CircRNA Information

General Information
circRNA Basic Information
CircID chr15:63345477|63345554
Strand -
CircType exon
Host Gene ENSG00000074410.12;
Algorism CIRI2;
Sequence CTCGGCGGCGAAGTGCTGTCCGCTGACGGTGTGCTCAGAGCCGTGCGGGTCATTCGGGTTCCCCCAGTGCAGGTGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:63345477|63345554 hsa-miR-625-5p 0 0 1
chr15:63345477|63345554 hsa-miR-625-3p 0 0 1
chr15:63345477|63345554 hsa-miR-637 1 1 1
chr15:63345477|63345554 hsa-miR-760 0 0 1
chr15:63345477|63345554 hsa-miR-1275 0 0 1
chr15:63345477|63345554 hsa-miR-220a 0 0 1
chr15:63345477|63345554 hsa-miR-923 0 0 1
chr15:63345477|63345554 hsa-miR-1539 1 0 0
chr15:63345477|63345554 hsa-miR-3921 0 1 0
chr15:63345477|63345554 hsa-miR-8055 0 1 0
chr15:63345477|63345554 hsa-miR-1301-3p 1 0 0
chr15:63345477|63345554 hsa-miR-3130-3p 0 1 0
chr15:63345477|63345554 hsa-miR-6765-3p 1 0 0
chr15:63345477|63345554 hsa-miR-6804-3p 1 0 0
chr15:63345477|63345554 hsa-miR-6720-3p 1 0 0
chr15:63345477|63345554 hsa-miR-3177-3p 1 1 0
chr15:63345477|63345554 hsa-miR-500a-3p 1 1 0
chr15:63345477|63345554 hsa-miR-5189-5p 1 1 0
chr15:63345477|63345554 hsa-miR-4665-5p 0 1 0
chr15:63345477|63345554 hsa-miR-6807-3p 1 0 0
chr15:63345477|63345554 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:63345477|63345554
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence LHLHWGNPNDPHGSEHTVSGQHFAAE
Nucleotide Sequence CTGCACCTGCACTGGGGGAACCCGAATGACCCGCACGGCTCTGAGCACACCGTCAGCGGACAGCACTTCGCCGCCGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab