CircRNA Information

General Information
circRNA Basic Information
CircID chr14:99514116|99514302
Strand -
CircType exon
Host Gene ENSG00000205476.7;
Algorism CIRI2;
Sequence GCCCCCTCAGTGAGGACCCCTGCCCTGTGGCGCTGGATGACCTGGAGCCATAAGCATGGCCGAAAAGGAACCTCAGAGACCTGTTTCCACCAAGAGCCCAGACAGGCTGAGTGAACTGCTAAAGGTCACACCACAAACTAAAGGCAGAACCTGGCCAGACACGCTCCTTCCCAAAAAGAACAGAACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr14:99514116|99514302 hsa-miR-187-5p 0 0 1
chr14:99514116|99514302 hsa-miR-187-3p 0 0 1
chr14:99514116|99514302 hsa-miR-135b-5p 0 0 1
chr14:99514116|99514302 hsa-miR-135b-3p 0 0 1
chr14:99514116|99514302 hsa-miR-593-5p 0 0 1
chr14:99514116|99514302 hsa-miR-593-3p 0 0 1
chr14:99514116|99514302 hsa-miR-612 1 0 1
chr14:99514116|99514302 hsa-miR-1231 0 1 1
chr14:99514116|99514302 hsa-miR-512-5p 1 1 1
chr14:99514116|99514302 hsa-miR-615-5p 0 1 1
chr14:99514116|99514302 hsa-miR-423-5p 0 0 1
chr14:99514116|99514302 hsa-miR-1207-5p 1 0 1
chr14:99514116|99514302 hsa-miR-220c 0 0 1
chr14:99514116|99514302 hsa-miR-1285 0 0 1
chr14:99514116|99514302 hsa-miR-135a 0 0 1
chr14:99514116|99514302 hsa-miR-762 1 0 0
chr14:99514116|99514302 hsa-miR-1268a 1 0 0
chr14:99514116|99514302 hsa-miR-3921 0 1 0
chr14:99514116|99514302 hsa-miR-1268b 1 0 0
chr14:99514116|99514302 hsa-miR-4533 1 1 0
chr14:99514116|99514302 hsa-miR-4674 1 0 0
chr14:99514116|99514302 hsa-miR-4739 1 0 0
chr14:99514116|99514302 hsa-miR-6069 1 0 0
chr14:99514116|99514302 hsa-miR-6090 1 0 0
chr14:99514116|99514302 hsa-miR-6745 1 1 0
chr14:99514116|99514302 hsa-miR-6860 1 0 0
chr14:99514116|99514302 hsa-miR-12127 1 0 0
chr14:99514116|99514302 hsa-miR-214-5p 0 1 0
chr14:99514116|99514302 hsa-miR-7106-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6825-5p 1 0 0
chr14:99514116|99514302 hsa-miR-4687-3p 1 0 0
chr14:99514116|99514302 hsa-miR-6799-5p 1 0 0
chr14:99514116|99514302 hsa-miR-7160-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6741-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6727-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6721-5p 1 1 0
chr14:99514116|99514302 hsa-miR-3180-3p 1 0 0
chr14:99514116|99514302 hsa-miR-4793-5p 1 1 0
chr14:99514116|99514302 hsa-miR-1229-5p 1 0 0
chr14:99514116|99514302 hsa-miR-4640-5p 1 0 0
chr14:99514116|99514302 hsa-miR-1228-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6771-5p 1 0 0
chr14:99514116|99514302 hsa-miR-4743-3p 1 0 0
chr14:99514116|99514302 hsa-miR-149-3p 1 0 0
chr14:99514116|99514302 hsa-miR-6824-5p 1 0 0
chr14:99514116|99514302 hsa-miR-3190-5p 0 1 0
chr14:99514116|99514302 hsa-miR-3120-5p 0 1 0
chr14:99514116|99514302 hsa-miR-6759-3p 0 1 0
chr14:99514116|99514302 hsa-miR-4763-3p 1 1 0
chr14:99514116|99514302 hsa-miR-6787-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6775-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6743-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6819-5p 1 0 0
chr14:99514116|99514302 hsa-miR-1249-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6722-3p 1 1 0
chr14:99514116|99514302 hsa-miR-6763-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6779-5p 1 1 0
chr14:99514116|99514302 hsa-miR-6780a-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6797-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6879-5p 0 1 0
chr14:99514116|99514302 hsa-miR-7111-5p 1 0 0
chr14:99514116|99514302 hsa-miR-5189-5p 1 0 0
chr14:99514116|99514302 hsa-miR-5196-5p 1 1 0
chr14:99514116|99514302 hsa-miR-6780b-5p 1 0 0
chr14:99514116|99514302 hsa-miR-4725-3p 1 0 0
chr14:99514116|99514302 hsa-miR-6858-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6883-5p 1 0 0
chr14:99514116|99514302 hsa-miR-1914-3p 1 0 0
chr14:99514116|99514302 hsa-miR-4747-5p 1 1 0
chr14:99514116|99514302 hsa-miR-6876-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6766-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6785-5p 1 0 0
chr14:99514116|99514302 hsa-miR-6790-5p 1 0 0
chr14:99514116|99514302 hsa-miR-10400-3p 1 1 0
chr14:99514116|99514302 hsa-miR-5195-3p 1 0 0
chr14:99514116|99514302 hsa-miR-5699-3p 0 1 0
chr14:99514116|99514302 hsa-miR-4524b-5p 1 0 0
chr14:99514116|99514302 hsa-miR-147b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr14:99514116|99514302
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MWRWMTWSHKHGRKGTSETCFHQEPRQAE
Nucleotide Sequence CTGTGGCGCTGGATGACCTGGAGCCATAAGCATGGCCGAAAAGGAACCTCAGAGACCTGTTTCCACCAAGAGCCCAGACAGGCTGAGTGA
CircID chr14:99514116|99514302
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MAEKEPQRPVSTKSPDRLSELLKVTPQTKGRTWPDTLLPKKNRT
Nucleotide Sequence ATGGCCGAAAAGGAACCTCAGAGACCTGTTTCCACCAAGAGCCCAGACAGGCTGAGTGAACTGCTAAAGGTCACACCACAAACTAAAGGCAGAACCTGGCCAGACACGCTCCTTCCCAAAAAGAACAGAACT
CircID chr14:99514116|99514302
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MRFLFGHAYGSRSSSATGQGSSLRG
Nucleotide Sequence CTGAGGTTCCTTTTCGGCCATGCTTATGGCTCCAGGTCATCCAGCGCCACAGGGCAGGGGTCCTCACTGAGGGGG
CircID chr14:99514116|99514302
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MFFLGRSVSGQVLPLVCGVTFSSSLSLSGLLVETGL
Nucleotide Sequence CTGTTCTTTTTGGGAAGGAGCGTGTCTGGCCAGGTTCTGCCTTTAGTTTGTGGTGTGACCTTTAGCAGTTCACTCAGCCTGTCTGGGCTCTTGGTGGAAACAGGTCTCTGA
CircID chr14:99514116|99514302
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MGSWWKQVSEVPFRPCLWLQVIQRHRAGVLTEG
Nucleotide Sequence CTGGGCTCTTGGTGGAAACAGGTCTCTGAGGTTCCTTTTCGGCCATGCTTATGGCTCCAGGTCATCCAGCGCCACAGGGCAGGGGTCCTCACTGAGGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab