CircRNA Information

General Information
circRNA Basic Information
CircID chr15:64499588|64499779
Strand +
CircType exon
Host Gene ENSG00000180357.8;
Algorism CIRI2;
Sequence CTCTTTCTTGCTAGCTGCCCCCTCACTTGGAGTGAACAGGGAAGTCCCTGGAGTGGGTTTGCTAGTGTCTTTGCCACTCTTACTCCTTTTGGATTTTGATTTGCCTTCCTTCCCTTGAGGACCTGGCACTGGGGTCACAAACTTGATGTTGTCTGGTAGTGTGGCCACAGCATTGGGAGCCGGTATCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:64499588|64499779 hsa-miR-150-5p 0 0 1
chr15:64499588|64499779 hsa-miR-150-3p 0 0 1
chr15:64499588|64499779 hsa-miR-588 0 1 1
chr15:64499588|64499779 hsa-miR-617 0 0 1
chr15:64499588|64499779 hsa-miR-621 0 0 1
chr15:64499588|64499779 hsa-miR-758-5p 0 0 1
chr15:64499588|64499779 hsa-miR-758-3p 0 0 1
chr15:64499588|64499779 hsa-miR-663b 0 0 1
chr15:64499588|64499779 hsa-miR-548p 0 0 1
chr15:64499588|64499779 hsa-miR-1252-5p 0 0 1
chr15:64499588|64499779 hsa-miR-1252-3p 0 0 1
chr15:64499588|64499779 hsa-miR-1825 0 1 1
chr15:64499588|64499779 hsa-miR-491-5p 0 1 1
chr15:64499588|64499779 hsa-miR-486-3p 0 1 1
chr15:64499588|64499779 hsa-miR-339-5p 0 0 1
chr15:64499588|64499779 hsa-miR-423-5p 1 0 1
chr15:64499588|64499779 hsa-miR-508-5p 0 1 1
chr15:64499588|64499779 hsa-miR-483-3p 0 0 1
chr15:64499588|64499779 hsa-miR-1274a 0 0 1
chr15:64499588|64499779 hsa-miR-1274b 0 0 1
chr15:64499588|64499779 hsa-miR-650 1 0 0
chr15:64499588|64499779 hsa-miR-663a 1 0 0
chr15:64499588|64499779 hsa-miR-3196 1 0 0
chr15:64499588|64499779 hsa-miR-4488 1 0 0
chr15:64499588|64499779 hsa-miR-4489 1 0 0
chr15:64499588|64499779 hsa-miR-4688 1 0 0
chr15:64499588|64499779 hsa-miR-4710 1 0 0
chr15:64499588|64499779 hsa-miR-4739 1 0 0
chr15:64499588|64499779 hsa-miR-5090 1 0 0
chr15:64499588|64499779 hsa-miR-7704 1 0 0
chr15:64499588|64499779 hsa-miR-8063 0 1 0
chr15:64499588|64499779 hsa-miR-9900 0 1 0
chr15:64499588|64499779 hsa-miR-4433a-3p 0 1 0
chr15:64499588|64499779 hsa-miR-6765-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6757-5p 1 0 0
chr15:64499588|64499779 hsa-miR-4695-5p 1 0 0
chr15:64499588|64499779 hsa-miR-4755-3p 1 1 0
chr15:64499588|64499779 hsa-miR-6890-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6732-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6805-5p 1 1 0
chr15:64499588|64499779 hsa-miR-6835-5p 1 0 0
chr15:64499588|64499779 hsa-miR-1226-5p 1 0 0
chr15:64499588|64499779 hsa-miR-1266-3p 0 1 0
chr15:64499588|64499779 hsa-miR-3688-5p 0 1 0
chr15:64499588|64499779 hsa-miR-6808-3p 0 1 0
chr15:64499588|64499779 hsa-miR-10400-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6778-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6865-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6780a-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6797-5p 1 0 0
chr15:64499588|64499779 hsa-miR-4728-5p 1 1 0
chr15:64499588|64499779 hsa-miR-1237-5p 1 0 0
chr15:64499588|64499779 hsa-miR-328-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6738-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6846-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6858-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6887-5p 1 0 0
chr15:64499588|64499779 hsa-miR-4697-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6845-5p 1 0 0
chr15:64499588|64499779 hsa-miR-6885-5p 1 1 0
chr15:64499588|64499779 hsa-miR-4758-5p 1 0 0
chr15:64499588|64499779 hsa-miR-365a-5p 1 0 0
chr15:64499588|64499779 hsa-miR-365b-5p 1 1 0
chr15:64499588|64499779 hsa-miR-3085-5p 0 1 0
chr15:64499588|64499779 hsa-miR-1914-3p 1 0 0
chr15:64499588|64499779 hsa-miR-4747-5p 1 1 0
chr15:64499588|64499779 hsa-miR-3059-3p 1 0 0
chr15:64499588|64499779 hsa-miR-514b-5p 1 1 0
chr15:64499588|64499779 hsa-miR-7973 0 1 0
chr15:64499588|64499779 hsa-miR-4999-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:64499588|64499779
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MLAAPSLGVNREVPGVGLLVSLPLLLLLDFDLPSFP
Nucleotide Sequence TTGCTAGCTGCCCCCTCACTTGGAGTGAACAGGGAAGTCCCTGGAGTGGGTTTGCTAGTGTCTTTGCCACTCTTACTCCTTTTGGATTTTGATTTGCCTTCCTTCCCTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab