CircRNA Information

General Information
circRNA Basic Information
CircID chr15:29766266|29766469
Strand -
CircType exon
Host Gene ENSG00000104067.15;
Algorism CIRI2;
Sequence CTTCATTTTTCCGGGATTTCACCAGTGTGACTTTAGTAGGTTTAGCAGGCTGGCTGGAAGCCACTGACCGCCTGTCTGACCGCGGGGACAAGCTCCTCTCTCTACTTGCACTTCTATCCCTCGGCCAAATCTTCTCACTCCTTCTGTTAACCACACCACTCCGGCCACTTCTTGGATCATGTATTTCCTCATCATAACTATCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:29766266|29766469 hsa-miR-224-5p 0 0 1
chr15:29766266|29766469 hsa-miR-224-3p 0 0 1
chr15:29766266|29766469 hsa-miR-130a-5p 0 0 1
chr15:29766266|29766469 hsa-miR-130a-3p 0 0 1
chr15:29766266|29766469 hsa-miR-301a-5p 0 0 1
chr15:29766266|29766469 hsa-miR-301a-3p 0 0 1
chr15:29766266|29766469 hsa-miR-130b-5p 0 0 1
chr15:29766266|29766469 hsa-miR-130b-3p 0 0 1
chr15:29766266|29766469 hsa-miR-596 0 0 1
chr15:29766266|29766469 hsa-miR-605-5p 0 0 1
chr15:29766266|29766469 hsa-miR-605-3p 0 0 1
chr15:29766266|29766469 hsa-miR-640 0 0 1
chr15:29766266|29766469 hsa-miR-454-5p 0 0 1
chr15:29766266|29766469 hsa-miR-454-3p 0 0 1
chr15:29766266|29766469 hsa-miR-708-5p 0 0 1
chr15:29766266|29766469 hsa-miR-708-3p 0 0 1
chr15:29766266|29766469 hsa-miR-301b-5p 0 0 1
chr15:29766266|29766469 hsa-miR-301b-3p 0 0 1
chr15:29766266|29766469 hsa-miR-1253 0 0 1
chr15:29766266|29766469 hsa-miR-1272 0 0 1
chr15:29766266|29766469 hsa-miR-1322 0 0 1
chr15:29766266|29766469 hsa-miR-1324 0 0 1
chr15:29766266|29766469 hsa-miR-28-5p 0 0 1
chr15:29766266|29766469 hsa-miR-519b-3p 0 0 1
chr15:29766266|29766469 hsa-miR-519c-3p 0 0 1
chr15:29766266|29766469 hsa-miR-1300 0 0 1
chr15:29766266|29766469 hsa-miR-519a 0 0 1
chr15:29766266|29766469 hsa-miR-608 1 0 0
chr15:29766266|29766469 hsa-miR-658 1 0 0
chr15:29766266|29766469 hsa-miR-936 1 0 0
chr15:29766266|29766469 hsa-miR-1293 1 0 0
chr15:29766266|29766469 hsa-miR-1538 1 0 0
chr15:29766266|29766469 hsa-miR-2110 1 0 0
chr15:29766266|29766469 hsa-miR-3138 1 0 0
chr15:29766266|29766469 hsa-miR-3197 1 0 0
chr15:29766266|29766469 hsa-miR-4270 1 0 0
chr15:29766266|29766469 hsa-miR-3652 1 0 0
chr15:29766266|29766469 hsa-miR-3911 1 0 0
chr15:29766266|29766469 hsa-miR-4430 1 0 0
chr15:29766266|29766469 hsa-miR-3135b 1 0 0
chr15:29766266|29766469 hsa-miR-4468 1 0 0
chr15:29766266|29766469 hsa-miR-4481 1 0 0
chr15:29766266|29766469 hsa-miR-4510 1 0 0
chr15:29766266|29766469 hsa-miR-4651 1 0 0
chr15:29766266|29766469 hsa-miR-4656 1 0 0
chr15:29766266|29766469 hsa-miR-4669 1 0 0
chr15:29766266|29766469 hsa-miR-4673 1 0 0
chr15:29766266|29766469 hsa-miR-4689 1 0 0
chr15:29766266|29766469 hsa-miR-4739 1 0 0
chr15:29766266|29766469 hsa-miR-4784 1 0 0
chr15:29766266|29766469 hsa-miR-6090 1 0 0
chr15:29766266|29766469 hsa-miR-6127 1 0 0
chr15:29766266|29766469 hsa-miR-6133 1 0 0
chr15:29766266|29766469 hsa-miR-6165 1 0 0
chr15:29766266|29766469 hsa-miR-6863 1 0 0
chr15:29766266|29766469 hsa-miR-7150 1 0 0
chr15:29766266|29766469 hsa-miR-12122 1 0 0
chr15:29766266|29766469 hsa-miR-12128 1 0 0
chr15:29766266|29766469 hsa-miR-138-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4433b-3p 1 0 0
chr15:29766266|29766469 hsa-miR-504-3p 1 0 0
chr15:29766266|29766469 hsa-miR-6747-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4433a-3p 1 0 0
chr15:29766266|29766469 hsa-miR-6825-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6799-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6728-5p 1 0 0
chr15:29766266|29766469 hsa-miR-5187-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6089 1 0 0
chr15:29766266|29766469 hsa-miR-6757-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6873-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6880-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6744-5p 1 0 0
chr15:29766266|29766469 hsa-miR-197-5p 1 0 0
chr15:29766266|29766469 hsa-miR-8069 1 0 0
chr15:29766266|29766469 hsa-miR-7108-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6742-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6798-5p 1 0 0
chr15:29766266|29766469 hsa-miR-1224-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6760-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6782-5p 1 0 0
chr15:29766266|29766469 hsa-miR-3150b-3p 1 0 0
chr15:29766266|29766469 hsa-miR-1226-5p 1 0 0
chr15:29766266|29766469 hsa-miR-1228-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4743-5p 1 0 0
chr15:29766266|29766469 hsa-miR-3648 1 0 0
chr15:29766266|29766469 hsa-miR-149-3p 1 0 0
chr15:29766266|29766469 hsa-miR-3616-3p 1 0 0
chr15:29766266|29766469 hsa-miR-3162-5p 1 0 0
chr15:29766266|29766469 hsa-miR-2276-3p 1 0 0
chr15:29766266|29766469 hsa-miR-6781-5p 1 0 0
chr15:29766266|29766469 hsa-miR-5010-5p 1 0 0
chr15:29766266|29766469 hsa-miR-423-5p 1 0 0
chr15:29766266|29766469 hsa-miR-27a-3p 1 0 0
chr15:29766266|29766469 hsa-miR-4763-3p 1 0 0
chr15:29766266|29766469 hsa-miR-6787-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6812-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6865-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6775-5p 1 0 0
chr15:29766266|29766469 hsa-miR-1343-5p 1 0 0
chr15:29766266|29766469 hsa-miR-5001-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6737-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6752-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6756-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6813-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6815-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6819-5p 1 0 0
chr15:29766266|29766469 hsa-miR-7110-5p 1 0 0
chr15:29766266|29766469 hsa-miR-10401-5p 1 0 0
chr15:29766266|29766469 hsa-miR-1249-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6722-3p 1 0 0
chr15:29766266|29766469 hsa-miR-6797-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4649-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4745-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6729-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6738-5p 1 0 0
chr15:29766266|29766469 hsa-miR-675-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6858-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4758-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6511b-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6856-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6736-5p 1 0 0
chr15:29766266|29766469 hsa-miR-3679-5p 1 0 0
chr15:29766266|29766469 hsa-miR-4646-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6891-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6849-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6791-5p 1 0 0
chr15:29766266|29766469 hsa-miR-6718-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:29766266|29766469
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MTACLTAGTSSSLYLHFYPSAKSSHSFC
Nucleotide Sequence CTGACCGCCTGTCTGACCGCGGGGACAAGCTCCTCTCTCTACTTGCACTTCTATCCCTCGGCCAAATCTTCTCACTCCTTCTGTTAA
CircID chr15:29766266|29766469
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MEATDRLSDRGDKLLSLLALLSLGQIFSLLLLTTPLRPLLGSCISSS
Nucleotide Sequence CTGGAAGCCACTGACCGCCTGTCTGACCGCGGGGACAAGCTCCTCTCTCTACTTGCACTTCTATCCCTCGGCCAAATCTTCTCACTCCTTCTGTTAACCACACCACTCCGGCCACTTCTTGGATCATGTATTTCCTCATCATAA
CircID chr15:29766266|29766469
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence MMRKYMIQEVAGVVWLTEGVRRFGRGIEVQVERGACPRGQTGGQWLPASLLNLLKSHW
Nucleotide Sequence ATGATGAGGAAATACATGATCCAAGAAGTGGCCGGAGTGGTGTGGTTAACAGAAGGAGTGAGAAGATTTGGCCGAGGGATAGAAGTGCAAGTAGAGAGAGGAGCTTGTCCCCGCGGTCAGACAGGCGGTCAGTGGCTTCCAGCCAGCCTGCTAAACCTACTAAAGTCACACTGGTGA
CircID chr15:29766266|29766469
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MSPRSDRRSVASSQPAKPTKVTLVKSRKNE
Nucleotide Sequence TTGTCCCCGCGGTCAGACAGGCGGTCAGTGGCTTCCAGCCAGCCTGCTAAACCTACTAAAGTCACACTGGTGAAATCCCGGAAAAATGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab