CircRNA Information

General Information
circRNA Basic Information
CircID chr15:63060902|63061242
Strand -
CircType exon
Host Gene ENSG00000140416.18;
Algorism CIRI2;
Sequence CTGGAACGTGCAGAGGAGCGGGCTGAGCTCTCAGAAGGGTAAGCGGGCCCGGCGCCAGGAGGCCACGAATGGGGTGCTGCAGAGCAGTGACTAAACAGCATGACCTTCTGGCAGCTGCACATTACCTGTTTCAGCTCCGGGCTCCTTTTGTGCTCATTTGATGTGGATGAGCCACGAGTATGGAACATGGAGGACTCGTGTGGGGTGTCTTATGTATGAATGCGTGTATCACTGCATGCCTTACCTGCACACTGATTTTGTGAATGGCCTTGTGCATTTCCTGTGTCCACTAACAGCCAAGTCCGACAGCTGGAAGAACAATTAAGAATAATGGATCAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:63060902|63061242 hsa-miR-22-5p 0 0 1
chr15:63060902|63061242 hsa-miR-22-3p 0 0 1
chr15:63060902|63061242 hsa-miR-107 0 0 1
chr15:63060902|63061242 hsa-miR-493-5p 0 0 1
chr15:63060902|63061242 hsa-miR-493-3p 0 0 1
chr15:63060902|63061242 hsa-miR-494-5p 0 0 1
chr15:63060902|63061242 hsa-miR-494-3p 0 0 1
chr15:63060902|63061242 hsa-miR-506-5p 0 0 1
chr15:63060902|63061242 hsa-miR-506-3p 0 0 1
chr15:63060902|63061242 hsa-miR-587 0 0 1
chr15:63060902|63061242 hsa-miR-640 0 0 1
chr15:63060902|63061242 hsa-miR-641 0 0 1
chr15:63060902|63061242 hsa-miR-647 0 0 1
chr15:63060902|63061242 hsa-miR-648 0 1 1
chr15:63060902|63061242 hsa-miR-657 0 0 1
chr15:63060902|63061242 hsa-miR-1301-5p 0 0 1
chr15:63060902|63061242 hsa-miR-1301-3p 0 0 1
chr15:63060902|63061242 hsa-miR-1237-5p 0 0 1
chr15:63060902|63061242 hsa-miR-1237-3p 0 0 1
chr15:63060902|63061242 hsa-miR-1203 1 0 1
chr15:63060902|63061242 hsa-miR-1204 0 0 1
chr15:63060902|63061242 hsa-miR-1205 0 0 1
chr15:63060902|63061242 hsa-miR-513b-5p 0 0 1
chr15:63060902|63061242 hsa-miR-513b-3p 0 0 1
chr15:63060902|63061242 hsa-miR-1184 0 1 1
chr15:63060902|63061242 hsa-miR-566 0 0 1
chr15:63060902|63061242 hsa-miR-885-5p 0 0 1
chr15:63060902|63061242 hsa-miR-485-3p 0 0 1
chr15:63060902|63061242 hsa-miR-105 0 0 1
chr15:63060902|63061242 hsa-miR-103 0 0 1
chr15:63060902|63061242 hsa-miR-124 0 0 1
chr15:63060902|63061242 hsa-miR-24 0 0 1
chr15:63060902|63061242 hsa-miR-3138 0 1 0
chr15:63060902|63061242 hsa-miR-3195 0 1 0
chr15:63060902|63061242 hsa-miR-3974 0 1 0
chr15:63060902|63061242 hsa-miR-4751 1 0 0
chr15:63060902|63061242 hsa-miR-5047 0 1 0
chr15:63060902|63061242 hsa-miR-5093 0 1 0
chr15:63060902|63061242 hsa-miR-5691 0 1 0
chr15:63060902|63061242 hsa-miR-8063 0 1 0
chr15:63060902|63061242 hsa-miR-9899 1 0 0
chr15:63060902|63061242 hsa-miR-12124 0 1 0
chr15:63060902|63061242 hsa-miR-4687-3p 1 1 0
chr15:63060902|63061242 hsa-miR-6089 1 0 0
chr15:63060902|63061242 hsa-miR-4722-5p 1 0 0
chr15:63060902|63061242 hsa-miR-3064-5p 1 0 0
chr15:63060902|63061242 hsa-miR-6768-5p 1 1 0
chr15:63060902|63061242 hsa-miR-6874-5p 0 1 0
chr15:63060902|63061242 hsa-miR-6728-3p 1 0 0
chr15:63060902|63061242 hsa-miR-3160-3p 0 1 0
chr15:63060902|63061242 hsa-miR-6895-5p 0 1 0
chr15:63060902|63061242 hsa-miR-6870-3p 0 1 0
chr15:63060902|63061242 hsa-miR-7846-3p 1 0 0
chr15:63060902|63061242 hsa-miR-660-3p 0 1 0
chr15:63060902|63061242 hsa-miR-6871-3p 0 1 0
chr15:63060902|63061242 hsa-miR-6761-5p 0 1 0
chr15:63060902|63061242 hsa-miR-3670 0 1 0
chr15:63060902|63061242 hsa-miR-5189-5p 1 0 0
chr15:63060902|63061242 hsa-miR-4665-5p 1 0 0
chr15:63060902|63061242 hsa-miR-6791-3p 0 1 0
chr15:63060902|63061242 hsa-miR-6849-5p 1 1 0
chr15:63060902|63061242 hsa-miR-6792-3p 0 1 0
chr15:63060902|63061242 hsa-miR-6805-3p 1 1 0
chr15:63060902|63061242 hsa-miR-10392-3p 1 0 0
chr15:63060902|63061242 hsa-miR-4691-5p 0 1 0
chr15:63060902|63061242 hsa-miR-6848-3p 0 1 0
chr15:63060902|63061242 hsa-miR-549a-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:63060902|63061242
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MTFWQLHITCFSSGLLLCSFDVDEPRVWNMEDSCGVSYV
Nucleotide Sequence ATGACCTTCTGGCAGCTGCACATTACCTGTTTCAGCTCCGGGCTCCTTTTGTGCTCATTTGATGTGGATGAGCCACGAGTATGGAACATGGAGGACTCGTGTGGGGTGTCTTATGTATGA
CircID chr15:63060902|63061242
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MMWMSHEYGTWRTRVGCLMYECVYHCMPYLHTDFVNGLVHFLCPLTAKSDSWKNN
Nucleotide Sequence TTGATGTGGATGAGCCACGAGTATGGAACATGGAGGACTCGTGTGGGGTGTCTTATGTATGAATGCGTGTATCACTGCATGCCTTACCTGCACACTGATTTTGTGAATGGCCTTGTGCATTTCCTGTGTCCACTAACAGCCAAGTCCGACAGCTGGAAGAACAATTAA
CircID chr15:63060902|63061242
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MGCCRAVTKQHDLLAAAHYLFQLRAPFVLI
Nucleotide Sequence ATGGGGTGCTGCAGAGCAGTGACTAAACAGCATGACCTTCTGGCAGCTGCACATTACCTGTTTCAGCTCCGGGCTCCTTTTGTGCTCATTTGA
CircID chr15:63060902|63061242
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MEHGGLVWGVLCMNACITACLTCTLIL
Nucleotide Sequence ATGGAACATGGAGGACTCGTGTGGGGTGTCTTATGTATGAATGCGTGTATCACTGCATGCCTTACCTGCACACTGATTTTGTGA
CircID chr15:63060902|63061242
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MLVDTGNAQGHSQNQCAGKACSDTRIHT
Nucleotide Sequence CTGTTAGTGGACACAGGAAATGCACAAGGCCATTCACAAAATCAGTGTGCAGGTAAGGCATGCAGTGATACACGCATTCATACATAA
CircID chr15:63060902|63061242
ORF Type ORF6
Protein Length 62
Nucleotide Length 186
Protein Sequence MFHTRGSSTSNEHKRSPELKQVMCSCQKVMLFSHCSAAPHSWPPGAGPAYPSESSARSSARS
Nucleotide Sequence ATGTTCCATACTCGTGGCTCATCCACATCAAATGAGCACAAAAGGAGCCCGGAGCTGAAACAGGTAATGTGCAGCTGCCAGAAGGTCATGCTGTTTAGTCACTGCTCTGCAGCACCCCATTCGTGGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTGAGAGCTCAGCCCGCTCCTCTGCACGTTCC
CircID chr15:63060902|63061242
ORF Type ORF7
Protein Length 48
Nucleotide Length 147
Protein Sequence MHKAIHKISVQVRHAVIHAFIHKTPHTSPPCSILVAHPHQMSTKGARS
Nucleotide Sequence ATGCACAAGGCCATTCACAAAATCAGTGTGCAGGTAAGGCATGCAGTGATACACGCATTCATACATAAGACACCCCACACGAGTCCTCCATGTTCCATACTCGTGGCTCATCCACATCAAATGAGCACAAAAGGAGCCCGGAGCTGA
CircID chr15:63060902|63061242
ORF Type ORF8
Protein Length 27
Nucleotide Length 81
Protein Sequence MQHPIRGLLAPGPLTLLRAQPAPLHVP
Nucleotide Sequence CTGCAGCACCCCATTCGTGGCCTCCTGGCGCCGGGCCCGCTTACCCTTCTGAGAGCTCAGCCCGCTCCTCTGCACGTTCCA
CircID chr15:63060902|63061242
ORF Type ORF9
Protein Length 26
Nucleotide Length 81
Protein Sequence MFFQLSDLAVSGHRKCTRPFTKSVCR
Nucleotide Sequence TTGTTCTTCCAGCTGTCGGACTTGGCTGTTAGTGGACACAGGAAATGCACAAGGCCATTCACAAAATCAGTGTGCAGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab