CircRNA Information

General Information
circRNA Basic Information
CircID chr14:95550271|95550389
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTGGCCTGGCCACCTGTCCGCACAACACACGGGGCCCAGGAGGCTTTCCCTGGCATCATTTGCAAGGAGGCATCATTTGCATTCACCTTCCATTTGTCTGACCTCAGAGGTGGGACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:95550271|95550389 hsa-miR-210-5p 0 0 1
chr14:95550271|95550389 hsa-miR-210-3p 0 0 1
chr14:95550271|95550389 hsa-miR-527 0 0 1
chr14:95550271|95550389 hsa-miR-552-5p 0 0 1
chr14:95550271|95550389 hsa-miR-552-3p 0 0 1
chr14:95550271|95550389 hsa-miR-147b-5p 0 0 1
chr14:95550271|95550389 hsa-miR-147b-3p 0 0 1
chr14:95550271|95550389 hsa-miR-1257 0 0 1
chr14:95550271|95550389 hsa-miR-1322 0 0 1
chr14:95550271|95550389 hsa-miR-1324 0 0 1
chr14:95550271|95550389 hsa-miR-296-5p 0 0 1
chr14:95550271|95550389 hsa-miR-1224-3p 0 0 1
chr14:95550271|95550389 hsa-miR-502-5p 0 0 1
chr14:95550271|95550389 hsa-miR-518a-5p 0 0 1
chr14:95550271|95550389 hsa-miR-1260 0 0 1
chr14:95550271|95550389 hsa-miR-1280 0 0 1
chr14:95550271|95550389 hsa-miR-1260a 0 1 0
chr14:95550271|95550389 hsa-miR-1321 1 0 0
chr14:95550271|95550389 hsa-miR-1471 1 0 0
chr14:95550271|95550389 hsa-miR-2861 1 0 0
chr14:95550271|95550389 hsa-miR-3153 0 1 0
chr14:95550271|95550389 hsa-miR-3165 1 1 0
chr14:95550271|95550389 hsa-miR-1260b 0 1 0
chr14:95550271|95550389 hsa-miR-4734 1 0 0
chr14:95550271|95550389 hsa-miR-4754 1 1 0
chr14:95550271|95550389 hsa-miR-12119 0 1 0
chr14:95550271|95550389 hsa-miR-6836-3p 1 1 0
chr14:95550271|95550389 hsa-miR-6089 1 0 0
chr14:95550271|95550389 hsa-miR-6841-3p 0 1 0
chr14:95550271|95550389 hsa-miR-30b-3p 1 1 0
chr14:95550271|95550389 hsa-miR-5006-5p 0 1 0
chr14:95550271|95550389 hsa-miR-6850-5p 1 0 0
chr14:95550271|95550389 hsa-miR-7109-3p 0 1 0
chr14:95550271|95550389 hsa-miR-1343-3p 0 1 0
chr14:95550271|95550389 hsa-miR-939-3p 0 1 0
chr14:95550271|95550389 hsa-miR-3677-3p 1 0 0
chr14:95550271|95550389 hsa-miR-7854-3p 0 1 0
chr14:95550271|95550389 hsa-miR-7162-3p 0 1 0
chr14:95550271|95550389 hsa-miR-5088-3p 1 0 0
chr14:95550271|95550389 hsa-miR-6812-5p 1 0 0
chr14:95550271|95550389 hsa-miR-6743-5p 1 0 0
chr14:95550271|95550389 hsa-miR-6815-5p 0 1 0
chr14:95550271|95550389 hsa-miR-6879-5p 1 0 0
chr14:95550271|95550389 hsa-miR-675-5p 1 0 0
chr14:95550271|95550389 hsa-miR-6883-5p 1 0 0
chr14:95550271|95550389 hsa-miR-6791-3p 1 1 0
chr14:95550271|95550389 hsa-miR-6724-5p 1 0 0
chr14:95550271|95550389 hsa-miR-10400-3p 1 0 0
chr14:95550271|95550389 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr14:95550271|95550389
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MSAQHTGPRRLSLASFARRHHLHSPSICLTSEVG
Nucleotide Sequence CTGTCCGCACAACACACGGGGCCCAGGAGGCTTTCCCTGGCATCATTTGCAAGGAGGCATCATTTGCATTCACCTTCCATTTGTCTGACCTCAGAGGTGGGA

CircID chr14:95550271|95550389
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MATCPHNTRGPGGFPWHHLQGGIICIHLPFV
Nucleotide Sequence CTGGCCACCTGTCCGCACAACACACGGGGCCCAGGAGGCTTTCCCTGGCATCATTTGCAAGGAGGCATCATTTGCATTCACCTTCCATTTGTCTGA

CircID chr14:95550271|95550389
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence LAWPPVRTTHGAQEAFPGIICKEASFAFTFHLSDLRGGT
Nucleotide Sequence CTGGCCTGGCCACCTGTCCGCACAACACACGGGGCCCAGGAGGCTTTCCCTGGCATCATTTGCAAGGAGGCATCATTTGCATTCACCTTCCATTTGTCTGACCTCAGAGGTGGGACC

CircID chr14:95550271|95550389
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MRSDKWKVNANDASLQMMPGKASWAPCVVRTGGQAR
Nucleotide Sequence CTGAGGTCAGACAAATGGAAGGTGAATGCAAATGATGCCTCCTTGCAAATGATGCCAGGGAAAGCCTCCTGGGCCCCGTGTGTTGTGCGGACAGGTGGCCAGGCCAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites