CircRNA Information

General Information
circRNA Basic Information
CircID chr15:64685444|64685654
Strand -
CircType exon
Host Gene ENSG00000180357.8;
Algorism CIRI2;
Sequence CTGCCTTGTAACCCTTTTCTGCCCAGCATTGTTTTCTGGCTTGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTTCACCTTTAGATTTCCATTCACCGAAGTGGCTTTGGACCCCTGGGTACTCTGGGACCTGTTTCCTGGAGGCCCTGGCTTGGGACACTCACCTGTGAAACTATGCAGCTGGGAGCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:64685444|64685654 hsa-miR-27a-5p 0 0 1
chr15:64685444|64685654 hsa-miR-27a-3p 0 0 1
chr15:64685444|64685654 hsa-miR-27b-5p 0 0 1
chr15:64685444|64685654 hsa-miR-27b-3p 0 0 1
chr15:64685444|64685654 hsa-miR-320a-5p 0 0 1
chr15:64685444|64685654 hsa-miR-320a-3p 0 0 1
chr15:64685444|64685654 hsa-miR-552-5p 0 0 1
chr15:64685444|64685654 hsa-miR-552-3p 0 0 1
chr15:64685444|64685654 hsa-miR-570-5p 0 0 1
chr15:64685444|64685654 hsa-miR-570-3p 0 0 1
chr15:64685444|64685654 hsa-miR-575 0 1 1
chr15:64685444|64685654 hsa-miR-612 0 1 1
chr15:64685444|64685654 hsa-miR-624-5p 0 0 1
chr15:64685444|64685654 hsa-miR-624-3p 0 0 1
chr15:64685444|64685654 hsa-miR-665 0 0 1
chr15:64685444|64685654 hsa-miR-1257 0 0 1
chr15:64685444|64685654 hsa-miR-548m 0 0 1
chr15:64685444|64685654 hsa-miR-125a-3p 0 1 1
chr15:64685444|64685654 hsa-miR-615-5p 1 0 1
chr15:64685444|64685654 hsa-miR-574-5p 0 0 1
chr15:64685444|64685654 hsa-miR-513a-5p 0 1 1
chr15:64685444|64685654 hsa-miR-320b 1 0 1
chr15:64685444|64685654 hsa-miR-320c 1 0 1
chr15:64685444|64685654 hsa-miR-320d 1 0 1
chr15:64685444|64685654 hsa-miR-220c 0 0 1
chr15:64685444|64685654 hsa-miR-153 0 0 1
chr15:64685444|64685654 hsa-miR-1285 0 0 1
chr15:64685444|64685654 hsa-miR-762 1 0 0
chr15:64685444|64685654 hsa-miR-1202 1 0 0
chr15:64685444|64685654 hsa-miR-3132 1 0 0
chr15:64685444|64685654 hsa-miR-3147 1 1 0
chr15:64685444|64685654 hsa-miR-3154 1 0 0
chr15:64685444|64685654 hsa-miR-320e 1 0 0
chr15:64685444|64685654 hsa-miR-3196 1 0 0
chr15:64685444|64685654 hsa-miR-4261 0 1 0
chr15:64685444|64685654 hsa-miR-4281 1 0 0
chr15:64685444|64685654 hsa-miR-378g 0 1 0
chr15:64685444|64685654 hsa-miR-4429 1 0 0
chr15:64685444|64685654 hsa-miR-4488 1 0 0
chr15:64685444|64685654 hsa-miR-4496 0 1 0
chr15:64685444|64685654 hsa-miR-4505 1 0 0
chr15:64685444|64685654 hsa-miR-4516 1 0 0
chr15:64685444|64685654 hsa-miR-4689 1 0 0
chr15:64685444|64685654 hsa-miR-4706 1 0 0
chr15:64685444|64685654 hsa-miR-4739 1 0 0
chr15:64685444|64685654 hsa-miR-5090 1 0 0
chr15:64685444|64685654 hsa-miR-5093 1 0 0
chr15:64685444|64685654 hsa-miR-5192 1 0 0
chr15:64685444|64685654 hsa-miR-5194 1 0 0
chr15:64685444|64685654 hsa-miR-5739 1 0 0
chr15:64685444|64685654 hsa-miR-6088 1 0 0
chr15:64685444|64685654 hsa-miR-6131 1 0 0
chr15:64685444|64685654 hsa-miR-6133 1 0 0
chr15:64685444|64685654 hsa-miR-6860 1 1 0
chr15:64685444|64685654 hsa-miR-8085 1 0 0
chr15:64685444|64685654 hsa-miR-9900 0 1 0
chr15:64685444|64685654 hsa-miR-134-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4433b-3p 1 0 0
chr15:64685444|64685654 hsa-miR-153-3p 0 1 0
chr15:64685444|64685654 hsa-miR-6734-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6861-5p 1 0 0
chr15:64685444|64685654 hsa-miR-7106-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6825-5p 1 1 0
chr15:64685444|64685654 hsa-miR-6894-5p 1 0 0
chr15:64685444|64685654 hsa-miR-1972 1 1 0
chr15:64685444|64685654 hsa-miR-29b-2-5p 0 1 0
chr15:64685444|64685654 hsa-miR-6799-5p 1 0 0
chr15:64685444|64685654 hsa-miR-1227-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6089 1 0 0
chr15:64685444|64685654 hsa-miR-6757-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6880-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4709-3p 1 0 0
chr15:64685444|64685654 hsa-miR-3677-5p 0 1 0
chr15:64685444|64685654 hsa-miR-6730-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6762-3p 1 0 0
chr15:64685444|64685654 hsa-miR-6721-5p 1 0 0
chr15:64685444|64685654 hsa-miR-197-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6787-3p 1 0 0
chr15:64685444|64685654 hsa-miR-6716-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6732-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6782-5p 1 0 0
chr15:64685444|64685654 hsa-miR-5008-5p 1 0 0
chr15:64685444|64685654 hsa-miR-5006-5p 1 0 0
chr15:64685444|64685654 hsa-miR-615-3p 0 1 0
chr15:64685444|64685654 hsa-miR-7109-5p 1 0 0
chr15:64685444|64685654 hsa-miR-185-5p 1 0 0
chr15:64685444|64685654 hsa-miR-204-3p 1 0 0
chr15:64685444|64685654 hsa-miR-1229-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4640-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6753-5p 1 1 0
chr15:64685444|64685654 hsa-miR-1228-5p 1 0 0
chr15:64685444|64685654 hsa-miR-92b-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4446-3p 1 0 0
chr15:64685444|64685654 hsa-miR-149-3p 1 0 0
chr15:64685444|64685654 hsa-miR-6824-5p 1 1 0
chr15:64685444|64685654 hsa-miR-941 1 0 0
chr15:64685444|64685654 hsa-miR-6781-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6877-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6895-5p 1 1 0
chr15:64685444|64685654 hsa-miR-664b-5p 0 1 0
chr15:64685444|64685654 hsa-miR-6832-5p 1 0 0
chr15:64685444|64685654 hsa-miR-483-5p 1 0 0
chr15:64685444|64685654 hsa-miR-3670 1 0 0
chr15:64685444|64685654 hsa-miR-6841-5p 0 1 0
chr15:64685444|64685654 hsa-miR-1233-5p 1 1 0
chr15:64685444|64685654 hsa-miR-4763-3p 1 0 0
chr15:64685444|64685654 hsa-miR-6778-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6787-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6870-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6775-5p 1 0 0
chr15:64685444|64685654 hsa-miR-1343-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6756-5p 1 0 0
chr15:64685444|64685654 hsa-miR-1249-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6774-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6779-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6797-5p 1 0 0
chr15:64685444|64685654 hsa-miR-7111-5p 1 0 0
chr15:64685444|64685654 hsa-miR-3620-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4728-5p 1 0 0
chr15:64685444|64685654 hsa-miR-5189-5p 1 1 0
chr15:64685444|64685654 hsa-miR-5196-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6780b-5p 1 0 0
chr15:64685444|64685654 hsa-miR-10396b-5p 1 0 0
chr15:64685444|64685654 hsa-miR-328-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4649-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4685-5p 1 1 0
chr15:64685444|64685654 hsa-miR-4726-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4745-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6729-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6735-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6738-5p 1 0 0
chr15:64685444|64685654 hsa-miR-675-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6795-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6858-5p 1 1 0
chr15:64685444|64685654 hsa-miR-6883-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6889-5p 0 1 0
chr15:64685444|64685654 hsa-miR-3187-5p 1 1 0
chr15:64685444|64685654 hsa-miR-4723-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6831-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6845-5p 1 1 0
chr15:64685444|64685654 hsa-miR-6885-5p 1 1 0
chr15:64685444|64685654 hsa-miR-939-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4758-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6511a-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6758-5p 1 1 0
chr15:64685444|64685654 hsa-miR-6856-5p 1 0 0
chr15:64685444|64685654 hsa-miR-1285-3p 0 1 0
chr15:64685444|64685654 hsa-miR-1914-3p 1 0 0
chr15:64685444|64685654 hsa-miR-6891-5p 1 0 0
chr15:64685444|64685654 hsa-miR-4716-3p 1 0 0
chr15:64685444|64685654 hsa-miR-3184-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6849-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6762-5p 1 0 0
chr15:64685444|64685654 hsa-miR-6837-5p 0 1 0
chr15:64685444|64685654 hsa-miR-6783-3p 0 1 0
chr15:64685444|64685654 hsa-miR-4676-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:64685444|64685654
ORF Type ORF1
Protein Length 70
Nucleotide Length 210
Protein Sequence LPCNPFLPSIVFWLGHWLSPGALLCALASPLFTFRFPFTEVALDPWVLWDLFPGGPGLGHSPVKLCSWEL
Nucleotide Sequence CTGCCTTGTAACCCTTTTCTGCCCAGCATTGTTTTCTGGCTTGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTTCACCTTTAGATTTCCATTCACCGAAGTGGCTTTGGACCCCTGGGTACTCTGGGACCTGTTTCCTGGAGGCCCTGGCTTGGGACACTCACCTGTGAAACTATGCAGCTGGGAGCTC
CircID chr15:64685444|64685654
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MFSGLATGLAQELYSVPWPPLSSPLDFHSPKWLWTPGYSGTCFLEALAWDTHL
Nucleotide Sequence TTGTTTTCTGGCTTGGCCACTGGCTTAGCCCAGGAGCTTTACTCTGTGCCCTGGCCTCCCCTCTCTTCACCTTTAGATTTCCATTCACCGAAGTGGCTTTGGACCCCTGGGTACTCTGGGACCTGTTTCCTGGAGGCCCTGGCTTGGGACACTCACCTGTGA
CircID chr15:64685444|64685654
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGTLGPVSWRPWLGTLTCETMQLGA
Nucleotide Sequence CTGGGTACTCTGGGACCTGTTTCCTGGAGGCCCTGGCTTGGGACACTCACCTGTGAAACTATGCAGCTGGGAGCT
CircID chr15:64685444|64685654
ORF Type ORF4
Protein Length 66
Nucleotide Length 198
Protein Sequence MHSFTGECPKPGPPGNRSQSTQGSKATSVNGNLKVKRGEARAQSKAPGLSQWPSQKTMLGRKGLQG
Nucleotide Sequence CTGCATAGTTTCACAGGTGAGTGTCCCAAGCCAGGGCCTCCAGGAAACAGGTCCCAGAGTACCCAGGGGTCCAAAGCCACTTCGGTGAATGGAAATCTAAAGGTGAAGAGAGGGGAGGCCAGGGCACAGAGTAAAGCTCCTGGGCTAAGCCAGTGGCCAAGCCAGAAAACAATGCTGGGCAGAAAAGGGTTACAAGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab