CircRNA Information

General Information
circRNA Basic Information
CircID chr14:94379464|94380893
Strand -
CircType exon
Host Gene ENSG00000197249.11;
Algorism CIRI2;
Sequence CTTGGAGAGCTTCAGGGGTGCCTCCTCTGTGACCCCGGAGAGGTCAGCCCCATTGCTGAAGACCTTAGTGATGCCCAGTTGACCCAGGACGCTCTTCAGATCATAGGTTCCAGTAATGGACAGTTTGGGTAAATGTAAGCTGGCAGACCTTCTGTCTTCATTTTCCAGGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:94379464|94380893 hsa-miR-346 0 1 1
chr14:94379464|94380893 hsa-miR-493-5p 0 0 1
chr14:94379464|94380893 hsa-miR-493-3p 0 0 1
chr14:94379464|94380893 hsa-miR-545-5p 0 0 1
chr14:94379464|94380893 hsa-miR-545-3p 0 0 1
chr14:94379464|94380893 hsa-miR-612 1 0 1
chr14:94379464|94380893 hsa-miR-650 0 1 1
chr14:94379464|94380893 hsa-miR-1202 0 0 1
chr14:94379464|94380893 hsa-miR-1243 0 0 1
chr14:94379464|94380893 hsa-miR-548g-5p 0 0 1
chr14:94379464|94380893 hsa-miR-548g-3p 0 0 1
chr14:94379464|94380893 hsa-miR-127-5p 0 0 1
chr14:94379464|94380893 hsa-miR-875-3p 0 0 1
chr14:94379464|94380893 hsa-miR-34c-3p 0 0 1
chr14:94379464|94380893 hsa-miR-885-5p 0 0 1
chr14:94379464|94380893 hsa-miR-515-5p 0 0 1
chr14:94379464|94380893 hsa-miR-1285 0 0 1
chr14:94379464|94380893 hsa-miR-638 1 0 0
chr14:94379464|94380893 hsa-miR-649 0 1 0
chr14:94379464|94380893 hsa-miR-661 1 0 0
chr14:94379464|94380893 hsa-miR-4254 0 1 0
chr14:94379464|94380893 hsa-miR-3612 0 1 0
chr14:94379464|94380893 hsa-miR-4420 0 1 0
chr14:94379464|94380893 hsa-miR-6860 0 1 0
chr14:94379464|94380893 hsa-miR-12132 0 1 0
chr14:94379464|94380893 hsa-miR-6861-5p 1 0 0
chr14:94379464|94380893 hsa-miR-6796-3p 0 1 0
chr14:94379464|94380893 hsa-miR-185-3p 0 1 0
chr14:94379464|94380893 hsa-miR-6716-3p 0 1 0
chr14:94379464|94380893 hsa-miR-6821-3p 0 1 0
chr14:94379464|94380893 hsa-miR-331-3p 0 1 0
chr14:94379464|94380893 hsa-miR-4727-5p 0 1 0
chr14:94379464|94380893 hsa-miR-6800-3p 0 1 0
chr14:94379464|94380893 hsa-miR-3187-5p 1 0 0
chr14:94379464|94380893 hsa-miR-4646-5p 1 0 0
chr14:94379464|94380893 hsa-miR-4757-5p 0 1 0
chr14:94379464|94380893 hsa-miR-6503-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr14:94379464|94380893
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence LESFRGASSVTPERSAPLLKTLVMPS
Nucleotide Sequence TTGGAGAGCTTCAGGGGTGCCTCCTCTGTGACCCCGGAGAGGTCAGCCCCATTGCTGAAGACCTTAGTGATGCCCAGTTGA

CircID chr14:94379464|94380893
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MENEDRRSASLHLPKLSITGTYDLKSVLGQLGITKVFSNGADLSGVTEEAPLKLSK
Nucleotide Sequence CTGGAAAATGAAGACAGAAGGTCTGCCAGCTTACATTTACCCAAACTGTCCATTACTGGAACCTATGATCTGAAGAGCGTCCTGGGTCAACTGGGCATCACTAAGGTCTTCAGCAATGGGGCTGACCTCTCCGGGGTCACAGAGGAGGCACCCCTGAAGCTCTCCAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites