CircNet

General Information

circRNA Basic Information

CircID	chr15:61884128\|61890400
Strand	-
CircType	exon
Host Gene	ENSG00000129003.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	GATGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAGGCTGATTATGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAAAGCAAGCAGGAAGTTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTTGGGAGGTGAAACCAAAGCAGAAATGGAAGCCATTTAGTCAAAAGCAGATAATCTTATTGGAACAATCCTATCAGAAACATCAAATATCAAGAGACCATGGCTGGATTAAGCTAGATAATAATTTTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr15:61884128\|61890400	hsa-miR-6165	1	1	1
chr15:61884128\|61890400	hsa-miR-6861-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-6799-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-6728-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-4786-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-769-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-4722-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-6842-3p	1	1	1
chr15:61884128\|61890400	hsa-miR-6776-5p	1	1	1
chr15:61884128\|61890400	hsa-miR-7854-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr15:61884128\|61890400
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	MEQADYEITLSLHSLGLSLVNNESKQEVSYIGITSSGVVWEVKPKQKWKPFSQKQIILLEQSYQKHQISRDHGWIKLDNNFE
Nucleotide Sequence	ATGGAACAGGCTGATTATGAAATAACCTTGTCTCTCCACAGTCTTGGGCTTTCACTGGTTAACAATGAAAGCAAGCAGGAAGTTTCCTATATTGGGATAACCAGTTCTGGTGTTGTTTGGGAGGTGAAACCAAAGCAGAAATGGAAGCCATTTAGTCAAAAGCAGATAATCTTATTGGAACAATCCTATCAGAAACATCAAATATCAAGAGACCATGGCTGGATTAAGCTAGATAATAATTTTGAG

CircID	chr15:61884128\|61890400
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	MDVDSFHMMQTSRYTGYHFWMGAREFCFSPMMLPWFPKHCRQKKWNRLIMK*
Nucleotide Sequence	ATGGATGTGGACAGTTTCCATATGATGCAAACATCCAGATACACTGGGTATCATTTCTGGATGGGCGCCAGAGAGTTTTGCTTTTCACCGATGATGTTGCCTTGGTTTCCAAAGCACTGCAGGCAGAAGAAATGGAACAGGCTGATTATGAAATAA

CircID	chr15:61884128\|61890400
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MASISALVSPPKQHQNWLSQYRKLPACFHC*
Nucleotide Sequence	ATGGCTTCCATTTCTGCTTTGGTTTCACCTCCCAAACAACACCAGAACTGGTTATCCCAATATAGGAAACTTCCTGCTTGCTTTCATTGTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr15:61884128\|61890400	ELAVL1	1	2	0
chr15:61884128\|61890400	FAM120A	0	0	1
chr15:61884128\|61890400	PRPF8	0	1	1
chr15:61884128\|61890400	FMR1	0	0	3
chr15:61884128\|61890400	FUS	4	0	0
chr15:61884128\|61890400	SRSF1	0	0	2
chr15:61884128\|61890400	NOP58	0	0	2
chr15:61884128\|61890400	U2AF1	0	0	1
chr15:61884128\|61890400	U2AF2	5	1	1
chr15:61884128\|61890400	SRSF9	0	0	1
chr15:61884128\|61890400	DDX54	0	0	6
chr15:61884128\|61890400	HNRNPC	2	0	0
chr15:61884128\|61890400	TRA2A	0	0	2
chr15:61884128\|61890400	DDX3X	0	0	1
chr15:61884128\|61890400	SMNDC1	1	0	0
chr15:61884128\|61890400	LIN28B	1	0	3
chr15:61884128\|61890400	RANGAP1	1	0	2
chr15:61884128\|61890400	FXR1	0	0	1
chr15:61884128\|61890400	FXR2	1	0	2
chr15:61884128\|61890400	IGF2BP1	0	0	4
chr15:61884128\|61890400	IGF2BP3	0	0	2
chr15:61884128\|61890400	IGF2BP2	1	0	1
chr15:61884128\|61890400	TARDBP	1	0	0
chr15:61884128\|61890400	BUD13	0	0	1
chr15:61884128\|61890400	CSTF2T	0	0	3
chr15:61884128\|61890400	XRN2	0	0	2
chr15:61884128\|61890400	AGO2	0	0	1
chr15:61884128\|61890400	EIF4A3	3	0	5
chr15:61884128\|61890400	FBL	1	0	2

CircRNA Information