CircRNA Information

General Information
circRNA Basic Information
CircID chr15:64963446|64963628
Strand -
CircType exon
Host Gene ENSG00000090487.9;
Algorism CIRI2;
Sequence AGGCTTAGTGGAGATGCCGCCTGTCATGAAGATGACCATCAGTCCTACTTCCCAGACACAGTGAGAACCGGTGAGCCTGACGAACCTGAAGGAAAAGGCTGGCTGACGGGTGCTGATGCCACTGACTATACAAGAACACACCGGGTCAACTCATCATTGACAGCGAGAGACACACTACTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:64963446|64963628 hsa-miR-205-5p 0 0 1
chr15:64963446|64963628 hsa-miR-205-3p 0 0 1
chr15:64963446|64963628 hsa-miR-433-5p 0 0 1
chr15:64963446|64963628 hsa-miR-433-3p 0 0 1
chr15:64963446|64963628 hsa-miR-484 0 0 1
chr15:64963446|64963628 hsa-miR-568 0 0 1
chr15:64963446|64963628 hsa-miR-571 0 0 1
chr15:64963446|64963628 hsa-miR-578 0 0 1
chr15:64963446|64963628 hsa-miR-593-5p 0 0 1
chr15:64963446|64963628 hsa-miR-593-3p 0 0 1
chr15:64963446|64963628 hsa-miR-643 0 0 1
chr15:64963446|64963628 hsa-miR-648 0 0 1
chr15:64963446|64963628 hsa-miR-892a 0 0 1
chr15:64963446|64963628 hsa-miR-1229-5p 0 0 1
chr15:64963446|64963628 hsa-miR-1229-3p 0 0 1
chr15:64963446|64963628 hsa-miR-1231 0 0 1
chr15:64963446|64963628 hsa-miR-1208 1 0 1
chr15:64963446|64963628 hsa-miR-1272 0 0 1
chr15:64963446|64963628 hsa-miR-671-3p 0 1 1
chr15:64963446|64963628 hsa-miR-199b-3p 0 0 1
chr15:64963446|64963628 hsa-miR-199a-3p 0 0 1
chr15:64963446|64963628 hsa-miR-142-3p 0 0 1
chr15:64963446|64963628 hsa-miR-720 0 0 1
chr15:64963446|64963628 hsa-miR-219-1-3p 0 0 1
chr15:64963446|64963628 hsa-miR-631 1 0 0
chr15:64963446|64963628 hsa-miR-663b 1 0 0
chr15:64963446|64963628 hsa-miR-3169 0 1 0
chr15:64963446|64963628 hsa-miR-4314 1 1 0
chr15:64963446|64963628 hsa-miR-3650 0 1 0
chr15:64963446|64963628 hsa-miR-3661 1 0 0
chr15:64963446|64963628 hsa-miR-3937 0 1 0
chr15:64963446|64963628 hsa-miR-4420 1 0 0
chr15:64963446|64963628 hsa-miR-3689c 1 0 0
chr15:64963446|64963628 hsa-miR-4642 0 1 0
chr15:64963446|64963628 hsa-miR-4656 1 0 0
chr15:64963446|64963628 hsa-miR-4669 1 0 0
chr15:64963446|64963628 hsa-miR-6860 1 0 0
chr15:64963446|64963628 hsa-miR-8089 1 0 0
chr15:64963446|64963628 hsa-miR-22-5p 1 0 0
chr15:64963446|64963628 hsa-miR-3157-5p 0 1 0
chr15:64963446|64963628 hsa-miR-6861-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6799-5p 1 0 0
chr15:64963446|64963628 hsa-miR-3677-5p 1 0 0
chr15:64963446|64963628 hsa-miR-8069 1 0 0
chr15:64963446|64963628 hsa-miR-4697-3p 0 1 0
chr15:64963446|64963628 hsa-miR-6858-3p 1 0 0
chr15:64963446|64963628 hsa-miR-5088-5p 1 0 0
chr15:64963446|64963628 hsa-miR-204-3p 1 0 0
chr15:64963446|64963628 hsa-miR-4783-3p 1 0 0
chr15:64963446|64963628 hsa-miR-3691-5p 1 0 0
chr15:64963446|64963628 hsa-miR-550b-2-5p 1 0 0
chr15:64963446|64963628 hsa-miR-941 1 0 0
chr15:64963446|64963628 hsa-miR-4740-5p 0 1 0
chr15:64963446|64963628 hsa-miR-1307-3p 1 0 0
chr15:64963446|64963628 hsa-miR-597-3p 0 1 0
chr15:64963446|64963628 hsa-miR-6895-3p 1 1 0
chr15:64963446|64963628 hsa-miR-3617-3p 0 1 0
chr15:64963446|64963628 hsa-miR-1233-5p 1 0 0
chr15:64963446|64963628 hsa-miR-3689b-3p 1 0 0
chr15:64963446|64963628 hsa-miR-6778-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6763-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6779-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6780a-5p 0 1 0
chr15:64963446|64963628 hsa-miR-5196-5p 1 0 0
chr15:64963446|64963628 hsa-miR-3689a-3p 1 0 0
chr15:64963446|64963628 hsa-miR-6777-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6889-5p 1 0 0
chr15:64963446|64963628 hsa-miR-4700-5p 1 0 0
chr15:64963446|64963628 hsa-miR-4646-5p 1 1 0
chr15:64963446|64963628 hsa-miR-4747-5p 1 0 0
chr15:64963446|64963628 hsa-miR-6724-5p 1 0 0
chr15:64963446|64963628 hsa-miR-323b-5p 1 0 0
chr15:64963446|64963628 hsa-miR-3129-5p 0 1 0
chr15:64963446|64963628 hsa-miR-10523-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:64963446|64963628
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MTGADATDYTRTHRVNSSLTARDTLLL
Nucleotide Sequence CTGACGGGTGCTGATGCCACTGACTATACAAGAACACACCGGGTCAACTCATCATTGACAGCGAGAGACACACTACTGCTC
CircID chr15:64963446|64963628
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MYSQWHQHPSASLFLQVRQAHRFSLCLGSRTDGHLHDRRHLH
Nucleotide Sequence TTGTATAGTCAGTGGCATCAGCACCCGTCAGCCAGCCTTTTCCTTCAGGTTCGTCAGGCTCACCGGTTCTCACTGTGTCTGGGAAGTAGGACTGATGGTCATCTTCATGACAGGCGGCATCTCCACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab