CircRNA Information

General Information
circRNA Basic Information
CircID chr15:44487359|44487516
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCTGCCACCCAGAAGACAGGACCATTCCATTCTTTTTATTTTTTTTTACGTGGACCCCCTACTTGGCTGTCCAAGCTTGAGTGCAGTGGTACAATCACAGCACACTGCAGCCTCAAACTCCTGGGTTCAAACTGCTGGATTGAAGCATTCCTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:44487359|44487516 hsa-miR-186-5p 0 0 1
chr15:44487359|44487516 hsa-miR-186-3p 0 0 1
chr15:44487359|44487516 hsa-miR-206 0 0 1
chr15:44487359|44487516 hsa-miR-613 0 0 1
chr15:44487359|44487516 hsa-miR-648 0 0 1
chr15:44487359|44487516 hsa-miR-665 1 1 1
chr15:44487359|44487516 hsa-miR-1293 0 0 1
chr15:44487359|44487516 hsa-miR-1304-5p 0 0 1
chr15:44487359|44487516 hsa-miR-1304-3p 0 0 1
chr15:44487359|44487516 hsa-miR-615-5p 0 0 1
chr15:44487359|44487516 hsa-miR-485-5p 0 0 1
chr15:44487359|44487516 hsa-miR-338-3p 0 0 1
chr15:44487359|44487516 hsa-miR-1207-5p 0 0 1
chr15:44487359|44487516 hsa-miR-508-3p 0 0 1
chr15:44487359|44487516 hsa-miR-1 0 0 1
chr15:44487359|44487516 hsa-miR-219-5p 0 0 1
chr15:44487359|44487516 hsa-miR-3138 1 1 0
chr15:44487359|44487516 hsa-miR-4278 0 1 0
chr15:44487359|44487516 hsa-miR-4538 0 1 0
chr15:44487359|44487516 hsa-miR-4739 1 0 0
chr15:44487359|44487516 hsa-miR-5697 0 1 0
chr15:44487359|44487516 hsa-miR-7703 0 1 0
chr15:44487359|44487516 hsa-miR-8070 0 1 0
chr15:44487359|44487516 hsa-miR-4433b-3p 1 0 0
chr15:44487359|44487516 hsa-miR-6840-3p 1 1 0
chr15:44487359|44487516 hsa-miR-4433a-3p 0 1 0
chr15:44487359|44487516 hsa-miR-6514-5p 0 1 0
chr15:44487359|44487516 hsa-miR-4793-3p 0 1 0
chr15:44487359|44487516 hsa-miR-30b-3p 0 1 0
chr15:44487359|44487516 hsa-miR-149-3p 1 0 0
chr15:44487359|44487516 hsa-miR-6499-3p 0 1 0
chr15:44487359|44487516 hsa-miR-1273h-5p 0 1 0
chr15:44487359|44487516 hsa-miR-6778-5p 0 1 0
chr15:44487359|44487516 hsa-miR-6779-5p 1 0 0
chr15:44487359|44487516 hsa-miR-6780a-5p 1 0 0
chr15:44487359|44487516 hsa-miR-6797-5p 1 0 0
chr15:44487359|44487516 hsa-miR-4728-5p 1 0 0
chr15:44487359|44487516 hsa-miR-328-5p 1 0 0
chr15:44487359|44487516 hsa-miR-3689a-3p 0 1 0
chr15:44487359|44487516 hsa-miR-6795-5p 1 0 0
chr15:44487359|44487516 hsa-miR-6855-5p 1 0 0
chr15:44487359|44487516 hsa-miR-324-3p 0 1 0
chr15:44487359|44487516 hsa-miR-6884-5p 0 1 0
chr15:44487359|44487516 hsa-miR-6807-3p 0 1 0
chr15:44487359|44487516 hsa-miR-5699-3p 0 1 0
chr15:44487359|44487516 hsa-miR-1912-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:44487359|44487516
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSKLECSGTITAHCSLKLLGSNCWIEAFLP
Nucleotide Sequence CTGTCCAAGCTTGAGTGCAGTGGTACAATCACAGCACACTGCAGCCTCAAACTCCTGGGTTCAAACTGCTGGATTGAAGCATTCCTCCCA

CircID chr15:44487359|44487516
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence LPPRRQDHSILFIFFYVDPLLGCPSLSAVVQSQHTAASNSWVQTAGLKHSSH
Nucleotide Sequence CTGCCACCCAGAAGACAGGACCATTCCATTCTTTTTATTTTTTTTTACGTGGACCCCCTACTTGGCTGTCCAAGCTTGAGTGCAGTGGTACAATCACAGCACACTGCAGCCTCAAACTCCTGGGTTCAAACTGCTGGATTGAAGCATTCCTCCCAC

CircID chr15:44487359|44487516
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MRLQCAVIVPLHSSLDSQVGGPRKKK
Nucleotide Sequence TTGAGGCTGCAGTGTGCTGTGATTGTACCACTGCACTCAAGCTTGGACAGCCAAGTAGGGGGTCCACGTAAAAAAAAATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites