CircNet

General Information

circRNA Basic Information

CircID	chr15:34927035\|34942080
Strand	-
CircType	exon
Host Gene	ENSG00000021776.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAGTAGACTTGATACGAAGTCAAGTACAGCAGCTTATCTCCCTCCCAATGTGGATGGGCTTACAGCTGGCACGATTGGAATTAGAATTAAAAAAGACACCTAAGCTAAGAAAATTCTGGAACTTGATTAAAAAGAATGATGAAAAGATGGATCCAGAAGCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTTTCACAACTCATCCAGAAGTTTATCTCTGTGCTGAAATCAGTCCCACTTTCTGCTTTTGGACATGCTTAAATTCTATACTGGTTTTGAAATTAATGACCAAACTGGAAATGCTCTGACAGAGAATGAGATGACCACAATTCACTATGATAGAATTACTTCTCTACAGAGAGCTGCTTTTGCACATTTTCCTGAACTCTATGATTTTGCCCTCTCAAATGTGGCAGAAGTAGATACTCGGGAGTCCTTGGTCAAGTTTTTTGGACCTCTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr15:34927035\|34942080	hsa-miR-27a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:34927035\|34942080
ORF Type	ORF1
Protein Length	72
Nucleotide Length	216
Protein Sequence	MWMGLQLARLELELKKTPKLRKFWNLIKKNDEKMDPEAREQAYQERRFLSQLIQKFISVLKSVPLSAFGHA*
Nucleotide Sequence	ATGTGGATGGGCTTACAGCTGGCACGATTGGAATTAGAATTAAAAAAGACACCTAAGCTAAGAAAATTCTGGAACTTGATTAAAAAGAATGATGAAAAGATGGATCCAGAAGCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTTTCACAACTCATCCAGAAGTTTATCTCTGTGCTGAAATCAGTCCCACTTTCTGCTTTTGGACATGCTTAA

CircID	chr15:34927035\|34942080
ORF Type	ORF2
Protein Length	69
Nucleotide Length	207
Protein Sequence	MLKFYTGFEINDQTGNALTENEMTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRESLVKFFGPL
Nucleotide Sequence	ATGCTTAAATTCTATACTGGTTTTGAAATTAATGACCAAACTGGAAATGCTCTGACAGAGAATGAGATGACCACAATTCACTATGATAGAATTACTTCTCTACAGAGAGCTGCTTTTGCACATTTTCCTGAACTCTATGATTTTGCCCTCTCAAATGTGGCAGAAGTAGATACTCGGGAGTCCTTGGTCAAGTTTTTTGGACCTCTT

CircID	chr15:34927035\|34942080
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MMKRWIQKQENRHIKRGDFFHNSSRSLSLC*
Nucleotide Sequence	ATGATGAAAAGATGGATCCAGAAGCAAGAGAACAGGCATATCAAGAGAGGAGATTTCTTTCACAACTCATCCAGAAGTTTATCTCTGTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr15:34927035\|34942080	NOP56	0	1	0
chr15:34927035\|34942080	ELAVL1	4	7	0
chr15:34927035\|34942080	PRPF8	0	0	1
chr15:34927035\|34942080	TAF15	1	1	0
chr15:34927035\|34942080	FMR1	0	0	1
chr15:34927035\|34942080	CPSF6	1	0	0
chr15:34927035\|34942080	DGCR8	1	0	2
chr15:34927035\|34942080	SRSF1	0	0	1
chr15:34927035\|34942080	NOP58	1	0	4
chr15:34927035\|34942080	U2AF1	1	0	1
chr15:34927035\|34942080	U2AF2	15	6	5
chr15:34927035\|34942080	HNRNPU	1	0	0
chr15:34927035\|34942080	DDX54	0	0	9
chr15:34927035\|34942080	RBM10	2	0	0
chr15:34927035\|34942080	PTBP1	0	0	2
chr15:34927035\|34942080	TRA2A	0	0	1
chr15:34927035\|34942080	HNRNPA1	2	0	0
chr15:34927035\|34942080	ACIN1	0	0	2
chr15:34927035\|34942080	FXR1	0	0	3
chr15:34927035\|34942080	IGF2BP1	1	0	1
chr15:34927035\|34942080	IGF2BP3	0	0	1
chr15:34927035\|34942080	IGF2BP2	1	0	9
chr15:34927035\|34942080	TARDBP	0	1	1
chr15:34927035\|34942080	BUD13	0	0	3
chr15:34927035\|34942080	RBFOX2	0	3	0
chr15:34927035\|34942080	CSTF2T	0	0	2
chr15:34927035\|34942080	RBM22	0	2	0
chr15:34927035\|34942080	FBL	0	0	4
chr15:34927035\|34942080	EIF4A3	3	4	10
chr15:34927035\|34942080	AGO2	0	1	3

CircRNA Information