CircRNA Information

General Information
circRNA Basic Information
CircID chr15:40291791|40291950
Strand +
CircType exon
Host Gene ENSG00000137841.10;
Algorism CIRI2;
Sequence CTTCCTGACCTGCTCTCCCTACACAGAAGCCCTTCCCACTGGCGAGTCCAGTTGCCAGCCAGGTCAATGGGGCGTTGGCCCCAACGAGCAATGGGTCACCAGGTATGAGCTTCGGTCCGCACACCTACTGGGGGCACCTCCACCTCTGCACCCACAGGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:40291791|40291950 hsa-miR-192-5p 0 0 1
chr15:40291791|40291950 hsa-miR-192-3p 0 0 1
chr15:40291791|40291950 hsa-miR-215-5p 0 0 1
chr15:40291791|40291950 hsa-miR-215-3p 0 0 1
chr15:40291791|40291950 hsa-miR-422a 0 1 1
chr15:40291791|40291950 hsa-miR-619-5p 0 0 1
chr15:40291791|40291950 hsa-miR-619-3p 0 0 1
chr15:40291791|40291950 hsa-miR-631 0 0 1
chr15:40291791|40291950 hsa-miR-660-5p 0 0 1
chr15:40291791|40291950 hsa-miR-660-3p 0 0 1
chr15:40291791|40291950 hsa-miR-147b-5p 0 0 1
chr15:40291791|40291950 hsa-miR-147b-3p 0 0 1
chr15:40291791|40291950 hsa-miR-873-5p 0 0 1
chr15:40291791|40291950 hsa-miR-873-3p 0 0 1
chr15:40291791|40291950 hsa-miR-1306-5p 0 0 1
chr15:40291791|40291950 hsa-miR-1306-3p 0 0 1
chr15:40291791|40291950 hsa-miR-1321 0 0 1
chr15:40291791|40291950 hsa-miR-361-3p 0 1 1
chr15:40291791|40291950 hsa-miR-378 0 0 1
chr15:40291791|40291950 hsa-miR-638 1 0 0
chr15:40291791|40291950 hsa-miR-658 1 0 0
chr15:40291791|40291950 hsa-miR-663b 1 0 0
chr15:40291791|40291950 hsa-miR-378c 0 1 0
chr15:40291791|40291950 hsa-miR-4257 0 1 0
chr15:40291791|40291950 hsa-miR-3943 1 0 0
chr15:40291791|40291950 hsa-miR-378i 0 1 0
chr15:40291791|40291950 hsa-miR-4651 1 0 0
chr15:40291791|40291950 hsa-miR-4754 1 1 0
chr15:40291791|40291950 hsa-miR-6085 1 0 0
chr15:40291791|40291950 hsa-miR-8085 0 1 0
chr15:40291791|40291950 hsa-miR-12114 0 1 0
chr15:40291791|40291950 hsa-miR-6861-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6799-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6741-5p 1 1 0
chr15:40291791|40291950 hsa-miR-6842-3p 0 1 0
chr15:40291791|40291950 hsa-miR-6759-5p 0 1 0
chr15:40291791|40291950 hsa-miR-6721-5p 1 0 0
chr15:40291791|40291950 hsa-miR-3189-5p 0 1 0
chr15:40291791|40291950 hsa-miR-6776-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6748-5p 0 1 0
chr15:40291791|40291950 hsa-miR-6772-5p 0 1 0
chr15:40291791|40291950 hsa-miR-6798-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6760-5p 0 1 0
chr15:40291791|40291950 hsa-miR-2467-3p 0 1 0
chr15:40291791|40291950 hsa-miR-6782-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6765-3p 1 0 0
chr15:40291791|40291950 hsa-miR-1229-5p 1 0 0
chr15:40291791|40291950 hsa-miR-3162-5p 0 1 0
chr15:40291791|40291950 hsa-miR-194-3p 0 1 0
chr15:40291791|40291950 hsa-miR-3158-3p 0 1 0
chr15:40291791|40291950 hsa-miR-2277-5p 1 0 0
chr15:40291791|40291950 hsa-miR-4763-3p 1 0 0
chr15:40291791|40291950 hsa-miR-6769b-5p 1 1 0
chr15:40291791|40291950 hsa-miR-6778-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6816-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6756-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6819-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6851-5p 0 1 0
chr15:40291791|40291950 hsa-miR-6763-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6779-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6797-5p 1 0 0
chr15:40291791|40291950 hsa-miR-3620-5p 1 0 0
chr15:40291791|40291950 hsa-miR-4728-5p 1 1 0
chr15:40291791|40291950 hsa-miR-5196-5p 1 0 0
chr15:40291791|40291950 hsa-miR-6780b-5p 1 0 0
chr15:40291791|40291950 hsa-miR-1909-3p 1 0 0
chr15:40291791|40291950 hsa-miR-4725-3p 1 0 0
chr15:40291791|40291950 hsa-miR-675-5p 1 1 0
chr15:40291791|40291950 hsa-miR-6883-5p 0 1 0
chr15:40291791|40291950 hsa-miR-10394-3p 1 0 0
chr15:40291791|40291950 hsa-miR-6731-5p 0 1 0
chr15:40291791|40291950 hsa-miR-4646-5p 1 0 0
chr15:40291791|40291950 hsa-miR-378a-3p 0 1 0
chr15:40291791|40291950 hsa-miR-6724-5p 1 0 0
chr15:40291791|40291950 hsa-miR-99b-3p 0 1 0
chr15:40291791|40291950 hsa-miR-378d 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:40291791|40291950
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MLSLHRSPSHWRVQLPARSMGRWPQRAMGHQV
Nucleotide Sequence CTGCTCTCCCTACACAGAAGCCCTTCCCACTGGCGAGTCCAGTTGCCAGCCAGGTCAATGGGGCGTTGGCCCCAACGAGCAATGGGTCACCAGGTATGA
CircID chr15:40291791|40291950
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence MTCSPYTEALPTGESSCQPGQWGVGPNEQWVTRYELRSAHLLGAPPPLHPQA
Nucleotide Sequence CTGACCTGCTCTCCCTACACAGAAGCCCTTCCCACTGGCGAGTCCAGTTGCCAGCCAGGTCAATGGGGCGTTGGCCCCAACGAGCAATGGGTCACCAGGTATGAGCTTCGGTCCGCACACCTACTGGGGGCACCTCCACCTCTGCACCCACAGGCA
CircID chr15:40291791|40291950
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MASPVASQVNGALAPTSNGSPGMSFGPHTYWGHLHLCTHR
Nucleotide Sequence CTGGCGAGTCCAGTTGCCAGCCAGGTCAATGGGGCGTTGGCCCCAACGAGCAATGGGTCACCAGGTATGAGCTTCGGTCCGCACACCTACTGGGGGCACCTCCACCTCTGCACCCACAGG
CircID chr15:40291791|40291950
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MLVGANAPLTWLATGLASGKGFCVGRAGQE
Nucleotide Sequence TTGCTCGTTGGGGCCAACGCCCCATTGACCTGGCTGGCAACTGGACTCGCCAGTGGGAAGGGCTTCTGTGTAGGGAGAGCAGGTCAGGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab