CircRNA Information

General Information
circRNA Basic Information
CircID chr14:93467671|93542696
Strand +
CircType exon
Host Gene ENSG00000133958.13;
Algorism CIRI2;find_circ;DCC;
Sequence TTGCTTCCAAGATCCGGTACTTGCAGGAATATCATAACCGGGTTCTCCACAACATTTATCCTGTACCATCAGGAACAGATATTGCAAACACCTTGAAATACTTTTCTCAGACCTTGTTAAGCGTCCTGCGAGATGCTCCCTCAGAACGCGGCCCGCAAAGTCGTGATGCTCAGTTGTCAGACTACCCTTCTTTGGACTACCAAGGCCTCTACGTGACTTTGGTGACCCTCCTGGATCTAGTTCCTTTACTACAGCACGGCCAACACGATCTTGGACAGTCGATATTTTATACAACTACATGTTTGCTACCTTTTCTCAATGATGATATTCTGAGTACTTTGCCCTACACGATGATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGATATCATTGAATATCTTAGCACATCTTTTCTACCAATGGCTATATGTGAGCCTCTGCACACCCAGTGAGAACACGCCTACAGAAAGCTTGGCCCGGCTGGTGGCCATGGTGTTTCAGTGGTTTCACTCCACTGCGTATATGATGGATGATGAAGTGGGAAGTCTGGTGGAAAAGCTGAAGCCTCAGTTTGTCACCAAATGGCTGAAGACCGTATGTGATGTTCGCTTCGATGTCATGGTCATGTGCCTTCTTCCTAAACCCATGGAATTTGCCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr14:93467671|93542696
ORF Type ORF1
Protein Length 147
Nucleotide Length 441
Protein Sequence LQEYHNRVLHNIYPVPSGTDIANTLKYFSQTLLSVLRDAPSERGPQSRDAQLSDYPSLDYQGLYVTLVTLLDLVPLLQHGQHDLGQSIFYTTTCLLPFLNDDILSTLPYTMISTLATFPPFLHKDIIEYLSTSFLPMAICEPLHTQ*
Nucleotide Sequence TTGCAGGAATATCATAACCGGGTTCTCCACAACATTTATCCTGTACCATCAGGAACAGATATTGCAAACACCTTGAAATACTTTTCTCAGACCTTGTTAAGCGTCCTGCGAGATGCTCCCTCAGAACGCGGCCCGCAAAGTCGTGATGCTCAGTTGTCAGACTACCCTTCTTTGGACTACCAAGGCCTCTACGTGACTTTGGTGACCCTCCTGGATCTAGTTCCTTTACTACAGCACGGCCAACACGATCTTGGACAGTCGATATTTTATACAACTACATGTTTGCTACCTTTTCTCAATGATGATATTCTGAGTACTTTGCCCTACACGATGATATCAACGTTGGCTACCTTTCCTCCATTTCTGCACAAGGATATCATTGAATATCTTAGCACATCTTTTCTACCAATGGCTATATGTGAGCCTCTGCACACCCAGTGA

CircID chr14:93467671|93542696
ORF Type ORF2
Protein Length 57
Nucleotide Length 171
Protein Sequence MVFQWFHSTAYMMDDEVGSLVEKLKPQFVTKWLKTVCDVRFDVMVMCLLPKPMEFAR
Nucleotide Sequence ATGGTGTTTCAGTGGTTTCACTCCACTGCGTATATGATGGATGATGAAGTGGGAAGTCTGGTGGAAAAGCTGAAGCCTCAGTTTGTCACCAAATGGCTGAAGACCGTATGTGATGTTCGCTTCGATGTCATGGTCATGTGCCTTCTTCCTAAACCCATGGAATTTGCCAGG

CircID chr14:93467671|93542696
ORF Type ORF3
Protein Length 98
Nucleotide Length 294
Protein Sequence LYKISTVQDRVGRAVVKELDPGGSPKSRRGLGSPKKGSLTTEHHDFAGRVLREHLAGRLTRSEKSISRCLQYLFLMVQDKCCGEPGYDIPASTGSWKQ
Nucleotide Sequence TTGTATAAAATATCGACTGTCCAAGATCGTGTTGGCCGTGCTGTAGTAAAGGAACTAGATCCAGGAGGGTCACCAAAGTCACGTAGAGGCCTTGGTAGTCCAAAGAAGGGTAGTCTGACAACTGAGCATCACGACTTTGCGGGCCGCGTTCTGAGGGAGCATCTCGCAGGACGCTTAACAAGGTCTGAGAAAAGTATTTCAAGGTGTTTGCAATATCTGTTCCTGATGGTACAGGATAAATGTTGTGGAGAACCCGGTTATGATATTCCTGCAAGTACCGGATCTTGGAAGCAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr14:93467671|93542696 FBL 1 0 0
chr14:93467671|93542696 NOP58 0 0 1
chr14:93467671|93542696 TAF15 3 0 0
chr14:93467671|93542696 FUS 1 0 0