CircRNA Information

General Information
circRNA Basic Information
CircID chr15:42156439|42156580
Strand -
CircType exon
Host Gene ENSG00000168907.12;
Algorism CIRI2;
Sequence CCGCCAGTGCCTCCACAGAGGGCCCCTCTTCTCTCTCTTCTGAAGCAGCACTGCCCCCAGGAGGGGCAGCATCTTGTCTGCCAGCCACCTTGGCCAGAGTGCCCAAAGCATGGCTGGGCAGCCCGGGCCCCAGCAGGGAACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:42156439|42156580 hsa-miR-34a-5p 0 0 1
chr15:42156439|42156580 hsa-miR-34a-3p 0 0 1
chr15:42156439|42156580 hsa-miR-370-5p 0 0 1
chr15:42156439|42156580 hsa-miR-370-3p 0 0 1
chr15:42156439|42156580 hsa-miR-449a 0 0 1
chr15:42156439|42156580 hsa-miR-637 1 1 1
chr15:42156439|42156580 hsa-miR-650 1 0 1
chr15:42156439|42156580 hsa-miR-449b-5p 0 0 1
chr15:42156439|42156580 hsa-miR-449b-3p 0 0 1
chr15:42156439|42156580 hsa-miR-1253 0 0 1
chr15:42156439|42156580 hsa-miR-512-3p 0 1 1
chr15:42156439|42156580 hsa-miR-486-3p 0 1 1
chr15:42156439|42156580 hsa-miR-423-5p 0 0 1
chr15:42156439|42156580 hsa-miR-324-3p 0 0 1
chr15:42156439|42156580 hsa-miR-34c-5p 0 1 1
chr15:42156439|42156580 hsa-miR-1274a 0 0 1
chr15:42156439|42156580 hsa-miR-661 1 0 0
chr15:42156439|42156580 hsa-miR-762 1 0 0
chr15:42156439|42156580 hsa-miR-1538 1 1 0
chr15:42156439|42156580 hsa-miR-3132 1 0 0
chr15:42156439|42156580 hsa-miR-3166 0 1 0
chr15:42156439|42156580 hsa-miR-3196 1 0 0
chr15:42156439|42156580 hsa-miR-4443 0 1 0
chr15:42156439|42156580 hsa-miR-4488 1 0 0
chr15:42156439|42156580 hsa-miR-4498 1 1 0
chr15:42156439|42156580 hsa-miR-4519 1 0 0
chr15:42156439|42156580 hsa-miR-4644 0 1 0
chr15:42156439|42156580 hsa-miR-4674 1 0 0
chr15:42156439|42156580 hsa-miR-4688 1 0 0
chr15:42156439|42156580 hsa-miR-4689 1 0 0
chr15:42156439|42156580 hsa-miR-4721 1 0 0
chr15:42156439|42156580 hsa-miR-4741 1 0 0
chr15:42156439|42156580 hsa-miR-5090 1 0 0
chr15:42156439|42156580 hsa-miR-5698 1 0 0
chr15:42156439|42156580 hsa-miR-5739 1 0 0
chr15:42156439|42156580 hsa-miR-6081 1 0 0
chr15:42156439|42156580 hsa-miR-6085 1 0 0
chr15:42156439|42156580 hsa-miR-8085 1 0 0
chr15:42156439|42156580 hsa-miR-8089 1 0 0
chr15:42156439|42156580 hsa-miR-143-5p 1 0 0
chr15:42156439|42156580 hsa-miR-4747-3p 1 1 0
chr15:42156439|42156580 hsa-miR-31-5p 0 1 0
chr15:42156439|42156580 hsa-miR-6825-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6746-5p 1 0 0
chr15:42156439|42156580 hsa-miR-4709-3p 1 1 0
chr15:42156439|42156580 hsa-miR-7160-5p 0 1 0
chr15:42156439|42156580 hsa-miR-6727-5p 1 0 0
chr15:42156439|42156580 hsa-miR-3187-3p 1 0 0
chr15:42156439|42156580 hsa-miR-6721-5p 1 0 0
chr15:42156439|42156580 hsa-miR-197-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6776-5p 1 0 0
chr15:42156439|42156580 hsa-miR-659-3p 1 0 0
chr15:42156439|42156580 hsa-miR-3180-3p 1 0 0
chr15:42156439|42156580 hsa-miR-6772-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6829-5p 1 0 0
chr15:42156439|42156580 hsa-miR-5008-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6882-3p 1 0 0
chr15:42156439|42156580 hsa-miR-1343-3p 0 1 0
chr15:42156439|42156580 hsa-miR-6835-5p 1 0 0
chr15:42156439|42156580 hsa-miR-1226-5p 1 0 0
chr15:42156439|42156580 hsa-miR-3944-3p 0 1 0
chr15:42156439|42156580 hsa-miR-4640-5p 1 0 0
chr15:42156439|42156580 hsa-miR-1250-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6499-3p 1 0 0
chr15:42156439|42156580 hsa-miR-660-3p 0 1 0
chr15:42156439|42156580 hsa-miR-4746-3p 1 0 0
chr15:42156439|42156580 hsa-miR-4761-5p 0 1 0
chr15:42156439|42156580 hsa-miR-6868-5p 0 1 0
chr15:42156439|42156580 hsa-miR-4749-3p 0 1 0
chr15:42156439|42156580 hsa-miR-10400-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6816-5p 1 0 0
chr15:42156439|42156580 hsa-miR-3180 1 0 0
chr15:42156439|42156580 hsa-miR-6743-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6803-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6815-5p 0 1 0
chr15:42156439|42156580 hsa-miR-1249-5p 0 1 0
chr15:42156439|42156580 hsa-miR-6751-5p 1 0 0
chr15:42156439|42156580 hsa-miR-3127-3p 0 1 0
chr15:42156439|42156580 hsa-miR-1237-5p 1 0 0
chr15:42156439|42156580 hsa-miR-1909-3p 1 0 0
chr15:42156439|42156580 hsa-miR-328-5p 1 0 0
chr15:42156439|42156580 hsa-miR-449c-5p 1 0 0
chr15:42156439|42156580 hsa-miR-4745-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6729-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6738-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6846-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6848-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6858-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6845-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6885-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6731-5p 1 0 0
chr15:42156439|42156580 hsa-miR-6856-5p 1 1 0
chr15:42156439|42156580 hsa-miR-1914-3p 1 0 0
chr15:42156439|42156580 hsa-miR-2682-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:42156439|42156580
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MKQHCPQEGQHLVCQPPWPECPKHGWAARAPAGN
Nucleotide Sequence CTGAAGCAGCACTGCCCCCAGGAGGGGCAGCATCTTGTCTGCCAGCCACCTTGGCCAGAGTGCCCAAAGCATGGCTGGGCAGCCCGGGCCCCAGCAGGGAAC
CircID chr15:42156439|42156580
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MPPGGAASCLPATLARVPKAWLGSPGPSRE
Nucleotide Sequence CTGCCCCCAGGAGGGGCAGCATCTTGTCTGCCAGCCACCTTGGCCAGAGTGCCCAAAGCATGGCTGGGCAGCCCGGGCCCCAGCAGGGAA
CircID chr15:42156439|42156580
ORF Type ORF3
Protein Length 45
Nucleotide Length 135
Protein Sequence MLGPGLPSHALGTLAKVAGRQDAAPPGGSAASEEREEGPSVEALA
Nucleotide Sequence CTGCTGGGGCCCGGGCTGCCCAGCCATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCTGGGGGCAGTGCTGCTTCAGAAGAGAGAGAAGAGGGGCCCTCTGTGGAGGCACTGGCG
CircID chr15:42156439|42156580
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MLWALWPRWLADKMLPLLGAVLLQKREKRGPLWRHWR
Nucleotide Sequence ATGCTTTGGGCACTCTGGCCAAGGTGGCTGGCAGACAAGATGCTGCCCCTCCTGGGGGCAGTGCTGCTTCAGAAGAGAGAGAAGAGGGGCCCTCTGTGGAGGCACTGGCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab