CircRNA Information

General Information
circRNA Basic Information
CircID chr15:51910894|51911067
Strand +
CircType exon
Host Gene ENSG00000138594.11;
Algorism CIRI2;
Sequence TCCCAATCTTGCTGGAACTGTGCAGTCTCTATAAAATCAAGTACAATCAAAAAGCTGCATATGCGGGGAAAAAAAAAGAGAGGAGAAGAGAGGGAGGGAGAGAAATAGGTAAATAGAGAAGGTAGGAAGGGAGAGGGATGGAGGCAAGGGAGGCAAGAAAGCAAGCAAGTGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:51910894|51911067 hsa-miR-578 0 0 1
chr15:51910894|51911067 hsa-miR-623 1 0 1
chr15:51910894|51911067 hsa-miR-1301-5p 0 0 1
chr15:51910894|51911067 hsa-miR-1301-3p 0 0 1
chr15:51910894|51911067 hsa-miR-942-5p 0 0 1
chr15:51910894|51911067 hsa-miR-942-3p 0 0 1
chr15:51910894|51911067 hsa-miR-1236-5p 0 0 1
chr15:51910894|51911067 hsa-miR-1236-3p 0 0 1
chr15:51910894|51911067 hsa-miR-338-3p 0 0 1
chr15:51910894|51911067 hsa-miR-508-3p 0 0 1
chr15:51910894|51911067 hsa-miR-642 0 0 1
chr15:51910894|51911067 hsa-miR-219-5p 0 0 1
chr15:51910894|51911067 hsa-miR-636 1 0 0
chr15:51910894|51911067 hsa-miR-1282 1 0 0
chr15:51910894|51911067 hsa-miR-1470 1 0 0
chr15:51910894|51911067 hsa-miR-1471 1 0 0
chr15:51910894|51911067 hsa-miR-1976 1 0 0
chr15:51910894|51911067 hsa-miR-3183 1 0 0
chr15:51910894|51911067 hsa-miR-4297 1 0 0
chr15:51910894|51911067 hsa-miR-4326 1 0 0
chr15:51910894|51911067 hsa-miR-4290 1 0 0
chr15:51910894|51911067 hsa-miR-3685 1 0 0
chr15:51910894|51911067 hsa-miR-3938 1 0 0
chr15:51910894|51911067 hsa-miR-4469 1 0 0
chr15:51910894|51911067 hsa-miR-4780 1 0 0
chr15:51910894|51911067 hsa-miR-5193 1 0 0
chr15:51910894|51911067 hsa-miR-9898 1 0 0
chr15:51910894|51911067 hsa-miR-12125 1 0 0
chr15:51910894|51911067 hsa-miR-511-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6749-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6747-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6836-3p 1 0 0
chr15:51910894|51911067 hsa-miR-212-5p 1 0 0
chr15:51910894|51911067 hsa-miR-205-5p 1 0 0
chr15:51910894|51911067 hsa-miR-766-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6892-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6873-3p 1 0 0
chr15:51910894|51911067 hsa-miR-7110-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6841-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6817-3p 1 0 0
chr15:51910894|51911067 hsa-miR-1915-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6845-3p 1 0 0
chr15:51910894|51911067 hsa-miR-877-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6868-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4655-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4753-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6728-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6740-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4713-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4793-5p 1 0 0
chr15:51910894|51911067 hsa-miR-1247-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6894-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6803-3p 1 0 0
chr15:51910894|51911067 hsa-miR-5001-3p 1 0 0
chr15:51910894|51911067 hsa-miR-7113-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3679-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3667-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3191-5p 1 0 0
chr15:51910894|51911067 hsa-miR-642b-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6818-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6809-3p 1 0 0
chr15:51910894|51911067 hsa-miR-7111-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6780a-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4667-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4446-5p 1 0 0
chr15:51910894|51911067 hsa-miR-1304-3p 1 0 0
chr15:51910894|51911067 hsa-miR-339-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4646-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6870-3p 1 0 0
chr15:51910894|51911067 hsa-miR-211-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4776-3p 1 0 0
chr15:51910894|51911067 hsa-miR-2115-5p 1 0 0
chr15:51910894|51911067 hsa-miR-1237-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6743-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6828-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6867-3p 1 0 0
chr15:51910894|51911067 hsa-miR-629-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6778-3p 1 0 0
chr15:51910894|51911067 hsa-miR-2276-5p 1 0 0
chr15:51910894|51911067 hsa-miR-3614-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6872-3p 1 0 0
chr15:51910894|51911067 hsa-miR-7151-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4632-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3160-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6865-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6826-3p 1 0 0
chr15:51910894|51911067 hsa-miR-1914-5p 1 0 0
chr15:51910894|51911067 hsa-miR-5088-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6738-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6777-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6794-3p 1 0 0
chr15:51910894|51911067 hsa-miR-502-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6880-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6802-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3124-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6883-3p 1 0 0
chr15:51910894|51911067 hsa-miR-204-5p 1 0 0
chr15:51910894|51911067 hsa-miR-130b-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6748-3p 1 0 0
chr15:51910894|51911067 hsa-miR-7152-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6734-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6515-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6812-3p 1 0 0
chr15:51910894|51911067 hsa-miR-1249-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6729-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6780b-3p 1 0 0
chr15:51910894|51911067 hsa-miR-642a-5p 1 0 0
chr15:51910894|51911067 hsa-miR-2116-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6800-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6888-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6885-3p 1 0 0
chr15:51910894|51911067 hsa-miR-5581-3p 1 0 0
chr15:51910894|51911067 hsa-miR-550b-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3152-5p 1 0 0
chr15:51910894|51911067 hsa-miR-337-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3127-3p 1 0 0
chr15:51910894|51911067 hsa-miR-320a-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4685-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4755-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6754-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6866-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6791-3p 1 0 0
chr15:51910894|51911067 hsa-miR-10398-5p 1 0 0
chr15:51910894|51911067 hsa-miR-2682-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6756-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6801-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6829-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3059-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4723-3p 1 0 0
chr15:51910894|51911067 hsa-miR-483-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6529-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6769b-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6744-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4768-5p 1 0 0
chr15:51910894|51911067 hsa-miR-6781-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4800-3p 1 0 0
chr15:51910894|51911067 hsa-miR-5006-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6827-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4769-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6833-3p 1 0 0
chr15:51910894|51911067 hsa-miR-6843-3p 1 0 0
chr15:51910894|51911067 hsa-miR-5699-3p 1 0 0
chr15:51910894|51911067 hsa-miR-4659b-3p 1 0 0
chr15:51910894|51911067 hsa-miR-664b-3p 1 0 0
chr15:51910894|51911067 hsa-miR-3121-5p 1 0 0
chr15:51910894|51911067 hsa-miR-4699-3p 1 0 0
chr15:51910894|51911067 hsa-miR-202-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:51910894|51911067
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MLELCSLYKIKYNQKAAYAGKKKERRREGGREIGK
Nucleotide Sequence TTGCTGGAACTGTGCAGTCTCTATAAAATCAAGTACAATCAAAAAGCTGCATATGCGGGGAAAAAAAAAGAGAGGAGAAGAGAGGGAGGGAGAGAAATAGGTAAATAG
CircID chr15:51910894|51911067
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MLAFLPPLPPSLSLPTFSIYLFLSLPLFSSLFFSPHMQLFDCT
Nucleotide Sequence TTGCTTGCTTTCTTGCCTCCCTTGCCTCCATCCCTCTCCCTTCCTACCTTCTCTATTTACCTATTTCTCTCCCTCCCTCTCTTCTCCTCTCTTTTTTTTTCCCCGCATATGCAGCTTTTTGATTGTACTTGA
CircID chr15:51910894|51911067
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MLSCLPCLHPSPFLPSLFTYFSPSLSSPLFFFPRICSFLIVLDFIETAQFQQDW
Nucleotide Sequence TTGCTTTCTTGCCTCCCTTGCCTCCATCCCTCTCCCTTCCTACCTTCTCTATTTACCTATTTCTCTCCCTCCCTCTCTTCTCCTCTCTTTTTTTTTCCCCGCATATGCAGCTTTTTGATTGTACTTGATTTTATAGAGACTGCACAGTTCCAGCAAGATTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab