CircRNA Information

General Information
circRNA Basic Information
CircID chr14:94111637|94114880
Strand +
CircType exon
Host Gene ENSG00000165949.11;
Algorism CIRI2;
Sequence CTCCTCCAATCACAACTGTAGCAATCCTGGCCAGGGGCAAAACTACGGCAGAGCCAGAGGCCACCCTGACCACTTTGGCCACACTGGTCACTGCTGATGAGGTGAGAGCAGAGGCCTCCATGCCTGCTCGGGTTAATTCCGTGGCCTAGAGAGTAAGAGATCCTCAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:94111637|94114880 hsa-miR-214-5p 0 0 1
chr14:94111637|94114880 hsa-miR-214-3p 0 0 1
chr14:94111637|94114880 hsa-miR-221-5p 0 0 1
chr14:94111637|94114880 hsa-miR-221-3p 0 0 1
chr14:94111637|94114880 hsa-miR-222-5p 0 0 1
chr14:94111637|94114880 hsa-miR-222-3p 0 0 1
chr14:94111637|94114880 hsa-miR-149-5p 0 0 1
chr14:94111637|94114880 hsa-miR-149-3p 0 0 1
chr14:94111637|94114880 hsa-miR-520g-5p 0 0 1
chr14:94111637|94114880 hsa-miR-520g-3p 0 0 1
chr14:94111637|94114880 hsa-miR-520h 0 0 1
chr14:94111637|94114880 hsa-miR-645 0 0 1
chr14:94111637|94114880 hsa-miR-650 0 0 1
chr14:94111637|94114880 hsa-miR-765 0 0 1
chr14:94111637|94114880 hsa-miR-760 1 0 1
chr14:94111637|94114880 hsa-miR-922 0 0 1
chr14:94111637|94114880 hsa-miR-1229-5p 0 0 1
chr14:94111637|94114880 hsa-miR-1229-3p 0 0 1
chr14:94111637|94114880 hsa-miR-663b 0 0 1
chr14:94111637|94114880 hsa-miR-1251-5p 0 0 1
chr14:94111637|94114880 hsa-miR-1251-3p 0 0 1
chr14:94111637|94114880 hsa-miR-139-5p 0 0 1
chr14:94111637|94114880 hsa-miR-1224-5p 0 0 1
chr14:94111637|94114880 hsa-miR-199a-5p 0 0 1
chr14:94111637|94114880 hsa-miR-509-3p 0 0 1
chr14:94111637|94114880 hsa-miR-331-3p 0 0 1
chr14:94111637|94114880 hsa-miR-767-3p 0 0 1
chr14:94111637|94114880 hsa-miR-582-5p 0 0 1
chr14:94111637|94114880 hsa-miR-199b-5p 0 0 1
chr14:94111637|94114880 hsa-miR-644 0 0 1
chr14:94111637|94114880 hsa-miR-768-5p 0 0 1
chr14:94111637|94114880 hsa-miR-1185 0 0 1
chr14:94111637|94114880 hsa-miR-608 1 0 0
chr14:94111637|94114880 hsa-miR-6069 1 0 0
chr14:94111637|94114880 hsa-miR-6860 1 0 0
chr14:94111637|94114880 hsa-miR-1843 1 0 0
chr14:94111637|94114880 hsa-miR-150-3p 1 0 0
chr14:94111637|94114880 hsa-miR-6806-5p 1 0 0
chr14:94111637|94114880 hsa-miR-6735-3p 1 0 0
chr14:94111637|94114880 hsa-miR-3944-3p 1 0 0
chr14:94111637|94114880 hsa-miR-4640-5p 1 0 0
chr14:94111637|94114880 hsa-miR-1908-5p 1 0 0
chr14:94111637|94114880 hsa-miR-4690-5p 1 0 0
chr14:94111637|94114880 hsa-miR-1295b-3p 1 0 0
chr14:94111637|94114880 hsa-miR-6895-3p 1 0 0
chr14:94111637|94114880 hsa-miR-1207-5p 1 0 0
chr14:94111637|94114880 hsa-miR-6842-5p 1 0 0
chr14:94111637|94114880 hsa-miR-6877-3p 1 0 0
chr14:94111637|94114880 hsa-miR-342-5p 1 0 0
chr14:94111637|94114880 hsa-miR-4756-5p 1 0 0
chr14:94111637|94114880 hsa-miR-664a-5p 1 0 0
chr14:94111637|94114880 hsa-miR-6824-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:94111637|94114880
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MARGKTTAEPEATLTTLATLVTADEVRAEASMPARVNSVA
Nucleotide Sequence CTGGCCAGGGGCAAAACTACGGCAGAGCCAGAGGCCACCCTGACCACTTTGGCCACACTGGTCACTGCTGATGAGGTGAGAGCAGAGGCCTCCATGCCTGCTCGGGTTAATTCCGTGGCCTAG

CircID chr14:94111637|94114880
ORF Type ORF2
Protein Length 55
Nucleotide Length 165
Protein Sequence LRISYSLGHGINPSRHGGLCSHLISSDQCGQSGQGGLWLCRSFAPGQDCYSCDWR
Nucleotide Sequence TTGAGGATCTCTTACTCTCTAGGCCACGGAATTAACCCGAGCAGGCATGGAGGCCTCTGCTCTCACCTCATCAGCAGTGACCAGTGTGGCCAAAGTGGTCAGGGTGGCCTCTGGCTCTGCCGTAGTTTTGCCCCTGGCCAGGATTGCTACAGTTGTGATTGGAGG

CircID chr14:94111637|94114880
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MEASALTSSAVTSVAKVVRVASGSAVVLPLARIATVVIGG
Nucleotide Sequence ATGGAGGCCTCTGCTCTCACCTCATCAGCAGTGACCAGTGTGGCCAAAGTGGTCAGGGTGGCCTCTGGCTCTGCCGTAGTTTTGCCCCTGGCCAGGATTGCTACAGTTGTGATTGGAGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites