CircRNA Information

General Information
circRNA Basic Information
CircID chr15:40767410|40767568
Strand -
CircType exon
Host Gene ENSG00000137880.5;
Algorism CIRI2;
Sequence CTCCAAGCTCCTGCCTCACCGTCTGCCTTGCTCCTCTCTTCCCAAATCATCACCGCCATGGGCCCAGCCCCAAAGGGCAGTGAATGGCCTTCTCTGAAACCCTGCGTCAAGCAGTGGGAGAGGGCAGTGCCCGGTGCCCTGGTGCTCCCAGCTGCCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:40767410|40767568 hsa-miR-29a-5p 0 0 1
chr15:40767410|40767568 hsa-miR-29a-3p 0 0 1
chr15:40767410|40767568 hsa-miR-150-5p 0 0 1
chr15:40767410|40767568 hsa-miR-150-3p 0 0 1
chr15:40767410|40767568 hsa-miR-29c-5p 0 0 1
chr15:40767410|40767568 hsa-miR-29c-3p 0 0 1
chr15:40767410|40767568 hsa-miR-432-5p 0 0 1
chr15:40767410|40767568 hsa-miR-432-3p 0 0 1
chr15:40767410|40767568 hsa-miR-708-5p 0 0 1
chr15:40767410|40767568 hsa-miR-708-3p 0 0 1
chr15:40767410|40767568 hsa-miR-920 0 0 1
chr15:40767410|40767568 hsa-miR-938 0 0 1
chr15:40767410|40767568 hsa-miR-940 0 0 1
chr15:40767410|40767568 hsa-miR-1827 0 1 1
chr15:40767410|40767568 hsa-miR-296-5p 0 0 1
chr15:40767410|40767568 hsa-miR-532-3p 0 0 1
chr15:40767410|40767568 hsa-miR-28-5p 0 0 1
chr15:40767410|40767568 hsa-miR-1207-3p 0 0 1
chr15:40767410|40767568 hsa-miR-29b 0 0 1
chr15:40767410|40767568 hsa-miR-608 1 0 0
chr15:40767410|40767568 hsa-miR-637 1 1 0
chr15:40767410|40767568 hsa-miR-638 1 0 0
chr15:40767410|40767568 hsa-miR-650 1 0 0
chr15:40767410|40767568 hsa-miR-658 1 0 0
chr15:40767410|40767568 hsa-miR-762 1 1 0
chr15:40767410|40767568 hsa-miR-765 1 0 0
chr15:40767410|40767568 hsa-miR-3122 1 0 0
chr15:40767410|40767568 hsa-miR-3132 1 0 0
chr15:40767410|40767568 hsa-miR-3175 1 0 0
chr15:40767410|40767568 hsa-miR-3185 1 0 0
chr15:40767410|40767568 hsa-miR-3197 1 0 0
chr15:40767410|40767568 hsa-miR-4306 1 0 0
chr15:40767410|40767568 hsa-miR-4260 0 1 0
chr15:40767410|40767568 hsa-miR-4271 1 0 0
chr15:40767410|40767568 hsa-miR-3937 1 0 0
chr15:40767410|40767568 hsa-miR-4476 1 0 0
chr15:40767410|40767568 hsa-miR-4489 1 0 0
chr15:40767410|40767568 hsa-miR-4492 0 1 0
chr15:40767410|40767568 hsa-miR-4493 0 1 0
chr15:40767410|40767568 hsa-miR-4505 1 0 0
chr15:40767410|40767568 hsa-miR-4507 1 0 0
chr15:40767410|40767568 hsa-miR-4508 1 0 0
chr15:40767410|40767568 hsa-miR-4533 1 0 0
chr15:40767410|40767568 hsa-miR-1587 1 0 0
chr15:40767410|40767568 hsa-miR-4644 1 1 0
chr15:40767410|40767568 hsa-miR-4688 1 0 0
chr15:40767410|40767568 hsa-miR-4689 1 0 0
chr15:40767410|40767568 hsa-miR-4706 1 0 0
chr15:40767410|40767568 hsa-miR-4710 0 1 0
chr15:40767410|40767568 hsa-miR-4739 1 1 0
chr15:40767410|40767568 hsa-miR-4741 1 0 0
chr15:40767410|40767568 hsa-miR-4748 1 0 0
chr15:40767410|40767568 hsa-miR-5192 1 0 0
chr15:40767410|40767568 hsa-miR-5572 1 0 0
chr15:40767410|40767568 hsa-miR-5739 1 0 0
chr15:40767410|40767568 hsa-miR-5787 1 0 0
chr15:40767410|40767568 hsa-miR-6077 1 0 0
chr15:40767410|40767568 hsa-miR-6081 1 0 0
chr15:40767410|40767568 hsa-miR-6085 1 0 0
chr15:40767410|40767568 hsa-miR-6090 1 0 0
chr15:40767410|40767568 hsa-miR-6132 1 0 0
chr15:40767410|40767568 hsa-miR-6133 1 0 0
chr15:40767410|40767568 hsa-miR-6860 1 0 0
chr15:40767410|40767568 hsa-miR-7515 1 0 0
chr15:40767410|40767568 hsa-miR-8085 1 0 0
chr15:40767410|40767568 hsa-miR-9500 1 0 0
chr15:40767410|40767568 hsa-miR-12115 1 0 0
chr15:40767410|40767568 hsa-miR-12118 1 0 0
chr15:40767410|40767568 hsa-miR-4433b-3p 1 0 0
chr15:40767410|40767568 hsa-miR-18a-3p 0 1 0
chr15:40767410|40767568 hsa-miR-15a-3p 0 1 0
chr15:40767410|40767568 hsa-miR-6734-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6765-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3150a-3p 1 0 0
chr15:40767410|40767568 hsa-miR-7106-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6892-3p 0 1 0
chr15:40767410|40767568 hsa-miR-6799-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6510-5p 1 0 0
chr15:40767410|40767568 hsa-miR-5187-5p 1 0 0
chr15:40767410|40767568 hsa-miR-1227-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3663-3p 0 1 0
chr15:40767410|40767568 hsa-miR-3192-5p 1 1 0
chr15:40767410|40767568 hsa-miR-593-5p 0 1 0
chr15:40767410|40767568 hsa-miR-6820-5p 1 0 0
chr15:40767410|40767568 hsa-miR-197-5p 1 0 0
chr15:40767410|40767568 hsa-miR-8069 1 0 0
chr15:40767410|40767568 hsa-miR-7110-3p 0 1 0
chr15:40767410|40767568 hsa-miR-6716-5p 1 0 0
chr15:40767410|40767568 hsa-miR-1292-5p 1 0 0
chr15:40767410|40767568 hsa-miR-185-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6732-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6827-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6770-5p 0 1 0
chr15:40767410|40767568 hsa-miR-6760-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3150b-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6888-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6810-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4713-5p 0 1 0
chr15:40767410|40767568 hsa-miR-6786-5p 1 1 0
chr15:40767410|40767568 hsa-miR-5088-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6740-5p 1 1 0
chr15:40767410|40767568 hsa-miR-185-5p 1 0 0
chr15:40767410|40767568 hsa-miR-204-3p 1 0 0
chr15:40767410|40767568 hsa-miR-4640-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6753-5p 1 1 0
chr15:40767410|40767568 hsa-miR-1908-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6771-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4690-5p 1 0 0
chr15:40767410|40767568 hsa-miR-92b-5p 1 0 0
chr15:40767410|40767568 hsa-miR-877-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3202 1 0 0
chr15:40767410|40767568 hsa-miR-4733-3p 0 1 0
chr15:40767410|40767568 hsa-miR-6830-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6824-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6864-5p 1 0 0
chr15:40767410|40767568 hsa-miR-423-5p 1 0 0
chr15:40767410|40767568 hsa-let-7e-5p 0 1 0
chr15:40767410|40767568 hsa-miR-6832-5p 1 0 0
chr15:40767410|40767568 hsa-miR-598-5p 1 0 0
chr15:40767410|40767568 hsa-miR-483-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6890-3p 0 1 0
chr15:40767410|40767568 hsa-miR-124-3p 1 0 0
chr15:40767410|40767568 hsa-miR-1207-5p 1 0 0
chr15:40767410|40767568 hsa-miR-1233-5p 1 1 0
chr15:40767410|40767568 hsa-miR-1273h-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4763-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6778-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6812-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6870-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6893-5p 1 0 0
chr15:40767410|40767568 hsa-miR-1343-5p 1 0 0
chr15:40767410|40767568 hsa-miR-5001-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6737-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6743-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6754-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6756-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6803-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6813-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6819-5p 1 0 0
chr15:40767410|40767568 hsa-miR-10401-5p 1 0 0
chr15:40767410|40767568 hsa-miR-11181-3p 1 0 0
chr15:40767410|40767568 hsa-miR-1249-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6722-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6751-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6763-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6779-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6780a-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6788-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6808-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6879-5p 1 1 0
chr15:40767410|40767568 hsa-miR-3620-5p 1 0 0
chr15:40767410|40767568 hsa-miR-5189-5p 1 0 0
chr15:40767410|40767568 hsa-miR-5196-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6780b-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6836-5p 1 0 0
chr15:40767410|40767568 hsa-miR-10396b-5p 1 0 0
chr15:40767410|40767568 hsa-miR-328-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4632-5p 1 1 0
chr15:40767410|40767568 hsa-miR-4725-3p 1 0 0
chr15:40767410|40767568 hsa-miR-4745-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6735-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6794-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6846-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6848-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3187-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6831-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6845-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6885-5p 1 0 0
chr15:40767410|40767568 hsa-miR-939-5p 1 0 0
chr15:40767410|40767568 hsa-miR-10394-3p 1 0 0
chr15:40767410|40767568 hsa-miR-1910-3p 1 0 0
chr15:40767410|40767568 hsa-miR-4633-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6511a-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6731-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6758-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6856-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6773-5p 1 0 0
chr15:40767410|40767568 hsa-miR-324-3p 0 1 0
chr15:40767410|40767568 hsa-miR-3173-3p 1 0 0
chr15:40767410|40767568 hsa-miR-4646-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4747-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6876-5p 1 0 0
chr15:40767410|40767568 hsa-miR-4667-5p 1 0 0
chr15:40767410|40767568 hsa-miR-3184-5p 1 0 0
chr15:40767410|40767568 hsa-miR-6724-5p 1 1 0
chr15:40767410|40767568 hsa-miR-6762-5p 1 0 0
chr15:40767410|40767568 hsa-miR-10400-3p 1 0 0
chr15:40767410|40767568 hsa-miR-6859-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:40767410|40767568
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MLLSSQIITAMGPAPKGSEWPSLKPCVKQWERAVPGALVLPAAL
Nucleotide Sequence TTGCTCCTCTCTTCCCAAATCATCACCGCCATGGGCCCAGCCCCAAAGGGCAGTGAATGGCCTTCTCTGAAACCCTGCGTCAAGCAGTGGGAGAGGGCAGTGCCCGGTGCCCTGGTGCTCCCAGCTGCCCTC
CircID chr15:40767410|40767568
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MPHRLPCSSLPKSSPPWAQPQRAVNGLL
Nucleotide Sequence CTGCCTCACCGTCTGCCTTGCTCCTCTCTTCCCAAATCATCACCGCCATGGGCCCAGCCCCAAAGGGCAGTGAATGGCCTTCTCTGA
CircID chr15:40767410|40767568
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MAFSETLRQAVGEGSARCPGAPSCP
Nucleotide Sequence ATGGCCTTCTCTGAAACCCTGCGTCAAGCAGTGGGAGAGGGCAGTGCCCGGTGCCCTGGTGCTCCCAGCTGCCCT
CircID chr15:40767410|40767568
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MLDAGFQRRPFTALWGWAHGGDDLGREEQGRR
Nucleotide Sequence CTGCTTGACGCAGGGTTTCAGAGAAGGCCATTCACTGCCCTTTGGGGCTGGGCCCATGGCGGTGATGATTTGGGAAGAGAGGAGCAAGGCAGACGGTGA
CircID chr15:40767410|40767568
ORF Type ORF5
Protein Length 36
Nucleotide Length 108
Protein Sequence MTQGFREGHSLPFGAGPMAVMIWEERSKADGEAGAW
Nucleotide Sequence TTGACGCAGGGTTTCAGAGAAGGCCATTCACTGCCCTTTGGGGCTGGGCCCATGGCGGTGATGATTTGGGAAGAGAGGAGCAAGGCAGACGGTGAGGCAGGAGCTTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab