISVLEVWRAIISR
Nucleotide Sequence TTGAGCTGGGTCATCATGGTGCGAATCTCCTGCAGCATCTCCGTGCTGGAGGTCTGGCGCGCCATCATCTCCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites