CircRNA Information

General Information
circRNA Basic Information
CircID chr15:100977551|100977749
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence ATGCATTCCCCATCTAACTAGGGCAGAATTGAAGCAGGCCTAGAGGAGAACCTGAAGTCCCAACGCTGCCCAGCAATAGCAAGGAGCCCCTGCTTACTGGGTGTCAACTGATTCTAAGTACAGCCCCCAGATTTCCACCCCACCAGGCAGCAATGAAGGGGCATCCCTGTTTACCCACCAGAGTGGCGTCAGAGGAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:100977551|100977749 hsa-miR-30a-5p 0 0 1
chr15:100977551|100977749 hsa-miR-30a-3p 0 0 1
chr15:100977551|100977749 hsa-miR-30d-5p 0 0 1
chr15:100977551|100977749 hsa-miR-30d-3p 0 0 1
chr15:100977551|100977749 hsa-miR-205-5p 0 0 1
chr15:100977551|100977749 hsa-miR-205-3p 0 0 1
chr15:100977551|100977749 hsa-miR-30b-5p 0 0 1
chr15:100977551|100977749 hsa-miR-30b-3p 0 0 1
chr15:100977551|100977749 hsa-miR-137-5p 0 0 1
chr15:100977551|100977749 hsa-miR-137-3p 0 0 1
chr15:100977551|100977749 hsa-miR-30e-5p 0 0 1
chr15:100977551|100977749 hsa-miR-30e-3p 0 0 1
chr15:100977551|100977749 hsa-miR-555 0 0 1
chr15:100977551|100977749 hsa-miR-608 1 0 1
chr15:100977551|100977749 hsa-miR-612 1 1 1
chr15:100977551|100977749 hsa-miR-637 1 1 1
chr15:100977551|100977749 hsa-miR-645 0 0 1
chr15:100977551|100977749 hsa-miR-661 0 0 1
chr15:100977551|100977749 hsa-miR-541-5p 0 0 1
chr15:100977551|100977749 hsa-miR-541-3p 0 0 1
chr15:100977551|100977749 hsa-miR-885-3p 0 0 1
chr15:100977551|100977749 hsa-miR-654-5p 0 0 1
chr15:100977551|100977749 hsa-miR-502-5p 1 1 1
chr15:100977551|100977749 hsa-miR-324-3p 0 0 1
chr15:100977551|100977749 hsa-miR-342-5p 0 0 1
chr15:100977551|100977749 hsa-miR-1302 0 0 1
chr15:100977551|100977749 hsa-miR-30c 0 0 1
chr15:100977551|100977749 hsa-miR-1285 0 0 1
chr15:100977551|100977749 hsa-miR-514 0 0 1
chr15:100977551|100977749 hsa-miR-1254 0 0 1
chr15:100977551|100977749 hsa-miR-657 1 0 0
chr15:100977551|100977749 hsa-miR-762 1 0 0
chr15:100977551|100977749 hsa-miR-760 1 0 0
chr15:100977551|100977749 hsa-miR-920 1 0 0
chr15:100977551|100977749 hsa-miR-1293 1 0 0
chr15:100977551|100977749 hsa-miR-1270 0 1 0
chr15:100977551|100977749 hsa-miR-3147 1 0 0
chr15:100977551|100977749 hsa-miR-4279 0 1 0
chr15:100977551|100977749 hsa-miR-3909 1 1 0
chr15:100977551|100977749 hsa-miR-4425 0 1 0
chr15:100977551|100977749 hsa-miR-4447 1 0 0
chr15:100977551|100977749 hsa-miR-4448 1 1 0
chr15:100977551|100977749 hsa-miR-4489 1 0 0
chr15:100977551|100977749 hsa-miR-4498 1 0 0
chr15:100977551|100977749 hsa-miR-4505 1 0 0
chr15:100977551|100977749 hsa-miR-4507 1 0 0
chr15:100977551|100977749 hsa-miR-4508 1 0 0
chr15:100977551|100977749 hsa-miR-4651 1 0 0
chr15:100977551|100977749 hsa-miR-4656 1 0 0
chr15:100977551|100977749 hsa-miR-4660 1 0 0
chr15:100977551|100977749 hsa-miR-4675 1 1 0
chr15:100977551|100977749 hsa-miR-4683 1 0 0
chr15:100977551|100977749 hsa-miR-4734 1 0 0
chr15:100977551|100977749 hsa-miR-4741 1 1 0
chr15:100977551|100977749 hsa-miR-5572 1 0 0
chr15:100977551|100977749 hsa-miR-6085 1 0 0
chr15:100977551|100977749 hsa-miR-6745 1 1 0
chr15:100977551|100977749 hsa-miR-6860 0 1 0
chr15:100977551|100977749 hsa-miR-8089 1 0 0
chr15:100977551|100977749 hsa-miR-138-5p 0 1 0
chr15:100977551|100977749 hsa-miR-370-3p 1 1 0
chr15:100977551|100977749 hsa-miR-4731-5p 1 0 0
chr15:100977551|100977749 hsa-miR-500b-3p 0 1 0
chr15:100977551|100977749 hsa-miR-6861-5p 1 1 0
chr15:100977551|100977749 hsa-miR-4687-3p 1 0 0
chr15:100977551|100977749 hsa-miR-8071 1 0 0
chr15:100977551|100977749 hsa-miR-3189-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6776-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6742-5p 1 1 0
chr15:100977551|100977749 hsa-miR-3151-5p 1 0 0
chr15:100977551|100977749 hsa-miR-3180-3p 1 0 0
chr15:100977551|100977749 hsa-miR-6796-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6829-5p 1 0 0
chr15:100977551|100977749 hsa-miR-656-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6782-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6821-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6786-5p 1 0 0
chr15:100977551|100977749 hsa-miR-149-3p 1 0 0
chr15:100977551|100977749 hsa-miR-6789-5p 1 0 0
chr15:100977551|100977749 hsa-miR-597-3p 0 1 0
chr15:100977551|100977749 hsa-miR-6792-5p 1 1 0
chr15:100977551|100977749 hsa-miR-3157-3p 0 1 0
chr15:100977551|100977749 hsa-miR-514a-5p 0 1 0
chr15:100977551|100977749 hsa-miR-652-3p 1 0 0
chr15:100977551|100977749 hsa-miR-514a-3p 0 1 0
chr15:100977551|100977749 hsa-miR-10400-5p 1 0 0
chr15:100977551|100977749 hsa-miR-4763-3p 1 0 0
chr15:100977551|100977749 hsa-miR-6769b-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6812-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6870-5p 1 0 0
chr15:100977551|100977749 hsa-miR-5001-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6726-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6737-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6752-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6756-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6769a-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6803-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6813-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6819-5p 1 1 0
chr15:100977551|100977749 hsa-miR-7107-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6751-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6774-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6797-5p 1 0 0
chr15:100977551|100977749 hsa-miR-3127-3p 1 1 0
chr15:100977551|100977749 hsa-miR-3620-5p 1 0 0
chr15:100977551|100977749 hsa-miR-5189-5p 1 0 0
chr15:100977551|100977749 hsa-miR-1909-3p 0 1 0
chr15:100977551|100977749 hsa-miR-4632-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6846-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6848-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6858-5p 1 0 0
chr15:100977551|100977749 hsa-miR-3187-5p 1 1 0
chr15:100977551|100977749 hsa-miR-4697-5p 1 0 0
chr15:100977551|100977749 hsa-miR-365b-5p 1 1 0
chr15:100977551|100977749 hsa-miR-4665-5p 1 0 0
chr15:100977551|100977749 hsa-miR-6855-5p 1 0 0
chr15:100977551|100977749 hsa-miR-2682-3p 1 1 0
chr15:100977551|100977749 hsa-miR-6756-3p 0 1 0
chr15:100977551|100977749 hsa-miR-330-5p 1 1 0
chr15:100977551|100977749 hsa-miR-6783-3p 1 0 0
chr15:100977551|100977749 hsa-miR-103a-1-5p 0 1 0
chr15:100977551|100977749 hsa-miR-1271-5p 0 1 0
chr15:100977551|100977749 hsa-miR-4482-5p 0 1 0
chr15:100977551|100977749 hsa-miR-1912-5p 1 0 0
chr15:100977551|100977749 hsa-miR-514b-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:100977551|100977749
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MPSNSKEPLLTGCQLILSTAPRFPPHQAAMKGHPCLPTRVASEE
Nucleotide Sequence CTGCCCAGCAATAGCAAGGAGCCCCTGCTTACTGGGTGTCAACTGATTCTAAGTACAGCCCCCAGATTTCCACCCCACCAGGCAGCAATGAAGGGGCATCCCTGTTTACCCACCAGAGTGGCGTCAGAGGAG
CircID chr15:100977551|100977749
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MVGKQGCPFIAAWWGGNLGAVLRIS
Nucleotide Sequence CTGGTGGGTAAACAGGGATGCCCCTTCATTGCTGCCTGGTGGGGTGGAAATCTGGGGGCTGTACTTAGAATCAGTTGA
CircID chr15:100977551|100977749
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MTPLWWVNRDAPSLLPGGVEIWGLYLESVDTQ
Nucleotide Sequence CTGACGCCACTCTGGTGGGTAAACAGGGATGCCCCTTCATTGCTGCCTGGTGGGGTGGAAATCTGGGGGCTGTACTTAGAATCAGTTGACACCCAGTAA
CircID chr15:100977551|100977749
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MTPSKQGLLAIAGQRWDFRFSSRPASILP
Nucleotide Sequence TTGACACCCAGTAAGCAGGGGCTCCTTGCTATTGCTGGGCAGCGTTGGGACTTCAGGTTCTCCTCTAGGCCTGCTTCAATTCTGCCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab