CircRNA Information

General Information
circRNA Basic Information
CircID chr14:93239637|93239783
Strand -
CircType exon
Host Gene ENSG00000011114.13;
Algorism CIRI2;
Sequence GCCTGTTTACCTTCTGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACGCAAAGTTTTAGCCAGGTAAGCTATTGTATGATTAAAAGCAAACTTTATAAACTAAATAATCTTAGGAATAGTGGCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:93239637|93239783 hsa-miR-21-5p 0 0 1
chr14:93239637|93239783 hsa-miR-21-3p 0 0 1
chr14:93239637|93239783 hsa-miR-30a-5p 0 0 1
chr14:93239637|93239783 hsa-miR-30a-3p 0 0 1
chr14:93239637|93239783 hsa-miR-30d-5p 0 0 1
chr14:93239637|93239783 hsa-miR-30d-3p 0 0 1
chr14:93239637|93239783 hsa-miR-30b-5p 0 0 1
chr14:93239637|93239783 hsa-miR-30b-3p 0 0 1
chr14:93239637|93239783 hsa-miR-30e-5p 0 0 1
chr14:93239637|93239783 hsa-miR-30e-3p 0 0 1
chr14:93239637|93239783 hsa-miR-340-5p 0 0 1
chr14:93239637|93239783 hsa-miR-340-3p 0 0 1
chr14:93239637|93239783 hsa-miR-487a-5p 0 0 1
chr14:93239637|93239783 hsa-miR-487a-3p 0 0 1
chr14:93239637|93239783 hsa-miR-561-5p 0 0 1
chr14:93239637|93239783 hsa-miR-561-3p 0 0 1
chr14:93239637|93239783 hsa-miR-588 0 0 1
chr14:93239637|93239783 hsa-miR-619-5p 0 0 1
chr14:93239637|93239783 hsa-miR-619-3p 0 0 1
chr14:93239637|93239783 hsa-miR-298 0 0 1
chr14:93239637|93239783 hsa-miR-548e-5p 0 0 1
chr14:93239637|93239783 hsa-miR-548e-3p 0 0 1
chr14:93239637|93239783 hsa-miR-142-5p 0 0 1
chr14:93239637|93239783 hsa-miR-338-5p 0 0 1
chr14:93239637|93239783 hsa-miR-485-3p 0 0 1
chr14:93239637|93239783 hsa-miR-590-5p 0 0 1
chr14:93239637|93239783 hsa-miR-548a-3p 0 0 1
chr14:93239637|93239783 hsa-miR-30c 0 0 1
chr14:93239637|93239783 hsa-miR-548f 0 0 1
chr14:93239637|93239783 hsa-miR-638 1 0 0
chr14:93239637|93239783 hsa-miR-4491 1 0 0
chr14:93239637|93239783 hsa-miR-4754 1 0 0
chr14:93239637|93239783 hsa-miR-6728-5p 1 0 0
chr14:93239637|93239783 hsa-miR-6742-5p 1 0 0
chr14:93239637|93239783 hsa-miR-6796-5p 1 0 0
chr14:93239637|93239783 hsa-miR-3202 1 0 0
chr14:93239637|93239783 hsa-miR-299-3p 1 0 0
chr14:93239637|93239783 hsa-miR-4800-5p 1 0 0
chr14:93239637|93239783 hsa-miR-4645-3p 1 0 0
chr14:93239637|93239783 hsa-miR-1233-5p 1 0 0
chr14:93239637|93239783 hsa-miR-6778-5p 1 0 0
chr14:93239637|93239783 hsa-miR-6803-5p 1 0 0
chr14:93239637|93239783 hsa-miR-4769-5p 1 0 0
chr14:93239637|93239783 hsa-miR-6855-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:93239637|93239783
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence LFTFCKSHRSAIPQIKASFPFIRKVLAR
Nucleotide Sequence CTGTTTACCTTCTGCAAGTCGCATCGGTCCGCAATCCCACAGATTAAAGCAAGTTTTCCCTTTATACGCAAAGTTTTAGCCAGGTAA

CircID chr14:93239637|93239783
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MAKTLRIKGKLALICGIADRCDLQKVNR
Nucleotide Sequence CTGGCTAAAACTTTGCGTATAAAGGGAAAACTTGCTTTAATCTGTGGGATTGCGGACCGATGCGACTTGCAGAAGGTAAACAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites