CircRNA Information

General Information
circRNA Basic Information
CircID chr15:40288178|40288324
Strand +
CircType exon
Host Gene ENSG00000137841.10;
Algorism CIRI2;
Sequence CTCCACTCTAGCCCCGAACCCTCCTGCCCCAGGCTTCCAGGCCCCATCAGGCCTGCCCTGAGTTGGCCTTGTCCACTCCTTGAGGCAGATCCTGGCACTACCTCACAGCTCCCTGGGGACGGCCACTCCCTGGCTGAGGGCCCTCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:40288178|40288324 hsa-let-7b-5p 0 0 1
chr15:40288178|40288324 hsa-let-7b-3p 0 0 1
chr15:40288178|40288324 hsa-let-7c-5p 0 0 1
chr15:40288178|40288324 hsa-let-7c-3p 0 0 1
chr15:40288178|40288324 hsa-let-7d-5p 0 0 1
chr15:40288178|40288324 hsa-let-7d-3p 0 0 1
chr15:40288178|40288324 hsa-let-7e-5p 0 0 1
chr15:40288178|40288324 hsa-let-7e-3p 0 0 1
chr15:40288178|40288324 hsa-miR-98-5p 0 0 1
chr15:40288178|40288324 hsa-miR-98-3p 0 0 1
chr15:40288178|40288324 hsa-let-7g-5p 0 0 1
chr15:40288178|40288324 hsa-let-7g-3p 0 0 1
chr15:40288178|40288324 hsa-let-7i-5p 0 0 1
chr15:40288178|40288324 hsa-let-7i-3p 0 0 1
chr15:40288178|40288324 hsa-miR-196b-5p 0 0 1
chr15:40288178|40288324 hsa-miR-196b-3p 0 0 1
chr15:40288178|40288324 hsa-miR-202-5p 0 0 1
chr15:40288178|40288324 hsa-miR-202-3p 0 0 1
chr15:40288178|40288324 hsa-miR-519e-5p 0 0 1
chr15:40288178|40288324 hsa-miR-519e-3p 0 0 1
chr15:40288178|40288324 hsa-miR-510-5p 0 0 1
chr15:40288178|40288324 hsa-miR-510-3p 0 0 1
chr15:40288178|40288324 hsa-miR-661 0 0 1
chr15:40288178|40288324 hsa-miR-920 1 1 1
chr15:40288178|40288324 hsa-miR-1294 0 0 1
chr15:40288178|40288324 hsa-miR-1266-5p 0 0 1
chr15:40288178|40288324 hsa-miR-1266-3p 0 0 1
chr15:40288178|40288324 hsa-miR-671-5p 1 1 1
chr15:40288178|40288324 hsa-miR-486-3p 0 0 1
chr15:40288178|40288324 hsa-miR-515-3p 0 0 1
chr15:40288178|40288324 hsa-let-7a 0 0 1
chr15:40288178|40288324 hsa-let-7f 0 0 1
chr15:40288178|40288324 hsa-miR-1254 0 0 1
chr15:40288178|40288324 hsa-miR-196a 0 0 1
chr15:40288178|40288324 hsa-miR-1201 0 0 1
chr15:40288178|40288324 hsa-miR-371-3p 0 0 1
chr15:40288178|40288324 hsa-miR-608 1 1 0
chr15:40288178|40288324 hsa-miR-637 1 0 0
chr15:40288178|40288324 hsa-miR-762 1 0 0
chr15:40288178|40288324 hsa-miR-921 1 0 0
chr15:40288178|40288324 hsa-miR-2861 1 1 0
chr15:40288178|40288324 hsa-miR-3141 1 0 0
chr15:40288178|40288324 hsa-miR-3196 1 0 0
chr15:40288178|40288324 hsa-miR-4298 1 0 0
chr15:40288178|40288324 hsa-miR-4260 0 1 0
chr15:40288178|40288324 hsa-miR-4270 1 1 0
chr15:40288178|40288324 hsa-miR-1268b 1 0 0
chr15:40288178|40288324 hsa-miR-4449 1 0 0
chr15:40288178|40288324 hsa-miR-4489 0 1 0
chr15:40288178|40288324 hsa-miR-4651 1 1 0
chr15:40288178|40288324 hsa-miR-4656 1 0 0
chr15:40288178|40288324 hsa-miR-4688 1 0 0
chr15:40288178|40288324 hsa-miR-4721 1 0 0
chr15:40288178|40288324 hsa-miR-4736 1 0 0
chr15:40288178|40288324 hsa-miR-4739 1 0 0
chr15:40288178|40288324 hsa-miR-5090 1 1 0
chr15:40288178|40288324 hsa-miR-5194 1 0 0
chr15:40288178|40288324 hsa-miR-5787 1 0 0
chr15:40288178|40288324 hsa-miR-6079 0 1 0
chr15:40288178|40288324 hsa-miR-6081 1 0 0
chr15:40288178|40288324 hsa-miR-6090 1 0 0
chr15:40288178|40288324 hsa-miR-6165 1 0 0
chr15:40288178|40288324 hsa-miR-8089 1 0 0
chr15:40288178|40288324 hsa-miR-9986 0 1 0
chr15:40288178|40288324 hsa-miR-4433b-3p 1 0 0
chr15:40288178|40288324 hsa-miR-3157-5p 0 1 0
chr15:40288178|40288324 hsa-miR-6747-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4433a-3p 1 0 0
chr15:40288178|40288324 hsa-miR-6765-5p 1 0 0
chr15:40288178|40288324 hsa-miR-7106-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6825-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6799-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6510-5p 1 0 0
chr15:40288178|40288324 hsa-miR-1227-5p 0 1 0
chr15:40288178|40288324 hsa-miR-6515-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6089 1 0 0
chr15:40288178|40288324 hsa-miR-4695-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4722-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6890-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6727-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6721-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6742-5p 1 0 0
chr15:40288178|40288324 hsa-miR-3180-3p 1 0 0
chr15:40288178|40288324 hsa-miR-6793-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6805-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6827-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6798-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6760-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6782-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6874-5p 1 0 0
chr15:40288178|40288324 hsa-miR-5006-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6786-5p 1 0 0
chr15:40288178|40288324 hsa-miR-1226-5p 1 0 0
chr15:40288178|40288324 hsa-miR-1229-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4640-5p 1 0 0
chr15:40288178|40288324 hsa-miR-885-3p 1 0 0
chr15:40288178|40288324 hsa-miR-3127-5p 0 1 0
chr15:40288178|40288324 hsa-miR-296-3p 1 0 0
chr15:40288178|40288324 hsa-miR-6771-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6749-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6501-5p 1 0 0
chr15:40288178|40288324 hsa-miR-149-3p 1 1 0
chr15:40288178|40288324 hsa-miR-6781-5p 1 0 0
chr15:40288178|40288324 hsa-miR-7113-5p 0 1 0
chr15:40288178|40288324 hsa-miR-1207-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4763-3p 1 1 0
chr15:40288178|40288324 hsa-miR-6775-5p 1 1 0
chr15:40288178|40288324 hsa-miR-1343-5p 1 0 0
chr15:40288178|40288324 hsa-miR-5001-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6726-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6737-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6743-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6752-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6754-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6756-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6813-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6819-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6851-5p 1 0 0
chr15:40288178|40288324 hsa-miR-7107-5p 1 0 0
chr15:40288178|40288324 hsa-miR-1249-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6722-3p 1 0 0
chr15:40288178|40288324 hsa-miR-6774-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6797-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6879-5p 1 1 0
chr15:40288178|40288324 hsa-miR-7111-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4728-5p 1 0 0
chr15:40288178|40288324 hsa-miR-10396b-5p 1 0 0
chr15:40288178|40288324 hsa-miR-1909-3p 1 0 0
chr15:40288178|40288324 hsa-miR-328-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4632-5p 0 1 0
chr15:40288178|40288324 hsa-miR-4685-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6777-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6846-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6848-5p 1 1 0
chr15:40288178|40288324 hsa-miR-6883-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6889-5p 1 0 0
chr15:40288178|40288324 hsa-miR-4436b-3p 1 1 0
chr15:40288178|40288324 hsa-miR-939-5p 1 0 0
chr15:40288178|40288324 hsa-miR-3199 1 0 0
chr15:40288178|40288324 hsa-miR-4633-3p 1 0 0
chr15:40288178|40288324 hsa-miR-3085-5p 1 0 0
chr15:40288178|40288324 hsa-miR-3198 1 0 0
chr15:40288178|40288324 hsa-miR-7843-5p 0 1 0
chr15:40288178|40288324 hsa-miR-10398-3p 1 0 0
chr15:40288178|40288324 hsa-miR-6891-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6785-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6724-5p 0 1 0
chr15:40288178|40288324 hsa-miR-6791-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6762-5p 1 0 0
chr15:40288178|40288324 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:40288178|40288324
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSWPCPLLEADPGTTSQLPGDGHSLAEGPP
Nucleotide Sequence CTGAGTTGGCCTTGTCCACTCCTTGAGGCAGATCCTGGCACTACCTCACAGCTCCCTGGGGACGGCCACTCCCTGGCTGAGGGCCCTCCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab