CircRNA Information

General Information
circRNA Basic Information
CircID chr15:71748466|71748594
Strand +
CircType exon
Host Gene ENSG00000187720.13;
Algorism CIRI2;
Sequence CCTTTCGCTCCACTCGGTGAGGAACCAGCTCTTGGCACAGGGTCCCATGTCGCAGTTCTCAATGTCATTCGGCCGGAGCTTCATGTTGCATTCCTCATCGTCAACCACATCCCCAATGTTGCTCACACA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:71748466|71748594 hsa-miR-10a-5p 0 0 1
chr15:71748466|71748594 hsa-miR-10a-3p 0 0 1
chr15:71748466|71748594 hsa-miR-10b-5p 0 0 1
chr15:71748466|71748594 hsa-miR-10b-3p 0 0 1
chr15:71748466|71748594 hsa-miR-146a-5p 0 0 1
chr15:71748466|71748594 hsa-miR-146a-3p 0 0 1
chr15:71748466|71748594 hsa-miR-335-5p 0 0 1
chr15:71748466|71748594 hsa-miR-335-3p 0 0 1
chr15:71748466|71748594 hsa-miR-504-5p 0 0 1
chr15:71748466|71748594 hsa-miR-504-3p 0 0 1
chr15:71748466|71748594 hsa-miR-563 0 0 1
chr15:71748466|71748594 hsa-miR-580-5p 0 0 1
chr15:71748466|71748594 hsa-miR-580-3p 0 0 1
chr15:71748466|71748594 hsa-miR-589-5p 0 0 1
chr15:71748466|71748594 hsa-miR-589-3p 0 0 1
chr15:71748466|71748594 hsa-miR-1227-5p 0 0 1
chr15:71748466|71748594 hsa-miR-1227-3p 0 0 1
chr15:71748466|71748594 hsa-miR-127-5p 0 0 1
chr15:71748466|71748594 hsa-miR-146b-5p 0 0 1
chr15:71748466|71748594 hsa-miR-1300 0 0 1
chr15:71748466|71748594 hsa-miR-608 1 0 0
chr15:71748466|71748594 hsa-miR-1268a 1 0 0
chr15:71748466|71748594 hsa-miR-2110 1 0 0
chr15:71748466|71748594 hsa-miR-3131 1 0 0
chr15:71748466|71748594 hsa-miR-3147 1 0 0
chr15:71748466|71748594 hsa-miR-4322 1 0 0
chr15:71748466|71748594 hsa-miR-4260 1 0 0
chr15:71748466|71748594 hsa-miR-3683 0 1 0
chr15:71748466|71748594 hsa-miR-1268b 1 0 0
chr15:71748466|71748594 hsa-miR-4450 1 0 0
chr15:71748466|71748594 hsa-miR-4525 1 0 0
chr15:71748466|71748594 hsa-miR-4651 1 0 0
chr15:71748466|71748594 hsa-miR-4675 1 0 0
chr15:71748466|71748594 hsa-miR-5572 1 0 0
chr15:71748466|71748594 hsa-miR-5698 1 0 0
chr15:71748466|71748594 hsa-miR-8060 0 1 0
chr15:71748466|71748594 hsa-miR-12115 0 1 0
chr15:71748466|71748594 hsa-miR-4665-3p 1 0 0
chr15:71748466|71748594 hsa-miR-6747-5p 1 0 0
chr15:71748466|71748594 hsa-miR-3150a-3p 1 0 0
chr15:71748466|71748594 hsa-miR-6825-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6857-5p 1 1 0
chr15:71748466|71748594 hsa-miR-6854-5p 1 0 0
chr15:71748466|71748594 hsa-miR-5187-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6732-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6810-5p 1 0 0
chr15:71748466|71748594 hsa-miR-1226-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6740-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6834-5p 1 0 0
chr15:71748466|71748594 hsa-miR-4743-5p 1 0 0
chr15:71748466|71748594 hsa-miR-4787-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6717-5p 1 0 0
chr15:71748466|71748594 hsa-miR-3925-5p 1 0 0
chr15:71748466|71748594 hsa-miR-5010-5p 1 0 0
chr15:71748466|71748594 hsa-miR-3191-3p 1 0 0
chr15:71748466|71748594 hsa-miR-1180-3p 1 0 0
chr15:71748466|71748594 hsa-miR-4763-3p 1 0 0
chr15:71748466|71748594 hsa-miR-5001-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6752-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6756-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6803-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6842-5p 1 0 0
chr15:71748466|71748594 hsa-miR-7110-5p 1 0 0
chr15:71748466|71748594 hsa-miR-10401-5p 1 0 0
chr15:71748466|71748594 hsa-miR-6751-5p 1 1 0
chr15:71748466|71748594 hsa-miR-6763-5p 1 0 0
chr15:71748466|71748594 hsa-miR-4700-5p 1 0 0
chr15:71748466|71748594 hsa-miR-7153-5p 0 1 0
chr15:71748466|71748594 hsa-miR-380-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:71748466|71748594
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MAQGPMSQFSMSFGRSFMLHSSSSTTSPMLLT
Nucleotide Sequence TTGGCACAGGGTCCCATGTCGCAGTTCTCAATGTCATTCGGCCGGAGCTTCATGTTGCATTCCTCATCGTCAACCACATCCCCAATGTTGCTCACA
CircID chr15:71748466|71748594
ORF Type ORF2
Protein Length 28
Nucleotide Length 84
Protein Sequence MKLRPNDIENCDMGPCAKSWFLTEWSER
Nucleotide Sequence ATGAAGCTCCGGCCGAATGACATTGAGAACTGCGACATGGGACCCTGTGCCAAGAGCTGGTTCCTCACCGAGTGGAGCGAAAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab