CircRNA Information

General Information
circRNA Basic Information
CircID chr15:59136895|59137057
Strand +
CircType exon
Host Gene ENSG00000157483.7;
Algorism CIRI2;
Sequence AGCACCCTGCTTGCTCACCAGGCCTAGAGAATGGCTGTAGGTGGCCGCTGACAAGTGCCTTTAGTTGAAGAGCACATTTCTTTCATCTCTCTTGTCCATACCTGATAGACACATTCCTCTCTGCCACCTTCCTTCAGGGAGGACCCGCCCTCTGCAGACTGGG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:59136895|59137057 hsa-miR-143-5p 0 0 1
chr15:59136895|59137057 hsa-miR-143-3p 0 0 1
chr15:59136895|59137057 hsa-miR-206 0 0 1
chr15:59136895|59137057 hsa-miR-506-5p 0 0 1
chr15:59136895|59137057 hsa-miR-506-3p 0 0 1
chr15:59136895|59137057 hsa-miR-613 0 0 1
chr15:59136895|59137057 hsa-miR-622 0 1 1
chr15:59136895|59137057 hsa-miR-645 0 0 1
chr15:59136895|59137057 hsa-miR-1205 0 0 1
chr15:59136895|59137057 hsa-miR-1251-5p 0 0 1
chr15:59136895|59137057 hsa-miR-1251-3p 0 0 1
chr15:59136895|59137057 hsa-miR-1252-5p 0 0 1
chr15:59136895|59137057 hsa-miR-1252-3p 0 0 1
chr15:59136895|59137057 hsa-miR-1184 0 0 1
chr15:59136895|59137057 hsa-miR-125a-5p 0 0 1
chr15:59136895|59137057 hsa-miR-125b 0 0 1
chr15:59136895|59137057 hsa-miR-124 0 0 1
chr15:59136895|59137057 hsa-miR-1 0 0 1
chr15:59136895|59137057 hsa-miR-923 0 0 1
chr15:59136895|59137057 hsa-miR-1182 1 0 0
chr15:59136895|59137057 hsa-miR-1268a 1 0 0
chr15:59136895|59137057 hsa-miR-2861 1 0 0
chr15:59136895|59137057 hsa-miR-3138 1 1 0
chr15:59136895|59137057 hsa-miR-3141 1 1 0
chr15:59136895|59137057 hsa-miR-3911 1 0 0
chr15:59136895|59137057 hsa-miR-1268b 1 0 0
chr15:59136895|59137057 hsa-miR-4476 0 1 0
chr15:59136895|59137057 hsa-miR-4488 1 0 0
chr15:59136895|59137057 hsa-miR-4739 1 1 0
chr15:59136895|59137057 hsa-miR-6088 0 1 0
chr15:59136895|59137057 hsa-miR-8078 1 1 0
chr15:59136895|59137057 hsa-miR-8085 1 0 0
chr15:59136895|59137057 hsa-miR-12128 1 0 0
chr15:59136895|59137057 hsa-miR-25-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6799-5p 1 0 0
chr15:59136895|59137057 hsa-miR-3934-5p 1 1 0
chr15:59136895|59137057 hsa-miR-6089 1 0 0
chr15:59136895|59137057 hsa-miR-4695-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6890-5p 1 0 0
chr15:59136895|59137057 hsa-miR-197-5p 1 0 0
chr15:59136895|59137057 hsa-miR-3180-3p 1 0 0
chr15:59136895|59137057 hsa-miR-6760-5p 0 1 0
chr15:59136895|59137057 hsa-miR-345-3p 0 1 0
chr15:59136895|59137057 hsa-miR-4640-5p 1 0 0
chr15:59136895|59137057 hsa-miR-1228-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6500-3p 0 1 0
chr15:59136895|59137057 hsa-miR-3158-5p 0 1 0
chr15:59136895|59137057 hsa-miR-331-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6832-5p 1 0 0
chr15:59136895|59137057 hsa-miR-670-5p 0 1 0
chr15:59136895|59137057 hsa-miR-676-5p 0 1 0
chr15:59136895|59137057 hsa-miR-1207-5p 1 0 0
chr15:59136895|59137057 hsa-miR-4763-3p 1 0 0
chr15:59136895|59137057 hsa-miR-6769b-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6816-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6865-5p 1 1 0
chr15:59136895|59137057 hsa-miR-6754-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6756-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6815-5p 1 1 0
chr15:59136895|59137057 hsa-miR-7107-5p 1 1 0
chr15:59136895|59137057 hsa-miR-1249-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6797-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6808-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6879-5p 1 0 0
chr15:59136895|59137057 hsa-miR-1237-5p 1 0 0
chr15:59136895|59137057 hsa-miR-1909-3p 1 1 0
chr15:59136895|59137057 hsa-miR-328-5p 1 0 0
chr15:59136895|59137057 hsa-miR-4726-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6758-5p 0 1 0
chr15:59136895|59137057 hsa-miR-6856-5p 1 1 0
chr15:59136895|59137057 hsa-miR-3116 1 0 0
chr15:59136895|59137057 hsa-miR-6876-5p 0 1 0
chr15:59136895|59137057 hsa-miR-6724-5p 1 0 0
chr15:59136895|59137057 hsa-miR-6859-5p 0 1 0
chr15:59136895|59137057 hsa-miR-302d-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:59136895|59137057
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MKSTFLSSLLSIPDRHIPLCHLPSGRTRPLQTG
Nucleotide Sequence TTGAAGAGCACATTTCTTTCATCTCTCTTGTCCATACCTGATAGACACATTCCTCTCTGCCACCTTCCTTCAGGGAGGACCCGCCCTCTGCAGACTGGG
CircID chr15:59136895|59137057
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MKEGGREECVYQVWTREMKEMCSSTKGTCQRPPTAIL
Nucleotide Sequence CTGAAGGAAGGTGGCAGAGAGGAATGTGTCTATCAGGTATGGACAAGAGAGATGAAAGAAATGTGCTCTTCAACTAAAGGCACTTGTCAGCGGCCACCTACAGCCATTCTCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab