CircRNA Information

General Information
circRNA Basic Information
CircID chr15:100893672|100893867
Strand +
CircType exon
Host Gene ENSG00000259583.2;
Algorism CIRI2;
Sequence TTGCTTTTCATGGTCTGGATTTGGGGTATGTGGGGTAACATAGGAGTGTGCAATGATCAGAACTGCAATCCTGCACAGCACTTCCTAAACTGCATTCTGGGTGGTACTAATAGGCAGCCTTTGCAAAGAGGATGCTGTTGCATGTGTTCTACCTCTCCCTCTAAAACATCTGCTGAAGACGTGTCCTCCTCCCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:100893672|100893867 hsa-let-7b-5p 0 0 1
chr15:100893672|100893867 hsa-let-7b-3p 0 0 1
chr15:100893672|100893867 hsa-let-7c-5p 0 0 1
chr15:100893672|100893867 hsa-let-7c-3p 0 0 1
chr15:100893672|100893867 hsa-let-7d-5p 0 0 1
chr15:100893672|100893867 hsa-let-7d-3p 0 0 1
chr15:100893672|100893867 hsa-let-7e-5p 0 0 1
chr15:100893672|100893867 hsa-let-7e-3p 0 0 1
chr15:100893672|100893867 hsa-miR-25-5p 0 0 1
chr15:100893672|100893867 hsa-miR-25-3p 0 0 1
chr15:100893672|100893867 hsa-miR-32-5p 0 0 1
chr15:100893672|100893867 hsa-miR-32-3p 0 0 1
chr15:100893672|100893867 hsa-miR-98-5p 0 0 1
chr15:100893672|100893867 hsa-miR-98-3p 0 0 1
chr15:100893672|100893867 hsa-miR-214-5p 0 0 1
chr15:100893672|100893867 hsa-miR-214-3p 0 0 1
chr15:100893672|100893867 hsa-let-7g-5p 0 0 1
chr15:100893672|100893867 hsa-let-7g-3p 0 0 1
chr15:100893672|100893867 hsa-let-7i-5p 0 0 1
chr15:100893672|100893867 hsa-let-7i-3p 0 0 1
chr15:100893672|100893867 hsa-miR-302a-5p 0 0 1
chr15:100893672|100893867 hsa-miR-302a-3p 0 0 1
chr15:100893672|100893867 hsa-miR-363-5p 0 0 1
chr15:100893672|100893867 hsa-miR-363-3p 0 0 1
chr15:100893672|100893867 hsa-miR-302b-5p 0 0 1
chr15:100893672|100893867 hsa-miR-302b-3p 0 0 1
chr15:100893672|100893867 hsa-miR-302c-5p 0 0 1
chr15:100893672|100893867 hsa-miR-302c-3p 0 0 1
chr15:100893672|100893867 hsa-miR-302d-5p 0 0 1
chr15:100893672|100893867 hsa-miR-302d-3p 0 0 1
chr15:100893672|100893867 hsa-miR-367-5p 0 0 1
chr15:100893672|100893867 hsa-miR-367-3p 0 0 1
chr15:100893672|100893867 hsa-miR-372-5p 0 0 1
chr15:100893672|100893867 hsa-miR-372-3p 0 0 1
chr15:100893672|100893867 hsa-miR-373-5p 0 0 1
chr15:100893672|100893867 hsa-miR-373-3p 0 0 1
chr15:100893672|100893867 hsa-miR-520e-5p 0 0 1
chr15:100893672|100893867 hsa-miR-520e-3p 0 0 1
chr15:100893672|100893867 hsa-miR-520b-5p 0 0 1
chr15:100893672|100893867 hsa-miR-520b-3p 0 0 1
chr15:100893672|100893867 hsa-miR-527 0 0 1
chr15:100893672|100893867 hsa-miR-92b-5p 0 0 1
chr15:100893672|100893867 hsa-miR-92b-3p 0 0 1
chr15:100893672|100893867 hsa-miR-591 0 0 1
chr15:100893672|100893867 hsa-miR-651-5p 0 0 1
chr15:100893672|100893867 hsa-miR-651-3p 0 0 1
chr15:100893672|100893867 hsa-miR-765 0 0 1
chr15:100893672|100893867 hsa-miR-877-5p 0 0 1
chr15:100893672|100893867 hsa-miR-877-3p 0 0 1
chr15:100893672|100893867 hsa-miR-922 0 0 1
chr15:100893672|100893867 hsa-miR-1286 0 0 1
chr15:100893672|100893867 hsa-miR-1303 0 0 1
chr15:100893672|100893867 hsa-miR-302e 0 0 1
chr15:100893672|100893867 hsa-miR-1321 0 1 1
chr15:100893672|100893867 hsa-miR-1197 0 0 1
chr15:100893672|100893867 hsa-miR-512-3p 0 1 1
chr15:100893672|100893867 hsa-miR-483-3p 0 0 1
chr15:100893672|100893867 hsa-miR-520d-3p 0 0 1
chr15:100893672|100893867 hsa-miR-518a-5p 0 0 1
chr15:100893672|100893867 hsa-miR-520a-3p 0 0 1
chr15:100893672|100893867 hsa-miR-520c-3p 0 0 1
chr15:100893672|100893867 hsa-miR-450b-5p 0 0 1
chr15:100893672|100893867 hsa-let-7a 0 0 1
chr15:100893672|100893867 hsa-let-7f 0 0 1
chr15:100893672|100893867 hsa-miR-92a 0 0 1
chr15:100893672|100893867 hsa-miR-3175 1 0 0
chr15:100893672|100893867 hsa-miR-4277 0 1 0
chr15:100893672|100893867 hsa-miR-4441 0 1 0
chr15:100893672|100893867 hsa-miR-4510 1 1 0
chr15:100893672|100893867 hsa-miR-4739 1 1 0
chr15:100893672|100893867 hsa-miR-6127 1 1 0
chr15:100893672|100893867 hsa-miR-6133 1 1 0
chr15:100893672|100893867 hsa-miR-6165 1 0 0
chr15:100893672|100893867 hsa-miR-8085 0 1 0
chr15:100893672|100893867 hsa-miR-11401 0 1 0
chr15:100893672|100893867 hsa-miR-105-3p 1 0 0
chr15:100893672|100893867 hsa-miR-504-3p 0 1 0
chr15:100893672|100893867 hsa-miR-3150a-3p 1 0 0
chr15:100893672|100893867 hsa-miR-7106-5p 1 1 0
chr15:100893672|100893867 hsa-miR-6825-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6894-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6510-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6515-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6873-5p 0 1 0
chr15:100893672|100893867 hsa-miR-7847-3p 1 0 0
chr15:100893672|100893867 hsa-miR-7154-3p 0 1 0
chr15:100893672|100893867 hsa-miR-656-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6760-5p 1 1 0
chr15:100893672|100893867 hsa-miR-6740-5p 1 0 0
chr15:100893672|100893867 hsa-miR-149-3p 1 0 0
chr15:100893672|100893867 hsa-let-7f-5p 0 1 0
chr15:100893672|100893867 hsa-miR-6778-5p 1 0 0
chr15:100893672|100893867 hsa-miR-11181-3p 0 1 0
chr15:100893672|100893867 hsa-miR-1249-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6722-3p 1 0 0
chr15:100893672|100893867 hsa-miR-6797-5p 1 0 0
chr15:100893672|100893867 hsa-miR-7111-5p 1 1 0
chr15:100893672|100893867 hsa-miR-4728-5p 1 0 0
chr15:100893672|100893867 hsa-miR-5196-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6738-5p 1 1 0
chr15:100893672|100893867 hsa-miR-6794-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6795-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6887-5p 1 0 0
chr15:100893672|100893867 hsa-miR-6831-5p 0 1 0
chr15:100893672|100893867 hsa-miR-6731-5p 0 1 0
chr15:100893672|100893867 hsa-miR-4665-5p 1 0 0
chr15:100893672|100893867 hsa-miR-3679-5p 1 0 0
chr15:100893672|100893867 hsa-miR-4756-5p 0 1 0
chr15:100893672|100893867 hsa-miR-1295b-5p 0 1 0
chr15:100893672|100893867 hsa-miR-6874-3p 0 1 0
chr15:100893672|100893867 hsa-miR-1912-5p 0 1 0
chr15:100893672|100893867 hsa-miR-1912-3p 0 1 0
chr15:100893672|100893867 hsa-miR-147b-3p 0 1 0
chr15:100893672|100893867 hsa-miR-148b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:100893672|100893867
ORF Type ORF1
Protein Length 65
Nucleotide Length 195
Protein Sequence LLFMVWIWGMWGNIGVCNDQNCNPAQHFLNCILGGTNRQPLQRGCCCMCSTSPSKTSAEDVSSSL
Nucleotide Sequence TTGCTTTTCATGGTCTGGATTTGGGGTATGTGGGGTAACATAGGAGTGTGCAATGATCAGAACTGCAATCCTGCACAGCACTTCCTAAACTGCATTCTGGGTGGTACTAATAGGCAGCCTTTGCAAAGAGGATGCTGTTGCATGTGTTCTACCTCTCCCTCTAAAACATCTGCTGAAGACGTGTCCTCCTCCCTG
CircID chr15:100893672|100893867
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MCRIAVLIIAHSYVTPHTPNPDHEKQ
Nucleotide Sequence CTGTGCAGGATTGCAGTTCTGATCATTGCACACTCCTATGTTACCCCACATACCCCAAATCCAGACCATGAAAAGCAA
CircID chr15:100893672|100893867
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MQQHPLCKGCLLVPPRMQFRKCCAGLQF
Nucleotide Sequence ATGCAACAGCATCCTCTTTGCAAAGGCTGCCTATTAGTACCACCCAGAATGCAGTTTAGGAAGTGCTGTGCAGGATTGCAGTTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab