CircRNA Information

General Information
circRNA Basic Information
CircID chr15:41527212|41527515
Strand -
CircType exon
Host Gene ENSG00000103932.10;
Algorism CIRI2;
Sequence AGCCAGGATGTCAAGGACCACCGCAGGTCCTGGGTATGTCACCTCCAGCACGTAGCGCAGCCGAGGCAGCAGGCTGGTAGCCAGGAGCCCCTGGGAGTTGGAGAGAGAAACCCACTGACAAATGCAGCTGGACCCTGGGCATTGATGGCCCCTCTTTCCAGCATGTGCTTGTCCCCTGGGCCATGGGATGGGAAAGAAGCTGTCCCTTTACCTTGATGACATCATGTCGGGCCAGGTCAGGTGGAGGCCGGCTTTCTTCTTCAGGGCTTTTCCTTTTTGCTTTTCCTGCTGGGCATTCTTCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:41527212|41527515 hsa-miR-214-5p 0 0 1
chr15:41527212|41527515 hsa-miR-214-3p 0 0 1
chr15:41527212|41527515 hsa-miR-223-5p 0 0 1
chr15:41527212|41527515 hsa-miR-223-3p 0 0 1
chr15:41527212|41527515 hsa-miR-370-5p 0 0 1
chr15:41527212|41527515 hsa-miR-370-3p 0 0 1
chr15:41527212|41527515 hsa-miR-489-5p 0 0 1
chr15:41527212|41527515 hsa-miR-489-3p 0 0 1
chr15:41527212|41527515 hsa-miR-492 0 1 1
chr15:41527212|41527515 hsa-miR-583 0 0 1
chr15:41527212|41527515 hsa-miR-596 0 0 1
chr15:41527212|41527515 hsa-miR-604 0 0 1
chr15:41527212|41527515 hsa-miR-629-5p 0 0 1
chr15:41527212|41527515 hsa-miR-629-3p 0 0 1
chr15:41527212|41527515 hsa-miR-631 1 1 1
chr15:41527212|41527515 hsa-miR-634 0 0 1
chr15:41527212|41527515 hsa-miR-1287-5p 0 0 1
chr15:41527212|41527515 hsa-miR-1287-3p 0 0 1
chr15:41527212|41527515 hsa-miR-548p 0 0 1
chr15:41527212|41527515 hsa-miR-423-5p 0 0 1
chr15:41527212|41527515 hsa-miR-875-3p 0 0 1
chr15:41527212|41527515 hsa-miR-515-5p 0 0 1
chr15:41527212|41527515 hsa-miR-323-5p 0 0 1
chr15:41527212|41527515 hsa-miR-365 0 0 1
chr15:41527212|41527515 hsa-miR-1253 0 1 0
chr15:41527212|41527515 hsa-miR-3153 0 1 0
chr15:41527212|41527515 hsa-miR-3185 1 1 0
chr15:41527212|41527515 hsa-miR-3661 1 0 0
chr15:41527212|41527515 hsa-miR-4530 0 1 0
chr15:41527212|41527515 hsa-miR-3978 0 1 0
chr15:41527212|41527515 hsa-miR-6077 1 0 0
chr15:41527212|41527515 hsa-miR-6124 0 1 0
chr15:41527212|41527515 hsa-miR-6840-3p 1 1 0
chr15:41527212|41527515 hsa-miR-323a-5p 1 1 0
chr15:41527212|41527515 hsa-miR-6510-5p 0 1 0
chr15:41527212|41527515 hsa-miR-139-3p 1 0 0
chr15:41527212|41527515 hsa-miR-874-3p 1 0 0
chr15:41527212|41527515 hsa-miR-6849-3p 0 1 0
chr15:41527212|41527515 hsa-miR-7110-3p 0 1 0
chr15:41527212|41527515 hsa-miR-6765-3p 0 1 0
chr15:41527212|41527515 hsa-miR-6882-3p 0 1 0
chr15:41527212|41527515 hsa-miR-345-3p 0 1 0
chr15:41527212|41527515 hsa-miR-4668-5p 0 1 0
chr15:41527212|41527515 hsa-miR-4638-5p 0 1 0
chr15:41527212|41527515 hsa-miR-5571-3p 0 1 0
chr15:41527212|41527515 hsa-miR-6508-3p 0 1 0
chr15:41527212|41527515 hsa-miR-4529-5p 0 1 0
chr15:41527212|41527515 hsa-miR-6839-3p 0 1 0
chr15:41527212|41527515 hsa-miR-6813-5p 0 1 0
chr15:41527212|41527515 hsa-miR-6851-5p 0 1 0
chr15:41527212|41527515 hsa-miR-6754-3p 0 1 0
chr15:41527212|41527515 hsa-miR-1915-3p 0 1 0
chr15:41527212|41527515 hsa-miR-328-5p 1 0 0
chr15:41527212|41527515 hsa-miR-4745-3p 0 1 0
chr15:41527212|41527515 hsa-miR-4745-5p 1 0 0
chr15:41527212|41527515 hsa-miR-4646-5p 0 1 0
chr15:41527212|41527515 hsa-miR-3184-5p 0 1 0
chr15:41527212|41527515 hsa-miR-3689d 0 1 0
chr15:41527212|41527515 hsa-miR-6893-3p 0 1 0
chr15:41527212|41527515 hsa-miR-3622a-3p 0 1 0
chr15:41527212|41527515 hsa-miR-4768-5p 0 1 0
chr15:41527212|41527515 hsa-miR-6764-5p 0 1 0
chr15:41527212|41527515 hsa-miR-6833-3p 0 1 0
chr15:41527212|41527515 hsa-miR-3622b-3p 0 1 0
chr15:41527212|41527515 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:41527212|41527515
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MGVGERNPLTNAAGPWALMAPLSSMCLSPGPWDGKEAVPLP
Nucleotide Sequence CTGGGAGTTGGAGAGAGAAACCCACTGACAAATGCAGCTGGACCCTGGGCATTGATGGCCCCTCTTTCCAGCATGTGCTTGTCCCCTGGGCCATGGGATGGGAAAGAAGCTGTCCCTTTACCTTGA

CircID chr15:41527212|41527515
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MGHGMGKKLSLYLDDIMSGQVRWRPAFFFRAFPFCFSCWAFFI
Nucleotide Sequence CTGGGCCATGGGATGGGAAAGAAGCTGTCCCTTTACCTTGATGACATCATGTCGGGCCAGGTCAGGTGGAGGCCGGCTTTCTTCTTCAGGGCTTTTCCTTTTTGCTTTTCCTGCTGGGCATTCTTCATC

CircID chr15:41527212|41527515
ORF Type ORF3
Protein Length 56
Nucleotide Length 168
Protein Sequence MGIDGPSFQHVLVPWAMGWERSCPFTLMTSCRARSGGGRLSSSGLFLFAFPAGHSS
Nucleotide Sequence CTGGGCATTGATGGCCCCTCTTTCCAGCATGTGCTTGTCCCCTGGGCCATGGGATGGGAAAGAAGCTGTCCCTTTACCTTGATGACATCATGTCGGGCCAGGTCAGGTGGAGGCCGGCTTTCTTCTTCAGGGCTTTTCCTTTTTGCTTTTCCTGCTGGGCATTCTTCA

CircID chr15:41527212|41527515
ORF Type ORF4
Protein Length 74
Nucleotide Length 225
Protein Sequence MARHDVIKVKGQLLSHPMAQGTSTCWKEGPSMPRVQLHLSVGFSLQLPGAPGYQPAASAALRAGGDIPRTCGGP
Nucleotide Sequence CTGGCCCGACATGATGTCATCAAGGTAAAGGGACAGCTTCTTTCCCATCCCATGGCCCAGGGGACAAGCACATGCTGGAAAGAGGGGCCATCAATGCCCAGGGTCCAGCTGCATTTGTCAGTGGGTTTCTCTCTCCAACTCCCAGGGGCTCCTGGCTACCAGCCTGCTGCCTCGGCTGCGCTACGTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTCCTTGA

CircID chr15:41527212|41527515
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MKNAQQEKQKGKALKKKAGLHLTWPDMMSSR
Nucleotide Sequence ATGAAGAATGCCCAGCAGGAAAAGCAAAAAGGAAAAGCCCTGAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGACATGATGTCATCAAGGTAA

CircID chr15:41527212|41527515
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MATSLLPRLRYVLEVTYPGPAVVLDILA
Nucleotide Sequence CTGGCTACCAGCCTGCTGCCTCGGCTGCGCTACGTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTCCTTGACATCCTGGCT

CircID chr15:41527212|41527515
ORF Type ORF7
Protein Length 41
Nucleotide Length 126
Protein Sequence MLERGAINAQGPAAFVSGFLSPTPRGSWLPACCLGCATCWR
Nucleotide Sequence ATGCTGGAAAGAGGGGCCATCAATGCCCAGGGTCCAGCTGCATTTGTCAGTGGGTTTCTCTCTCCAACTCCCAGGGGCTCCTGGCTACCAGCCTGCTGCCTCGGCTGCGCTACGTGCTGGAGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites