CircRNA Information

General Information
circRNA Basic Information
CircID chr15:40853523|40853762
Strand -
CircType exon
Host Gene ENSG00000166145.13;
Algorism CIRI2;
Sequence TCAAGGAAGGCACCTACCTGTTCCAGCTGACAGTGACTAGCTCAGACCACCCAGAGGACACGGCCAACGTCACAGTCACTGTGCTGTCCACCAAGCAGACAGAAGGTGAGGGAGGGGTGAGGAGCAGCACCTGGAGCCCCCGCTGTGCGGATTGGCCGCACGGTCCCCTCATAAGCTCTCCCCCCTAGACTACTGCCTCGCATCCAACAAGGTGGGTCGCTGCCGGGGCTCTTTCCCACG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:40853523|40853762 hsa-miR-21-5p 0 0 1
chr15:40853523|40853762 hsa-miR-21-3p 0 0 1
chr15:40853523|40853762 hsa-miR-134-5p 0 0 1
chr15:40853523|40853762 hsa-miR-134-3p 0 0 1
chr15:40853523|40853762 hsa-miR-326 0 0 1
chr15:40853523|40853762 hsa-miR-346 0 0 1
chr15:40853523|40853762 hsa-miR-551a 0 0 1
chr15:40853523|40853762 hsa-miR-551b-5p 0 0 1
chr15:40853523|40853762 hsa-miR-551b-3p 0 0 1
chr15:40853523|40853762 hsa-miR-610 0 0 1
chr15:40853523|40853762 hsa-miR-632 0 0 1
chr15:40853523|40853762 hsa-miR-943 0 0 1
chr15:40853523|40853762 hsa-miR-1237-5p 0 0 1
chr15:40853523|40853762 hsa-miR-1237-3p 0 0 1
chr15:40853523|40853762 hsa-miR-1208 0 0 1
chr15:40853523|40853762 hsa-miR-1293 0 0 1
chr15:40853523|40853762 hsa-miR-1276 0 0 1
chr15:40853523|40853762 hsa-miR-1306-5p 0 0 1
chr15:40853523|40853762 hsa-miR-1306-3p 0 0 1
chr15:40853523|40853762 hsa-miR-1827 0 0 1
chr15:40853523|40853762 hsa-miR-1225-3p 0 0 1
chr15:40853523|40853762 hsa-miR-885-3p 0 0 1
chr15:40853523|40853762 hsa-miR-423-5p 0 0 1
chr15:40853523|40853762 hsa-miR-1224-3p 0 0 1
chr15:40853523|40853762 hsa-miR-502-5p 0 0 1
chr15:40853523|40853762 hsa-miR-1207-3p 0 0 1
chr15:40853523|40853762 hsa-miR-199b-3p 0 0 1
chr15:40853523|40853762 hsa-miR-199a-3p 0 0 1
chr15:40853523|40853762 hsa-miR-330-5p 0 0 1
chr15:40853523|40853762 hsa-miR-590-5p 0 0 1
chr15:40853523|40853762 hsa-miR-128 0 0 1
chr15:40853523|40853762 hsa-miR-323-5p 0 0 1
chr15:40853523|40853762 hsa-miR-449a 1 0 0
chr15:40853523|40853762 hsa-miR-608 1 0 0
chr15:40853523|40853762 hsa-miR-637 1 0 0
chr15:40853523|40853762 hsa-miR-638 1 0 0
chr15:40853523|40853762 hsa-miR-663a 1 0 0
chr15:40853523|40853762 hsa-miR-1294 1 0 0
chr15:40853523|40853762 hsa-miR-4259 1 0 0
chr15:40853523|40853762 hsa-miR-3907 1 0 0
chr15:40853523|40853762 hsa-miR-4669 1 0 0
chr15:40853523|40853762 hsa-miR-4688 1 0 0
chr15:40853523|40853762 hsa-miR-4706 1 0 0
chr15:40853523|40853762 hsa-miR-4721 1 0 0
chr15:40853523|40853762 hsa-miR-4739 1 0 0
chr15:40853523|40853762 hsa-miR-4767 1 0 0
chr15:40853523|40853762 hsa-miR-5090 1 0 0
chr15:40853523|40853762 hsa-miR-5787 1 0 0
chr15:40853523|40853762 hsa-miR-6090 1 0 0
chr15:40853523|40853762 hsa-miR-6127 1 0 0
chr15:40853523|40853762 hsa-miR-7974 1 0 0
chr15:40853523|40853762 hsa-miR-8078 1 0 0
chr15:40853523|40853762 hsa-miR-8085 1 0 0
chr15:40853523|40853762 hsa-miR-11400 1 0 0
chr15:40853523|40853762 hsa-miR-12119 1 0 0
chr15:40853523|40853762 hsa-miR-6741-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6727-5p 1 0 0
chr15:40853523|40853762 hsa-miR-197-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6776-5p 1 0 0
chr15:40853523|40853762 hsa-miR-3180-3p 1 0 0
chr15:40853523|40853762 hsa-miR-6796-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6805-5p 1 0 0
chr15:40853523|40853762 hsa-miR-7109-5p 1 0 0
chr15:40853523|40853762 hsa-let-7b-5p 1 0 0
chr15:40853523|40853762 hsa-miR-149-3p 1 0 0
chr15:40853523|40853762 hsa-miR-6789-5p 1 0 0
chr15:40853523|40853762 hsa-let-7g-5p 1 0 0
chr15:40853523|40853762 hsa-miR-1225-5p 1 0 0
chr15:40853523|40853762 hsa-let-7i-5p 1 0 0
chr15:40853523|40853762 hsa-miR-744-5p 1 0 0
chr15:40853523|40853762 hsa-miR-34a-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6734-3p 1 0 0
chr15:40853523|40853762 hsa-miR-1233-5p 1 0 0
chr15:40853523|40853762 hsa-miR-4763-3p 1 0 0
chr15:40853523|40853762 hsa-miR-6769b-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6870-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6893-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6775-5p 1 0 0
chr15:40853523|40853762 hsa-miR-1343-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6743-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6756-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6803-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6819-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6722-3p 1 0 0
chr15:40853523|40853762 hsa-miR-6808-5p 1 0 0
chr15:40853523|40853762 hsa-miR-7111-5p 1 0 0
chr15:40853523|40853762 hsa-miR-4728-5p 1 0 0
chr15:40853523|40853762 hsa-miR-1909-3p 1 0 0
chr15:40853523|40853762 hsa-miR-328-5p 1 0 0
chr15:40853523|40853762 hsa-miR-449c-5p 1 0 0
chr15:40853523|40853762 hsa-miR-4632-5p 1 0 0
chr15:40853523|40853762 hsa-miR-4749-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6729-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6795-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6887-5p 1 0 0
chr15:40853523|40853762 hsa-miR-3187-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6885-5p 1 0 0
chr15:40853523|40853762 hsa-miR-939-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6511a-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6731-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6718-5p 1 0 0
chr15:40853523|40853762 hsa-miR-6775-3p 1 0 0
chr15:40853523|40853762 hsa-miR-449b-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:40853523|40853762
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MEPPLCGLAARSPHKLSPLDYCLASNKVGRCRGSFP
Nucleotide Sequence CTGGAGCCCCCGCTGTGCGGATTGGCCGCACGGTCCCCTCATAAGCTCTCCCCCCTAGACTACTGCCTCGCATCCAACAAGGTGGGTCGCTGCCGGGGCTCTTTCCCA

CircID chr15:40853523|40853762
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MFQLTVTSSDHPEDTANVTVTVLSTKQTEGEGGVRSSTWSPRCADWPHGPLISSPP
Nucleotide Sequence CTGTTCCAGCTGACAGTGACTAGCTCAGACCACCCAGAGGACACGGCCAACGTCACAGTCACTGTGCTGTCCACCAAGCAGACAGAAGGTGAGGGAGGGGTGAGGAGCAGCACCTGGAGCCCCCGCTGTGCGGATTGGCCGCACGGTCCCCTCATAAGCTCTCCCCCCTAG

CircID chr15:40853523|40853762
ORF Type ORF3
Protein Length 53
Nucleotide Length 162
Protein Sequence MRGSSLGGRAYEGTVRPIRTAGAPGAAPHPSLTFCLLGGQHSDCDVGRVLWVV
Nucleotide Sequence ATGCGAGGCAGTAGTCTAGGGGGGAGAGCTTATGAGGGGACCGTGCGGCCAATCCGCACAGCGGGGGCTCCAGGTGCTGCTCCTCACCCCTCCCTCACCTTCTGTCTGCTTGGTGGACAGCACAGTGACTGTGACGTTGGCCGTGTCCTCTGGGTGGTCTGA

CircID chr15:40853523|40853762
ORF Type ORF4
Protein Length 52
Nucleotide Length 159
Protein Sequence MRGPCGQSAQRGLQVLLLTPPSPSVCLVDSTVTVTLAVSSGWSELVTVSWNR
Nucleotide Sequence ATGAGGGGACCGTGCGGCCAATCCGCACAGCGGGGGCTCCAGGTGCTGCTCCTCACCCCTCCCTCACCTTCTGTCTGCTTGGTGGACAGCACAGTGACTGTGACGTTGGCCGTGTCCTCTGGGTGGTCTGAGCTAGTCACTGTCAGCTGGAACAGGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites