CircRNA Information

General Information
circRNA Basic Information
CircID chr14:94382938|94383238
Strand +
CircType exon
Host Gene ENSG00000197249.11;
Algorism CIRI2;
Sequence AATGCCGTCTTCTGTCTCGTGGGGCATCCTCCTGCTGGCAGGCCTGTGCTGCCTGGTCCCTGTCTCCCTGGCTGAGGATCCCCAGGGAGATGCTGCCCAGAAGACAGATACATCCCACCATGATCAGGATCACCCAACCTTCAACAAGATCACCCCCAACCTGGCTGAGTTCGCCTTCAGCCTATACCGCCAGCTGGCACACCAGTCCAACAGCACCAATATCTTCTTCTCCCCAGTGAGCATCGCTACAGCCTTTGCAATGCTCTCCCTGGGGACCAAGGCTGACACTCACGATGAAATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:94382938|94383238 hsa-miR-107 0 0 1
chr14:94382938|94383238 hsa-miR-214-5p 0 0 1
chr14:94382938|94383238 hsa-miR-214-3p 0 0 1
chr14:94382938|94383238 hsa-miR-133b 0 0 1
chr14:94382938|94383238 hsa-miR-493-5p 0 0 1
chr14:94382938|94383238 hsa-miR-493-3p 0 0 1
chr14:94382938|94383238 hsa-miR-527 0 0 1
chr14:94382938|94383238 hsa-miR-612 0 0 1
chr14:94382938|94383238 hsa-miR-653-5p 0 0 1
chr14:94382938|94383238 hsa-miR-653-3p 0 0 1
chr14:94382938|94383238 hsa-miR-541-5p 0 0 1
chr14:94382938|94383238 hsa-miR-541-3p 0 0 1
chr14:94382938|94383238 hsa-miR-939-5p 0 0 1
chr14:94382938|94383238 hsa-miR-939-3p 0 0 1
chr14:94382938|94383238 hsa-miR-1178-5p 0 0 1
chr14:94382938|94383238 hsa-miR-1178-3p 0 0 1
chr14:94382938|94383238 hsa-miR-1227-5p 0 0 1
chr14:94382938|94383238 hsa-miR-1227-3p 0 0 1
chr14:94382938|94383238 hsa-miR-1202 1 0 1
chr14:94382938|94383238 hsa-miR-1253 0 0 1
chr14:94382938|94383238 hsa-miR-1262 0 0 1
chr14:94382938|94383238 hsa-miR-1275 0 0 1
chr14:94382938|94383238 hsa-miR-1288-5p 0 0 1
chr14:94382938|94383238 hsa-miR-1288-3p 0 0 1
chr14:94382938|94383238 hsa-miR-512-5p 0 0 1
chr14:94382938|94383238 hsa-miR-574-5p 0 0 1
chr14:94382938|94383238 hsa-miR-654-5p 0 0 1
chr14:94382938|94383238 hsa-miR-1207-3p 0 0 1
chr14:94382938|94383238 hsa-miR-518a-5p 0 0 1
chr14:94382938|94383238 hsa-miR-103 0 0 1
chr14:94382938|94383238 hsa-miR-1269 0 0 1
chr14:94382938|94383238 hsa-miR-1285 0 0 1
chr14:94382938|94383238 hsa-miR-133a 0 0 1
chr14:94382938|94383238 hsa-miR-608 1 0 0
chr14:94382938|94383238 hsa-miR-638 1 0 0
chr14:94382938|94383238 hsa-miR-762 1 0 0
chr14:94382938|94383238 hsa-miR-1293 1 0 0
chr14:94382938|94383238 hsa-miR-1269a 1 0 0
chr14:94382938|94383238 hsa-miR-3147 1 0 0
chr14:94382938|94383238 hsa-miR-3185 1 0 0
chr14:94382938|94383238 hsa-miR-4270 1 0 0
chr14:94382938|94383238 hsa-miR-3907 1 0 0
chr14:94382938|94383238 hsa-miR-3916 1 0 0
chr14:94382938|94383238 hsa-miR-4483 1 0 0
chr14:94382938|94383238 hsa-miR-2392 1 0 0
chr14:94382938|94383238 hsa-miR-4507 1 0 0
chr14:94382938|94383238 hsa-miR-4515 1 0 0
chr14:94382938|94383238 hsa-miR-1269b 1 0 0
chr14:94382938|94383238 hsa-miR-1587 1 0 0
chr14:94382938|94383238 hsa-miR-4647 1 0 0
chr14:94382938|94383238 hsa-miR-4651 1 0 0
chr14:94382938|94383238 hsa-miR-4654 1 0 0
chr14:94382938|94383238 hsa-miR-4656 1 0 0
chr14:94382938|94383238 hsa-miR-4739 1 0 0
chr14:94382938|94383238 hsa-miR-4784 1 0 0
chr14:94382938|94383238 hsa-miR-5787 1 0 0
chr14:94382938|94383238 hsa-miR-8089 1 0 0
chr14:94382938|94383238 hsa-miR-138-5p 1 0 0
chr14:94382938|94383238 hsa-miR-7106-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6825-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4687-3p 1 0 0
chr14:94382938|94383238 hsa-miR-6728-5p 1 0 0
chr14:94382938|94383238 hsa-miR-8071 1 0 0
chr14:94382938|94383238 hsa-miR-6089 1 0 0
chr14:94382938|94383238 hsa-miR-6880-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4695-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6746-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4709-3p 1 0 0
chr14:94382938|94383238 hsa-miR-4722-5p 1 0 0
chr14:94382938|94383238 hsa-miR-593-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6741-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6742-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6772-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6732-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6810-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6835-5p 1 0 0
chr14:94382938|94383238 hsa-miR-7109-5p 1 0 0
chr14:94382938|94383238 hsa-miR-1226-5p 1 0 0
chr14:94382938|94383238 hsa-miR-3944-3p 1 0 0
chr14:94382938|94383238 hsa-miR-4640-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6753-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4787-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4776-5p 1 0 0
chr14:94382938|94383238 hsa-miR-598-5p 1 0 0
chr14:94382938|94383238 hsa-miR-5089-5p 1 0 0
chr14:94382938|94383238 hsa-miR-1207-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4763-3p 1 0 0
chr14:94382938|94383238 hsa-miR-6769b-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6812-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6870-5p 1 0 0
chr14:94382938|94383238 hsa-miR-5001-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6737-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6752-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6756-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6803-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6842-5p 1 0 0
chr14:94382938|94383238 hsa-miR-7110-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6751-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6763-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6808-5p 1 0 0
chr14:94382938|94383238 hsa-miR-3620-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6836-5p 1 0 0
chr14:94382938|94383238 hsa-miR-1909-3p 1 0 0
chr14:94382938|94383238 hsa-miR-3689a-3p 1 0 0
chr14:94382938|94383238 hsa-miR-449c-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4632-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4701-3p 1 0 0
chr14:94382938|94383238 hsa-miR-6729-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6795-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6856-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4700-5p 1 0 0
chr14:94382938|94383238 hsa-miR-3679-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4472 1 0 0
chr14:94382938|94383238 hsa-miR-6766-5p 1 0 0
chr14:94382938|94383238 hsa-miR-4667-5p 1 0 0
chr14:94382938|94383238 hsa-miR-6762-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr14:94382938|94383238
ORF Type ORF1
Protein Length 100
Nucleotide Length 300
Protein Sequence MPSSVSWGILLLAGLCCLVPVSLAEDPQGDAAQKTDTSHHDQDHPTFNKITPNLAEFAFSLYRQLAHQSNSTNIFFSPVSIATAFAMLSLGTKADTHDEI
Nucleotide Sequence ATGCCGTCTTCTGTCTCGTGGGGCATCCTCCTGCTGGCAGGCCTGTGCTGCCTGGTCCCTGTCTCCCTGGCTGAGGATCCCCAGGGAGATGCTGCCCAGAAGACAGATACATCCCACCATGATCAGGATCACCCAACCTTCAACAAGATCACCCCCAACCTGGCTGAGTTCGCCTTCAGCCTATACCGCCAGCTGGCACACCAGTCCAACAGCACCAATATCTTCTTCTCCCCAGTGAGCATCGCTACAGCCTTTGCAATGCTCTCCCTGGGGACCAAGGCTGACACTCACGATGAAATC
CircID chr14:94382938|94383238
ORF Type ORF2
Protein Length 75
Nucleotide Length 228
Protein Sequence MSRGASSCWQACAAWSLSPWLRIPREMLPRRQIHPTMIRITQPSTRSPPTWLSSPSAYTASWHTSPTAPISSSPQ
Nucleotide Sequence CTGTCTCGTGGGGCATCCTCCTGCTGGCAGGCCTGTGCTGCCTGGTCCCTGTCTCCCTGGCTGAGGATCCCCAGGGAGATGCTGCCCAGAAGACAGATACATCCCACCATGATCAGGATCACCCAACCTTCAACAAGATCACCCCCAACCTGGCTGAGTTCGCCTTCAGCCTATACCGCCAGCTGGCACACCAGTCCAACAGCACCAATATCTTCTTCTCCCCAGTGA
CircID chr14:94382938|94383238
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MIMVGCICLLGSISLGILSQGDRDQAAQACQQEDAPRDRRRH
Nucleotide Sequence CTGATCATGGTGGGATGTATCTGTCTTCTGGGCAGCATCTCCCTGGGGATCCTCAGCCAGGGAGACAGGGACCAGGCAGCACAGGCCTGCCAGCAGGAGGATGCCCCACGAGACAGAAGACGGCAT
CircID chr14:94382938|94383238
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MVPRESIAKAVAMLTGEKKILVLLDWCASWRYRLKANSARLGVILLKVG
Nucleotide Sequence TTGGTCCCCAGGGAGAGCATTGCAAAGGCTGTAGCGATGCTCACTGGGGAGAAGAAGATATTGGTGCTGTTGGACTGGTGTGCCAGCTGGCGGTATAGGCTGAAGGCGAACTCAGCCAGGTTGGGGGTGATCTTGTTGAAGGTTGGGTGA
CircID chr14:94382938|94383238
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MGDPDHGGMYLSSGQHLPGDPQPGRQGPGSTGLPAGGCPTRQKTA
Nucleotide Sequence TTGGGTGATCCTGATCATGGTGGGATGTATCTGTCTTCTGGGCAGCATCTCCCTGGGGATCCTCAGCCAGGGAGACAGGGACCAGGCAGCACAGGCCTGCCAGCAGGAGGATGCCCCACGAGACAGAAGACGGCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab