CircRNA Information

General Information
circRNA Basic Information
CircID chr15:39588625|39589009
Strand -
CircType exon
Host Gene ENSG00000137801.10;
Algorism CIRI2;
Sequence CCCAGTTTGGAGGCAAGGACTGCGTTGGTGATGTAACAGAAAACCAGATCTGCAACAAGCAGGACTGTCCAATTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTTACTGAATGCTGCAGTCAGCATTCGAGGAGATTCCAGCTTGGTTAGTCCTGAGCGATTTGATTGCTCTAAGATGCAGGTGGACAACATAATCCCAACAAGTTATCGGTTCCCTATACCCTATAATATCTTACACTGTGTTAAGTGCCCAGCATGGCAGTATGGCAGCTTAGACCAACCATTTACTGTGACTGTCTCTCTCTCCTTGTCTCAGATGGATGCCTGTCCAATCCCTGCTTTGCCGGCGTGAAGTGTACTAGCTACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:39588625|39589009 hsa-miR-22-5p 0 0 1
chr15:39588625|39589009 hsa-miR-22-3p 0 0 1
chr15:39588625|39589009 hsa-miR-27a-5p 0 0 1
chr15:39588625|39589009 hsa-miR-27a-3p 0 0 1
chr15:39588625|39589009 hsa-miR-107 0 0 1
chr15:39588625|39589009 hsa-miR-27b-5p 0 0 1
chr15:39588625|39589009 hsa-miR-27b-3p 0 0 1
chr15:39588625|39589009 hsa-miR-185-5p 0 0 1
chr15:39588625|39589009 hsa-miR-185-3p 0 0 1
chr15:39588625|39589009 hsa-miR-370-5p 0 0 1
chr15:39588625|39589009 hsa-miR-370-3p 0 0 1
chr15:39588625|39589009 hsa-miR-522-5p 0 0 1
chr15:39588625|39589009 hsa-miR-522-3p 0 0 1
chr15:39588625|39589009 hsa-miR-601 0 0 1
chr15:39588625|39589009 hsa-miR-604 0 1 1
chr15:39588625|39589009 hsa-miR-612 0 0 1
chr15:39588625|39589009 hsa-miR-656-5p 0 0 1
chr15:39588625|39589009 hsa-miR-656-3p 0 0 1
chr15:39588625|39589009 hsa-miR-1179 0 0 1
chr15:39588625|39589009 hsa-miR-1276 0 0 1
chr15:39588625|39589009 hsa-miR-1184 0 0 1
chr15:39588625|39589009 hsa-miR-330-3p 0 0 1
chr15:39588625|39589009 hsa-miR-502-5p 0 1 1
chr15:39588625|39589009 hsa-miR-628-5p 0 1 1
chr15:39588625|39589009 hsa-miR-769-3p 0 0 1
chr15:39588625|39589009 hsa-miR-509-3-5p 0 0 1
chr15:39588625|39589009 hsa-miR-509-5p 0 0 1
chr15:39588625|39589009 hsa-miR-450b-3p 0 0 1
chr15:39588625|39589009 hsa-miR-128 0 0 1
chr15:39588625|39589009 hsa-miR-886-5p 0 0 1
chr15:39588625|39589009 hsa-miR-103 0 0 1
chr15:39588625|39589009 hsa-miR-1285 0 0 1
chr15:39588625|39589009 hsa-miR-24 0 0 1
chr15:39588625|39589009 hsa-miR-499-3p 0 0 1
chr15:39588625|39589009 hsa-miR-661 1 0 0
chr15:39588625|39589009 hsa-miR-3147 1 1 0
chr15:39588625|39589009 hsa-miR-3175 1 1 0
chr15:39588625|39589009 hsa-miR-4298 1 1 0
chr15:39588625|39589009 hsa-miR-4306 1 1 0
chr15:39588625|39589009 hsa-miR-4418 0 1 0
chr15:39588625|39589009 hsa-miR-4425 0 1 0
chr15:39588625|39589009 hsa-miR-4428 0 1 0
chr15:39588625|39589009 hsa-miR-4440 1 0 0
chr15:39588625|39589009 hsa-miR-4449 1 0 0
chr15:39588625|39589009 hsa-miR-4506 1 0 0
chr15:39588625|39589009 hsa-miR-4507 1 0 0
chr15:39588625|39589009 hsa-miR-1587 0 1 0
chr15:39588625|39589009 hsa-miR-4540 0 1 0
chr15:39588625|39589009 hsa-miR-3960 1 0 0
chr15:39588625|39589009 hsa-miR-4644 1 1 0
chr15:39588625|39589009 hsa-miR-4647 1 0 0
chr15:39588625|39589009 hsa-miR-4656 1 0 0
chr15:39588625|39589009 hsa-miR-4675 1 0 0
chr15:39588625|39589009 hsa-miR-4759 0 1 0
chr15:39588625|39589009 hsa-miR-5192 1 0 0
chr15:39588625|39589009 hsa-miR-6090 1 0 0
chr15:39588625|39589009 hsa-miR-8085 1 0 0
chr15:39588625|39589009 hsa-miR-135a-3p 1 0 0
chr15:39588625|39589009 hsa-miR-4731-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6809-5p 0 1 0
chr15:39588625|39589009 hsa-miR-6861-5p 1 0 0
chr15:39588625|39589009 hsa-miR-20a-3p 0 1 0
chr15:39588625|39589009 hsa-miR-6510-5p 1 1 0
chr15:39588625|39589009 hsa-miR-197-5p 1 0 0
chr15:39588625|39589009 hsa-miR-8069 1 0 0
chr15:39588625|39589009 hsa-miR-5589-5p 1 0 0
chr15:39588625|39589009 hsa-miR-7845-5p 1 0 0
chr15:39588625|39589009 hsa-miR-1915-5p 0 1 0
chr15:39588625|39589009 hsa-miR-3663-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6772-5p 1 0 0
chr15:39588625|39589009 hsa-miR-3126-5p 1 0 0
chr15:39588625|39589009 hsa-miR-3934-3p 0 1 0
chr15:39588625|39589009 hsa-miR-1343-3p 0 1 0
chr15:39588625|39589009 hsa-miR-939-3p 1 1 0
chr15:39588625|39589009 hsa-miR-3677-3p 1 0 0
chr15:39588625|39589009 hsa-miR-6501-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6742-3p 0 1 0
chr15:39588625|39589009 hsa-miR-6500-3p 1 1 0
chr15:39588625|39589009 hsa-miR-4708-3p 1 0 0
chr15:39588625|39589009 hsa-miR-1225-5p 1 0 0
chr15:39588625|39589009 hsa-miR-1910-5p 0 1 0
chr15:39588625|39589009 hsa-miR-6513-5p 0 1 0
chr15:39588625|39589009 hsa-miR-4524a-3p 1 0 0
chr15:39588625|39589009 hsa-miR-3664-3p 0 1 0
chr15:39588625|39589009 hsa-miR-6838-3p 1 1 0
chr15:39588625|39589009 hsa-miR-1207-5p 1 0 0
chr15:39588625|39589009 hsa-miR-4763-3p 1 0 0
chr15:39588625|39589009 hsa-miR-1249-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6722-3p 1 1 0
chr15:39588625|39589009 hsa-miR-6797-5p 1 0 0
chr15:39588625|39589009 hsa-miR-3620-5p 1 0 0
chr15:39588625|39589009 hsa-miR-5189-5p 1 0 0
chr15:39588625|39589009 hsa-miR-449c-5p 1 0 0
chr15:39588625|39589009 hsa-miR-3187-5p 1 0 0
chr15:39588625|39589009 hsa-miR-3940-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6731-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6856-5p 1 0 0
chr15:39588625|39589009 hsa-miR-1285-3p 0 1 0
chr15:39588625|39589009 hsa-miR-3173-3p 0 1 0
chr15:39588625|39589009 hsa-miR-6891-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6822-5p 1 0 0
chr15:39588625|39589009 hsa-miR-6783-3p 0 1 0
chr15:39588625|39589009 hsa-miR-642a-3p 1 0 0
chr15:39588625|39589009 hsa-miR-7157-5p 0 1 0
chr15:39588625|39589009 hsa-miR-499a-3p 0 1 0
chr15:39588625|39589009 hsa-miR-499b-3p 0 1 0
chr15:39588625|39589009 hsa-miR-363-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr15:39588625|39589009
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MVSHAAQDETTQELCSFTECCSQHSRRFQLG
Nucleotide Sequence TTGGTGAGCCACGCAGCCCAGGATGAAACGACCCAGGAGCTTTGCTCTTTTACTGAATGCTGCAGTCAGCATTCGAGGAGATTCCAGCTTGGTTAG

CircID chr15:39588625|39589009
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MAVWQLRPTIYCDCLSLLVSDGCLSNPCFAGVKCTSY
Nucleotide Sequence ATGGCAGTATGGCAGCTTAGACCAACCATTTACTGTGACTGTCTCTCTCTCCTTGTCTCAGATGGATGCCTGTCCAATCCCTGCTTTGCCGGCGTGAAGTGTACTAGCTAC

CircID chr15:39588625|39589009
ORF Type ORF3
Protein Length 91
Nucleotide Length 276
Protein Sequence MKRPRSFALLLNAAVSIRGDSSLVSPERFDCSKMQVDNIIPTSYRFPIPYNILHCVKCPAWQYGSLDQPFTVTVSLSLSQMDACPIPALPA
Nucleotide Sequence ATGAAACGACCCAGGAGCTTTGCTCTTTTACTGAATGCTGCAGTCAGCATTCGAGGAGATTCCAGCTTGGTTAGTCCTGAGCGATTTGATTGCTCTAAGATGCAGGTGGACAACATAATCCCAACAAGTTATCGGTTCCCTATACCCTATAATATCTTACACTGTGTTAAGTGCCCAGCATGGCAGTATGGCAGCTTAGACCAACCATTTACTGTGACTGTCTCTCTCTCCTTGTCTCAGATGGATGCCTGTCCAATCCCTGCTTTGCCGGCGTGA

CircID chr15:39588625|39589009
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MLQSAFEEIPAWLVLSDLIALRCRWTT
Nucleotide Sequence ATGCTGCAGTCAGCATTCGAGGAGATTCCAGCTTGGTTAGTCCTGAGCGATTTGATTGCTCTAAGATGCAGGTGGACAACATAA

CircID chr15:39588625|39589009
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MHLRAIKSLRTNQAGISSNADCSIQ
Nucleotide Sequence CTGCATCTTAGAGCAATCAAATCGCTCAGGACTAACCAAGCTGGAATCTCCTCGAATGCTGACTGCAGCATTCAGTAA

CircID chr15:39588625|39589009
ORF Type ORF6
Protein Length 29
Nucleotide Length 87
Protein Sequence MRGSPIGQSCLLQIWFSVTSPTQSLPPNW
Nucleotide Sequence CTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTGG

CircID chr15:39588625|39589009
ORF Type ORF7
Protein Length 70
Nucleotide Length 210
Protein Sequence MLSTCILEQSNRSGLTKLESPRMLTAAFSKRAKLLGRFILGCVAHQLDSPACCRSGFLLHHQRSPCLQTG
Nucleotide Sequence ATGTTGTCCACCTGCATCTTAGAGCAATCAAATCGCTCAGGACTAACCAAGCTGGAATCTCCTCGAATGCTGACTGCAGCATTCAGTAAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTGGG

CircID chr15:39588625|39589009
ORF Type ORF8
Protein Length 45
Nucleotide Length 135
Protein Sequence MQHSVKEQSSWVVSSWAAWLTNWTVLLVADLVFCYITNAVLASKL
Nucleotide Sequence CTGCAGCATTCAGTAAAAGAGCAAAGCTCCTGGGTCGTTTCATCCTGGGCTGCGTGGCTCACCAATTGGACAGTCCTGCTTGTTGCAGATCTGGTTTTCTGTTACATCACCAACGCAGTCCTTGCCTCCAAACTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites