CircRNA Information

General Information
circRNA Basic Information
CircID chr15:41811038|41811312
Strand -
CircType exon
Host Gene ENSG00000137802.12;
Algorism CIRI2;
Sequence CTGGTTGGGTCCTAAAGCCAGATGGGGAAGTGCCACATGTGCCATTGGTGTCTGCTGGTCTCACCTTTTGAGAGGCTGGGAGGGGGCTAGGCTTAGGCCAGGCTGCCAGTGCCCCTCTGAGCCTGCCCCATCTCTTGCAGGAAAACCATCACTGCCCTTGCCTTCTCCCCTGATGGCAAGTACTTGGTCACTGGAGAGGTGAGTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAGAGAGCTGCGGTCCTAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:41811038|41811312 hsa-miR-34a-5p 0 0 1
chr15:41811038|41811312 hsa-miR-34a-3p 0 0 1
chr15:41811038|41811312 hsa-miR-183-5p 0 0 1
chr15:41811038|41811312 hsa-miR-183-3p 0 0 1
chr15:41811038|41811312 hsa-miR-144-5p 0 0 1
chr15:41811038|41811312 hsa-miR-144-3p 0 0 1
chr15:41811038|41811312 hsa-miR-149-5p 0 0 1
chr15:41811038|41811312 hsa-miR-149-3p 0 0 1
chr15:41811038|41811312 hsa-miR-449a 0 1 1
chr15:41811038|41811312 hsa-miR-484 1 1 1
chr15:41811038|41811312 hsa-miR-634 0 0 1
chr15:41811038|41811312 hsa-miR-651-5p 0 0 1
chr15:41811038|41811312 hsa-miR-651-3p 0 0 1
chr15:41811038|41811312 hsa-miR-449b-5p 0 0 1
chr15:41811038|41811312 hsa-miR-449b-3p 0 0 1
chr15:41811038|41811312 hsa-miR-658 0 1 1
chr15:41811038|41811312 hsa-miR-766-5p 0 0 1
chr15:41811038|41811312 hsa-miR-766-3p 0 0 1
chr15:41811038|41811312 hsa-miR-922 0 0 1
chr15:41811038|41811312 hsa-miR-1236-5p 0 0 1
chr15:41811038|41811312 hsa-miR-1236-3p 0 0 1
chr15:41811038|41811312 hsa-miR-1202 0 0 1
chr15:41811038|41811312 hsa-miR-1278 0 0 1
chr15:41811038|41811312 hsa-miR-1197 0 1 1
chr15:41811038|41811312 hsa-miR-1825 0 0 1
chr15:41811038|41811312 hsa-miR-769-5p 0 0 1
chr15:41811038|41811312 hsa-miR-486-3p 0 1 1
chr15:41811038|41811312 hsa-miR-885-3p 0 0 1
chr15:41811038|41811312 hsa-miR-199a-5p 0 0 1
chr15:41811038|41811312 hsa-miR-423-5p 0 1 1
chr15:41811038|41811312 hsa-miR-582-5p 0 0 1
chr15:41811038|41811312 hsa-miR-199b-5p 0 0 1
chr15:41811038|41811312 hsa-miR-34c-5p 0 0 1
chr15:41811038|41811312 hsa-miR-371-5p 0 0 1
chr15:41811038|41811312 hsa-miR-24 0 0 1
chr15:41811038|41811312 hsa-miR-101 0 0 1
chr15:41811038|41811312 hsa-miR-554 0 1 0
chr15:41811038|41811312 hsa-miR-1248 0 1 0
chr15:41811038|41811312 hsa-miR-3132 1 0 0
chr15:41811038|41811312 hsa-miR-3135a 0 1 0
chr15:41811038|41811312 hsa-miR-3155a 0 1 0
chr15:41811038|41811312 hsa-miR-3175 0 1 0
chr15:41811038|41811312 hsa-miR-3176 0 1 0
chr15:41811038|41811312 hsa-miR-3155b 0 1 0
chr15:41811038|41811312 hsa-miR-4516 0 1 0
chr15:41811038|41811312 hsa-miR-3972 0 1 0
chr15:41811038|41811312 hsa-miR-4660 0 1 0
chr15:41811038|41811312 hsa-miR-4688 0 1 0
chr15:41811038|41811312 hsa-miR-5190 0 1 0
chr15:41811038|41811312 hsa-miR-5703 0 1 0
chr15:41811038|41811312 hsa-miR-103a-2-5p 1 1 0
chr15:41811038|41811312 hsa-miR-18a-3p 0 1 0
chr15:41811038|41811312 hsa-miR-4700-3p 1 0 0
chr15:41811038|41811312 hsa-miR-6728-5p 1 0 0
chr15:41811038|41811312 hsa-miR-4786-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6890-5p 0 1 0
chr15:41811038|41811312 hsa-miR-8069 1 0 0
chr15:41811038|41811312 hsa-miR-3189-5p 1 0 0
chr15:41811038|41811312 hsa-miR-6832-3p 0 1 0
chr15:41811038|41811312 hsa-miR-4711-5p 0 1 0
chr15:41811038|41811312 hsa-miR-877-3p 0 1 0
chr15:41811038|41811312 hsa-miR-6798-5p 1 1 0
chr15:41811038|41811312 hsa-miR-6770-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6760-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6765-3p 1 0 0
chr15:41811038|41811312 hsa-miR-3194-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6858-3p 1 1 0
chr15:41811038|41811312 hsa-miR-6786-5p 1 0 0
chr15:41811038|41811312 hsa-miR-6894-3p 1 1 0
chr15:41811038|41811312 hsa-miR-7113-3p 1 0 0
chr15:41811038|41811312 hsa-miR-6878-5p 0 1 0
chr15:41811038|41811312 hsa-miR-4687-5p 0 1 0
chr15:41811038|41811312 hsa-miR-5000-3p 0 1 0
chr15:41811038|41811312 hsa-miR-670-3p 0 1 0
chr15:41811038|41811312 hsa-miR-214-3p 1 1 0
chr15:41811038|41811312 hsa-miR-3675-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6800-3p 0 1 0
chr15:41811038|41811312 hsa-miR-1207-5p 1 0 0
chr15:41811038|41811312 hsa-miR-4763-3p 1 1 0
chr15:41811038|41811312 hsa-miR-6893-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6743-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6722-3p 1 0 0
chr15:41811038|41811312 hsa-miR-6879-5p 0 1 0
chr15:41811038|41811312 hsa-miR-4728-5p 1 0 0
chr15:41811038|41811312 hsa-miR-6780b-5p 0 1 0
chr15:41811038|41811312 hsa-miR-328-5p 1 0 0
chr15:41811038|41811312 hsa-miR-4632-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6885-5p 1 1 0
chr15:41811038|41811312 hsa-miR-7843-5p 0 1 0
chr15:41811038|41811312 hsa-miR-6736-5p 1 0 0
chr15:41811038|41811312 hsa-miR-3184-5p 0 1 0
chr15:41811038|41811312 hsa-miR-2682-3p 0 1 0
chr15:41811038|41811312 hsa-miR-6829-3p 0 1 0
chr15:41811038|41811312 hsa-miR-6512-3p 0 1 0
chr15:41811038|41811312 hsa-miR-6751-3p 0 1 0
chr15:41811038|41811312 hsa-miR-3085-3p 1 0 0
chr15:41811038|41811312 hsa-miR-3619-5p 1 0 0
chr15:41811038|41811312 hsa-miR-103a-1-5p 1 1 0
chr15:41811038|41811312 hsa-miR-3922-3p 0 1 0
chr15:41811038|41811312 hsa-miR-514b-5p 0 1 0
chr15:41811038|41811312 hsa-miR-520c-3p 0 1 0
chr15:41811038|41811312 hsa-miR-5197-5p 0 1 0
chr15:41811038|41811312 hsa-miR-101-3p 0 1 0
chr15:41811038|41811312 hsa-miR-371b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:41811038|41811312
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MVTGEVSEEEGWQYCKEGRCPGLRRELRS
Nucleotide Sequence TTGGTCACTGGAGAGGTGAGTGAGGAAGAGGGCTGGCAGTACTGTAAAGAGGGCAGGTGTCCTGGCCTCCGCAGAGAGCTGCGGTCCTAG
CircID chr15:41811038|41811312
ORF Type ORF2
Protein Length 65
Nucleotide Length 198
Protein Sequence MGPKARWGSATCAIGVCWSHLLRGWEGARLRPGCQCPSEPAPSLAGKPSLPLPSPLMASTWSLER
Nucleotide Sequence TTGGGTCCTAAAGCCAGATGGGGAAGTGCCACATGTGCCATTGGTGTCTGCTGGTCTCACCTTTTGAGAGGCTGGGAGGGGGCTAGGCTTAGGCCAGGCTGCCAGTGCCCCTCTGAGCCTGCCCCATCTCTTGCAGGAAAACCATCACTGCCCTTGCCTTCTCCCCTGATGGCAAGTACTTGGTCACTGGAGAGGTGA
CircID chr15:41811038|41811312
ORF Type ORF3
Protein Length 54
Nucleotide Length 165
Protein Sequence MRRPGHLPSLQYCQPSSSLTSPVTKYLPSGEKARAVMVFLQEMGQAQRGTGSLA
Nucleotide Sequence CTGCGGAGGCCAGGACACCTGCCCTCTTTACAGTACTGCCAGCCCTCTTCCTCACTCACCTCTCCAGTGACCAAGTACTTGCCATCAGGGGAGAAGGCAAGGGCAGTGATGGTTTTCCTGCAAGAGATGGGGCAGGCTCAGAGGGGCACTGGCAGCCTGGCCTAA
CircID chr15:41811038|41811312
ORF Type ORF4
Protein Length 36
Nucleotide Length 108
Protein Sequence MAAWPKPSPLPASQKVRPADTNGTCGTSPSGFRTQP
Nucleotide Sequence CTGGCAGCCTGGCCTAAGCCTAGCCCCCTCCCAGCCTCTCAAAAGGTGAGACCAGCAGACACCAATGGCACATGTGGCACTTCCCCATCTGGCTTTAGGACCCAACCA
CircID chr15:41811038|41811312
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MPALFLTHLSSDQVLAIRGEGKGSDGFPARDGAGSEGHWQPGLSLAPSQPLKR
Nucleotide Sequence CTGCCAGCCCTCTTCCTCACTCACCTCTCCAGTGACCAAGTACTTGCCATCAGGGGAGAAGGCAAGGGCAGTGATGGTTTTCCTGCAAGAGATGGGGCAGGCTCAGAGGGGCACTGGCAGCCTGGCCTAAGCCTAGCCCCCTCCCAGCCTCTCAAAAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab