CircNet

General Information

circRNA Basic Information

CircID	chr15:49009216\|49019552
Strand	-
CircType	exon
Host Gene	ENSG00000138593.8;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTGGATTCAGATGCCGAGGACACAGTACTTCCTCAGAAAGAAGACAGAATTTGCAAAAGAGACCAGATAATAAGCATTTAAGCTCTAGTCAATCCCATAGAAGCGATCCAAATTCTGAGTCTTTATATTTTGAGTATTTTAGCATGTGAGAAATGACATTTCCTCTTTAAGACCGACTTTGAATAATTCAGTAATAGAATACAAGAAATAACTTCCTCATTTTTCAATACTTCTAAGCATTATAAAAAGTTTAGGAGTTTGCCTTGAACTCTTTTTACTTAAAATGTGAAACATTTCAGGATGAAGATGGGTTTCAAGAACTAAATGAGAATGGAAATGCTAAGGATGAGAATATTCAACAAAAACTTTCTTCTAAAGTAGGGATCACTAACAAATGTGTTTTTTCTGGTTATCATAGTTGGATGATTTACCTGAAAACTCACCAATCAATATAGTTCAGACTCCAATTCCTATTACCACCTCAGTTCCCAAACGTGCAAAAAGTCAGAAGAAGAAAGCTTTAGCAGCAGCCCTTGCCACAGCTCAAGAGTATTCAGAAATAAGTATGGAGCAAAAAAAATTACAGGAAGCTTTATCAAAAGCAGCTGGAAAAAAGAATAAAACACCTGTGCAGCTAGATTTAGGGGACATGTTAGCTGCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGATATCATTAGTCTGAGCAATTTGCTGTTTGTCTCTGCTAATATATGTTAGATGTTGTTAATCGAAATTTTTAAAATTTTATATATGTATGTGTATATATATGTGTGTGTGTGTGTATATATATTGTGAAGTTTCAAAGGTAGAATGGTTCTGACTGAAGACCAGTTGCAAGGAATTGCCATGTTTGAGGGTTGTACAGGAGAGTAGAACTAATTATTTACCCCTATAATGGACTTCTAAATTGGTTAATTGCATTGGCTTAGTCTCTAAAGGATAGGTAAAAGCTGTATCTGAGGGACACTGCCTAGCCATGTATAGTGCTCCTACTGTTATGATGTCGTTTTTTCCATGGGAGGAGGATGTTCTTGTTTTTGTAGTTATTGGAAATTTTGAAAGTATGTGGGATTGGCCCTAATGGTGAAACTAATGTTCCTCTTTGTTTTTAGTGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAACCAAAAGTCAGCCCTGTTTGACATCCTTTAATTCTGTGGACATTGCTTCTTCTAAAGCAAAAAAAGGAAAAGAGAAGGAAATTGCAAAACTAAAACGACCCACAGCACTTAAAAAGGTTATTTTAAAAGAAAGAGAGGAAAAGAAGGGGCGCTTAACTGTGGACCACAATCTTTTGGGATCCGAGGAACCAACAGAAATGCACTTAGATTTTATTGATGACTTGCCACAGGAGATTGTTTCCCAGGAAGGTAAGGAGCTCCCCCTTTCTCCTCTTCTCATGGAATGGTCTGAAATATTTTAATAGATACGTAAGCTATCACTAGTTAATGCTCCTGATTGGAAGACGTGCTCCATATTTTACATAAATCTCTTTATTCTTCAGAGTGGTTTCTTTTAAAGATGCTTTTGTAGGGAGATGGTTAAAGAGAAGGGATACTGGACTAAGCATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGGCTCTCCTGCTAGTTCTGGAATAGGCAGTCCAATGGCATCTTCAACAATAACCAAAATCCACAGCAAAAGATTTAGAGA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr15:49009216\|49019552	hsa-miR-147a	1	1
chr15:49009216\|49019552	hsa-miR-218-2-3p	1	1
chr15:49009216\|49019552	hsa-miR-125a-3p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:49009216\|49019552
ORF Type	ORF1
Protein Length	91
Nucleotide Length	273
Protein Sequence	MRRGERGSSLPSWETISCGKSSIKSKCISVGSSDPKRLWSTVKRPFFSSLSFKITFLSAVGRFSFAISFSFPFFALEEAMSTELKDVKQG*
Nucleotide Sequence	ATGAGAAGAGGAGAAAGGGGGAGCTCCTTACCTTCCTGGGAAACAATCTCCTGTGGCAAGTCATCAATAAAATCTAAGTGCATTTCTGTTGGTTCCTCGGATCCCAAAAGATTGTGGTCCACAGTTAAGCGCCCCTTCTTTTCCTCTCTTTCTTTTAAAATAACCTTTTTAAGTGCTGTGGGTCGTTTTAGTTTTGCAATTTCCTTCTCTTTTCCTTTTTTTGCTTTAGAAGAAGCAATGTCCACAGAATTAAAGGATGTCAAACAGGGCTGA

CircID	chr15:49009216\|49019552
ORF Type	ORF2
Protein Length	122
Nucleotide Length	366
Protein Sequence	LFLVVTAASFHTKDSTNRKPLTKSQPCLTSFNSVDIASSKAKKGKEKEIAKLKRPTALKKVILKEREEKKGRLTVDHNLLGSEEPTEMHLDFIDDLPQEIVSQEGKELPLSPLLMEWSEIF*
Nucleotide Sequence	TTGTTTTTAGTGGTTACTGCAGCTTCTTTTCACACTAAAGACTCTACTAATAGAAAACCTTTAACCAAAAGTCAGCCCTGTTTGACATCCTTTAATTCTGTGGACATTGCTTCTTCTAAAGCAAAAAAAGGAAAAGAGAAGGAAATTGCAAAACTAAAACGACCCACAGCACTTAAAAAGGTTATTTTAAAAGAAAGAGAGGAAAAGAAGGGGCGCTTAACTGTGGACCACAATCTTTTGGGATCCGAGGAACCAACAGAAATGCACTTAGATTTTATTGATGACTTGCCACAGGAGATTGTTTCCCAGGAAGGTAAGGAGCTCCCCCTTTCTCCTCTTCTCATGGAATGGTCTGAAATATTTTAA

CircID	chr15:49009216\|49019552
ORF Type	ORF3
Protein Length	72
Nucleotide Length	216
Protein Sequence	MEQKKLQEALSKAAGKKNKTPVQLDLGDMLAALEKQQQAMKARQITNTRPLSYTGDIISLSNLLFVSANIC*
Nucleotide Sequence	ATGGAGCAAAAAAAATTACAGGAAGCTTTATCAAAAGCAGCTGGAAAAAAGAATAAAACACCTGTGCAGCTAGATTTAGGGGACATGTTAGCTGCTCTGGAAAAACAACAGCAAGCAATGAAAGCACGGCAAATTACTAACACCAGACCTCTGTCATATACAGGTGATATCATTAGTCTGAGCAATTTGCTGTTTGTCTCTGCTAATATATGTTAG

CircID	chr15:49009216\|49019552
ORF Type	ORF4
Protein Length	65
Nucleotide Length	195
Protein Sequence	MISPVYDRGLVLVICRAFIACCCFSRAANMSPKSSCTGVLFFFPAAFDKASCNFFCSILISEYS*
Nucleotide Sequence	ATGATATCACCTGTATATGACAGAGGTCTGGTGTTAGTAATTTGCCGTGCTTTCATTGCTTGCTGTTGTTTTTCCAGAGCAGCTAACATGTCCCCTAAATCTAGCTGCACAGGTGTTTTATTCTTTTTTCCAGCTGCTTTTGATAAAGCTTCCTGTAATTTTTTTTGCTCCATACTTATTTCTGAATACTCTTGA

CircID	chr15:49009216\|49019552
ORF Type	ORF5
Protein Length	49
Nucleotide Length	147
Protein Sequence	MPSDTSLSPASQNSPYCMTPVSQGSPASSGIGSPMASSTITKIHSKRFR
Nucleotide Sequence	ATGCCCAGTGATACTTCACTCTCTCCAGCAAGTCAGAACTCTCCATACTGTATGACACCTGTGTCACAAGGCTCTCCTGCTAGTTCTGGAATAGGCAGTCCAATGGCATCTTCAACAATAACCAAAATCCACAGCAAAAGATTTAGA

CircID	chr15:49009216\|49019552
ORF Type	ORF6
Protein Length	45
Nucleotide Length	135
Protein Sequence	MAIPCNWSSVRTILPLKLHNIYTHTHTYIYTYIYKILKISINNI*
Nucleotide Sequence	ATGGCAATTCCTTGCAACTGGTCTTCAGTCAGAACCATTCTACCTTTGAAACTTCACAATATATATACACACACACACACATATATATACACATACATATATAAAATTTTAAAAATTTCGATTAACAACATCTAA

CircID	chr15:49009216\|49019552
ORF Type	ORF7
Protein Length	43
Nucleotide Length	129
Protein Sequence	MLSPVSLLFNHLPTKASLKETTLKNKEIYVKYGARLPIRSIN*
Nucleotide Sequence	ATGCTTAGTCCAGTATCCCTTCTCTTTAACCATCTCCCTACAAAAGCATCTTTAAAAGAAACCACTCTGAAGAATAAAGAGATTTATGTAAAATATGGAGCACGTCTTCCAATCAGGAGCATTAACTAG

CircID	chr15:49009216\|49019552
ORF Type	ORF8
Protein Length	36
Nucleotide Length	108
Protein Sequence	MTCHRRLFPRKVRSSPFLLFSWNGLKYFNRYVSYH*
Nucleotide Sequence	ATGACTTGCCACAGGAGATTGTTTCCCAGGAAGGTAAGGAGCTCCCCCTTTCTCCTCTTCTCATGGAATGGTCTGAAATATTTTAATAGATACGTAAGCTATCACTAG

CircID	chr15:49009216\|49019552
ORF Type	ORF9
Protein Length	35
Nucleotide Length	105
Protein Sequence	MYSAPTVMMSFFPWEEDVLVFVVIGNFESMWDWP*
Nucleotide Sequence	ATGTATAGTGCTCCTACTGTTATGATGTCGTTTTTTCCATGGGAGGAGGATGTTCTTGTTTTTGTAGTTATTGGAAATTTTGAAAGTATGTGGGATTGGCCCTAA

CircID	chr15:49009216\|49019552
ORF Type	ORF10
Protein Length	33
Nucleotide Length	99
Protein Sequence	MARQCPSDTAFTYPLETKPMQLTNLEVHYRGK*
Nucleotide Sequence	ATGGCTAGGCAGTGTCCCTCAGATACAGCTTTTACCTATCCTTTAGAGACTAAGCCAATGCAATTAACCAATTTAGAAGTCCATTATAGGGGTAAATAA

CircID	chr15:49009216\|49019552
ORF Type	ORF11
Protein Length	33
Nucleotide Length	99
Protein Sequence	MESSDLLERVKYHWACLVQYPFSLTISLQKHL*
Nucleotide Sequence	ATGGAGAGTTCTGACTTGCTGGAGAGAGTGAAGTATCACTGGGCATGCTTAGTCCAGTATCCCTTCTCTTTAACCATCTCCCTACAAAAGCATCTTTAA

CircID	chr15:49009216\|49019552
ORF Type	ORF12
Protein Length	32
Nucleotide Length	96
Protein Sequence	MITRKNTFVSDPYFRRKFLLNILILSISILI*
Nucleotide Sequence	ATGATAACCAGAAAAAACACATTTGTTAGTGATCCCTACTTTAGAAGAAAGTTTTTGTTGAATATTCTCATCCTTAGCATTTCCATTCTCATTTAG

CircID	chr15:49009216\|49019552
ORF Type	ORF13
Protein Length	73
Nucleotide Length	219
Protein Sequence	VLSLLAVVFPEQLTCPLNLAAQVFYSFFQLLLIKLPVIFFAPYLFLNTLELWQGLLLKLSSSDFLHVWELRW*
Nucleotide Sequence	GTGCTTTCATTGCTTGCTGTTGTTTTTCCAGAGCAGCTAACATGTCCCCTAAATCTAGCTGCACAGGTGTTTTATTCTTTTTTCCAGCTGCTTTTGATAAAGCTTCCTGTAATTTTTTTTGCTCCATACTTATTTCTGAATACTCTTGAGCTGTGGCAAGGGCTGCTGCTAAAGCTTTCTTCTTCTGACTTTTTGCACGTTTGGGAACTGAGGTGGTAA

CircID	chr15:49009216\|49019552
ORF Type	ORF14
Protein Length	64
Nucleotide Length	192
Protein Sequence	LNSFYLKCETFQDEDGFQELNENGNAKDENIQQKLSSKVGITNKCVFSGYHSWMIYLKTHQSI*
Nucleotide Sequence	TTGAACTCTTTTTACTTAAAATGTGAAACATTTCAGGATGAAGATGGGTTTCAAGAACTAAATGAGAATGGAAATGCTAAGGATGAGAATATTCAACAAAAACTTTCTTCTAAAGTAGGGATCACTAACAAATGTGTTTTTTCTGGTTATCATAGTTGGATGATTTACCTGAAAACTCACCAATCAATATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr15:49009216\|49019552	U2AF2	13	2	9
chr15:49009216\|49019552	MOV10	0	1	0
chr15:49009216\|49019552	ELAVL1	5	1	4
chr15:49009216\|49019552	CELF2	0	0	1
chr15:49009216\|49019552	PRPF8	0	0	5
chr15:49009216\|49019552	SRSF10	0	0	1
chr15:49009216\|49019552	TAF15	0	1	0
chr15:49009216\|49019552	FMR1	0	0	5
chr15:49009216\|49019552	CPSF6	1	0	1
chr15:49009216\|49019552	NONO	2	0	0
chr15:49009216\|49019552	GNL3	0	0	1
chr15:49009216\|49019552	SRSF7	0	0	1
chr15:49009216\|49019552	SRSF1	1	0	5
chr15:49009216\|49019552	NOP58	2	0	11
chr15:49009216\|49019552	CSTF2	0	1	0
chr15:49009216\|49019552	U2AF1	1	0	3
chr15:49009216\|49019552	ADAR	0	0	2
chr15:49009216\|49019552	KHSRP	1	0	3
chr15:49009216\|49019552	NOP56	2	0	1
chr15:49009216\|49019552	DDX54	0	0	11
chr15:49009216\|49019552	GRWD1	0	0	1
chr15:49009216\|49019552	HNRNPK	2	0	0
chr15:49009216\|49019552	HNRNPL	0	0	8
chr15:49009216\|49019552	HNRNPM	1	0	6
chr15:49009216\|49019552	SF3A3	1	0	1
chr15:49009216\|49019552	PTBP1	25	7	1
chr15:49009216\|49019552	HNRNPC	4	0	7
chr15:49009216\|49019552	TRA2A	0	0	4
chr15:49009216\|49019552	HNRNPA2B1	1	0	0
chr15:49009216\|49019552	ZNF184	0	0	1
chr15:49009216\|49019552	ACIN1	2	0	2
chr15:49009216\|49019552	SMNDC1	1	0	1
chr15:49009216\|49019552	MSI2	0	0	1
chr15:49009216\|49019552	HNRNPA1	4	0	1
chr15:49009216\|49019552	RBM10	1	0	0
chr15:49009216\|49019552	LIN28B	1	1	0
chr15:49009216\|49019552	FXR1	0	0	2
chr15:49009216\|49019552	FXR2	0	0	3
chr15:49009216\|49019552	IGF2BP1	0	0	8
chr15:49009216\|49019552	BUD13	0	0	4
chr15:49009216\|49019552	IGF2BP3	0	0	4
chr15:49009216\|49019552	IGF2BP2	0	0	28
chr15:49009216\|49019552	HNRNPUL1	1	0	0
chr15:49009216\|49019552	TARDBP	0	1	1
chr15:49009216\|49019552	GTF2F1	0	0	2
chr15:49009216\|49019552	RBFOX2	0	0	1
chr15:49009216\|49019552	RBM47	0	0	3
chr15:49009216\|49019552	DHX30	1	0	0
chr15:49009216\|49019552	CSTF2T	0	0	4
chr15:49009216\|49019552	TIA1	2	0	0
chr15:49009216\|49019552	TARBP2	0	0	1
chr15:49009216\|49019552	XRN2	0	0	1
chr15:49009216\|49019552	AGO2	0	0	7
chr15:49009216\|49019552	EIF4A3	1	0	13
chr15:49009216\|49019552	FBL	1	0	6

CircRNA Information