CircNet

General Information

circRNA Basic Information

CircID	chr15:41280886\|41281021
Strand	+
CircType	exon
Host Gene	ENSG00000187446.10;
Algorism	CIRI2;
Sequence	CCAGGTATGGTGGCACACGTCTGTAATCCCAGCTACTTGGGAGGCTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr15:41280886\|41281021	hsa-miR-122-5p	0	0	1
chr15:41280886\|41281021	hsa-miR-122-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-150-5p	0	0	1
chr15:41280886\|41281021	hsa-miR-150-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-498-5p	0	0	1
chr15:41280886\|41281021	hsa-miR-498-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-562	0	0	1
chr15:41280886\|41281021	hsa-miR-619-5p	0	0	1
chr15:41280886\|41281021	hsa-miR-619-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-1227-5p	0	0	1
chr15:41280886\|41281021	hsa-miR-1227-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-532-3p	0	0	1
chr15:41280886\|41281021	hsa-miR-1224-3p	0	1	1
chr15:41280886\|41281021	hsa-miR-1260	0	0	1
chr15:41280886\|41281021	hsa-miR-1280	0	0	1
chr15:41280886\|41281021	hsa-miR-24	0	0	1
chr15:41280886\|41281021	hsa-miR-638	1	0	0
chr15:41280886\|41281021	hsa-miR-1260a	0	1	0
chr15:41280886\|41281021	hsa-miR-1260b	0	1	0
chr15:41280886\|41281021	hsa-miR-4430	0	1	0
chr15:41280886\|41281021	hsa-miR-3135b	0	1	0
chr15:41280886\|41281021	hsa-miR-5193	1	0	0
chr15:41280886\|41281021	hsa-miR-143-5p	0	1	0
chr15:41280886\|41281021	hsa-miR-500b-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-504-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-3157-5p	0	1	0
chr15:41280886\|41281021	hsa-miR-6882-3p	1	0	0
chr15:41280886\|41281021	hsa-miR-4713-5p	1	1	0
chr15:41280886\|41281021	hsa-miR-1343-3p	1	1	0
chr15:41280886\|41281021	hsa-miR-939-3p	1	0	0
chr15:41280886\|41281021	hsa-miR-4715-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-5001-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-1304-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-660-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-4772-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-629-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-6738-3p	1	0	0
chr15:41280886\|41281021	hsa-miR-6794-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-1285-5p	0	1	0
chr15:41280886\|41281021	hsa-miR-1229-3p	0	1	0
chr15:41280886\|41281021	hsa-miR-3664-5p	0	1	0
chr15:41280886\|41281021	hsa-miR-5001-5p	0	1	0
chr15:41280886\|41281021	hsa-miR-6791-3p	1	1	0
chr15:41280886\|41281021	hsa-miR-6877-3p	1	1	0
chr15:41280886\|41281021	hsa-miR-6819-3p	1	0	0
chr15:41280886\|41281021	hsa-miR-6781-3p	1	0	0
chr15:41280886\|41281021	hsa-miR-5571-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:41280886\|41281021
ORF Type	ORF1
Protein Length	29
Nucleotide Length	90
Protein Sequence	MRWENCLNPGGRGCSEPRSRHCTPAWVTE
Nucleotide Sequence	CTGAGGTGGGAGAATTGCTTGAACCCAGGAGGCAGAGGTTGCAGTGAGCCAAGATCACGCCACTGCACTCCAGCCTGGGTGACAGAGTGA

CircID	chr15:41280886\|41281021
ORF Type	ORF2
Protein Length	29
Nucleotide Length	87
Protein Sequence	MQPLPPGFKQFSHLSLPSSWDYRRVPPYL
Nucleotide Sequence	CTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTG

CircID	chr15:41280886\|41281021
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MSPRLECSGVILAHCNLCLLGSSNSPTSASQVAGITDVCHHTW
Nucleotide Sequence	CTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCACCTCAGCCTCCCAAGTAGCTGGGATTACAGACGTGTGCCACCATACCTGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information