CircRNA Information

General Information
circRNA Basic Information
CircID chr15:64687727|64687887
Strand -
CircType exon
Host Gene ENSG00000180304.13;
Algorism CIRI2;
Sequence TCCCAGCGCTACCCTAGGCCCTGCAGAGCAGAGTCTCAGACACTACTCGGAACCTGGTGGGGAGGCAGCTAGTACTATACTCAGCCAGCCAGAAGTATCCAGTCCCTAAGAACGGATTGCCCCACAATTCCCAGGCCCTGAGTTGCTATATATTCCTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:64687727|64687887 hsa-miR-22-5p 0 0 1
chr15:64687727|64687887 hsa-miR-22-3p 0 0 1
chr15:64687727|64687887 hsa-miR-149-5p 0 0 1
chr15:64687727|64687887 hsa-miR-149-3p 0 0 1
chr15:64687727|64687887 hsa-miR-496 0 0 1
chr15:64687727|64687887 hsa-miR-510-5p 0 0 1
chr15:64687727|64687887 hsa-miR-510-3p 0 0 1
chr15:64687727|64687887 hsa-miR-661 0 0 1
chr15:64687727|64687887 hsa-miR-1205 0 1 1
chr15:64687727|64687887 hsa-miR-1243 0 0 1
chr15:64687727|64687887 hsa-miR-1266-5p 0 0 1
chr15:64687727|64687887 hsa-miR-1266-3p 0 0 1
chr15:64687727|64687887 hsa-miR-1278 0 0 1
chr15:64687727|64687887 hsa-miR-491-5p 0 0 1
chr15:64687727|64687887 hsa-miR-486-3p 0 0 1
chr15:64687727|64687887 hsa-miR-1184 0 0 1
chr15:64687727|64687887 hsa-miR-767-3p 0 0 1
chr15:64687727|64687887 hsa-miR-142-3p 0 0 1
chr15:64687727|64687887 hsa-miR-219-2-3p 0 0 1
chr15:64687727|64687887 hsa-miR-762 1 0 0
chr15:64687727|64687887 hsa-miR-760 1 0 0
chr15:64687727|64687887 hsa-miR-1182 0 1 0
chr15:64687727|64687887 hsa-miR-2861 0 1 0
chr15:64687727|64687887 hsa-miR-4329 0 1 0
chr15:64687727|64687887 hsa-miR-3916 0 1 0
chr15:64687727|64687887 hsa-miR-3918 0 1 0
chr15:64687727|64687887 hsa-miR-4512 0 1 0
chr15:64687727|64687887 hsa-miR-4515 0 1 0
chr15:64687727|64687887 hsa-miR-4518 0 1 0
chr15:64687727|64687887 hsa-miR-4522 1 1 0
chr15:64687727|64687887 hsa-miR-5691 0 1 0
chr15:64687727|64687887 hsa-miR-6132 1 1 0
chr15:64687727|64687887 hsa-miR-8077 0 1 0
chr15:64687727|64687887 hsa-miR-12119 1 0 0
chr15:64687727|64687887 hsa-miR-6836-3p 0 1 0
chr15:64687727|64687887 hsa-miR-6854-5p 0 1 0
chr15:64687727|64687887 hsa-miR-3064-5p 0 1 0
chr15:64687727|64687887 hsa-miR-3663-5p 1 0 0
chr15:64687727|64687887 hsa-miR-3151-5p 0 1 0
chr15:64687727|64687887 hsa-miR-6796-5p 1 0 0
chr15:64687727|64687887 hsa-miR-6728-3p 0 1 0
chr15:64687727|64687887 hsa-miR-6882-3p 0 1 0
chr15:64687727|64687887 hsa-miR-3944-3p 1 0 0
chr15:64687727|64687887 hsa-miR-3127-5p 1 1 0
chr15:64687727|64687887 hsa-miR-6749-5p 1 1 0
chr15:64687727|64687887 hsa-miR-4733-3p 0 1 0
chr15:64687727|64687887 hsa-miR-6778-3p 0 1 0
chr15:64687727|64687887 hsa-miR-744-5p 1 0 0
chr15:64687727|64687887 hsa-miR-219a-2-3p 0 1 0
chr15:64687727|64687887 hsa-miR-6775-5p 1 0 0
chr15:64687727|64687887 hsa-miR-6813-5p 0 1 0
chr15:64687727|64687887 hsa-miR-6722-3p 1 0 0
chr15:64687727|64687887 hsa-miR-6836-5p 1 1 0
chr15:64687727|64687887 hsa-miR-10396a-5p 1 0 0
chr15:64687727|64687887 hsa-miR-4685-5p 0 1 0
chr15:64687727|64687887 hsa-miR-5008-3p 1 0 0
chr15:64687727|64687887 hsa-miR-6859-5p 0 1 0
chr15:64687727|64687887 hsa-miR-10394-5p 0 1 0
chr15:64687727|64687887 hsa-miR-6504-5p 0 1 0
chr15:64687727|64687887 hsa-miR-6864-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr15:64687727|64687887
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MQSRVSDTTRNLVGRQLVLYSASQKYPVPKNGLPHNSQALSCYIFLF
Nucleotide Sequence CTGCAGAGCAGAGTCTCAGACACTACTCGGAACCTGGTGGGGAGGCAGCTAGTACTATACTCAGCCAGCCAGAAGTATCCAGTCCCTAAGAACGGATTGCCCCACAATTCCCAGGCCCTGAGTTGCTATATATTCCTCTTC

CircID chr15:64687727|64687887
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MWGNPFLGTGYFWLAEYSTSCLPTRFRVVSETLLCRA
Nucleotide Sequence TTGTGGGGCAATCCGTTCTTAGGGACTGGATACTTCTGGCTGGCTGAGTATAGTACTAGCTGCCTCCCCACCAGGTTCCGAGTAGTGTCTGAGACTCTGCTCTGCAGGGCCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites