CircRNA Information

General Information
circRNA Basic Information
CircID chr15:73563236|73570381
Strand -
CircType exon
Host Gene ENSG00000156642.15;
Algorism CIRI2;
Sequence ATTGGTCCAGCTGGTTCATCATCGTCAGGAACCTCATCTGGCCTCTTCCTCTTCTCATACACAACAATGATCACCACAAGGATGATAATTTCAGCCAGAATTCCCAAGAAAGGCCAGAGTGGGGCCAGGTGGCTCCGCACCCTGAGGACAGTGACAACAGAGGCGGAGCCAATGGCGTTGGTGGCATTACATTCATACTCGCCAGGGTCTTCCGTGATCTGCAGGTTCACAATGTTCAACTCAGTGTAATTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:73563236|73570381 hsa-miR-149-5p 0 0 1
chr15:73563236|73570381 hsa-miR-149-3p 0 0 1
chr15:73563236|73570381 hsa-miR-380-5p 0 0 1
chr15:73563236|73570381 hsa-miR-380-3p 0 0 1
chr15:73563236|73570381 hsa-miR-504-5p 0 0 1
chr15:73563236|73570381 hsa-miR-504-3p 0 0 1
chr15:73563236|73570381 hsa-miR-571 0 0 1
chr15:73563236|73570381 hsa-miR-578 0 0 1
chr15:73563236|73570381 hsa-miR-635 0 0 1
chr15:73563236|73570381 hsa-miR-658 0 0 1
chr15:73563236|73570381 hsa-miR-668-5p 0 0 1
chr15:73563236|73570381 hsa-miR-668-3p 0 0 1
chr15:73563236|73570381 hsa-miR-675-5p 0 0 1
chr15:73563236|73570381 hsa-miR-675-3p 0 0 1
chr15:73563236|73570381 hsa-miR-1200 0 0 1
chr15:73563236|73570381 hsa-miR-1208 0 0 1
chr15:73563236|73570381 hsa-miR-1253 0 0 1
chr15:73563236|73570381 hsa-miR-1266-5p 0 0 1
chr15:73563236|73570381 hsa-miR-1266-3p 0 0 1
chr15:73563236|73570381 hsa-miR-1267 0 0 1
chr15:73563236|73570381 hsa-miR-1272 0 0 1
chr15:73563236|73570381 hsa-miR-1207-3p 0 0 1
chr15:73563236|73570381 hsa-miR-362-5p 0 0 1
chr15:73563236|73570381 hsa-miR-7 0 0 1
chr15:73563236|73570381 hsa-miR-1300 0 0 1
chr15:73563236|73570381 hsa-miR-219-1-3p 0 0 1
chr15:73563236|73570381 hsa-miR-365 0 0 1
chr15:73563236|73570381 hsa-miR-4286 0 1 0
chr15:73563236|73570381 hsa-miR-3916 0 1 0
chr15:73563236|73570381 hsa-miR-4450 1 0 0
chr15:73563236|73570381 hsa-miR-4466 0 1 0
chr15:73563236|73570381 hsa-miR-4483 1 0 0
chr15:73563236|73570381 hsa-miR-4502 1 1 0
chr15:73563236|73570381 hsa-miR-4663 1 0 0
chr15:73563236|73570381 hsa-miR-7-5p 0 1 0
chr15:73563236|73570381 hsa-miR-6894-5p 1 0 0
chr15:73563236|73570381 hsa-miR-125a-3p 1 1 0
chr15:73563236|73570381 hsa-miR-6089 1 0 0
chr15:73563236|73570381 hsa-miR-6867-5p 1 1 0
chr15:73563236|73570381 hsa-miR-3064-5p 1 0 0
chr15:73563236|73570381 hsa-miR-23b-5p 1 1 0
chr15:73563236|73570381 hsa-miR-6783-5p 0 1 0
chr15:73563236|73570381 hsa-miR-6871-5p 1 0 0
chr15:73563236|73570381 hsa-miR-23a-5p 1 1 0
chr15:73563236|73570381 hsa-miR-4793-3p 1 0 0
chr15:73563236|73570381 hsa-miR-6765-3p 0 1 0
chr15:73563236|73570381 hsa-miR-4640-5p 1 0 0
chr15:73563236|73570381 hsa-miR-5001-3p 1 0 0
chr15:73563236|73570381 hsa-miR-3158-5p 0 1 0
chr15:73563236|73570381 hsa-miR-598-5p 1 0 0
chr15:73563236|73570381 hsa-miR-6755-3p 0 1 0
chr15:73563236|73570381 hsa-miR-328-3p 0 1 0
chr15:73563236|73570381 hsa-miR-514a-5p 0 1 0
chr15:73563236|73570381 hsa-miR-4763-3p 1 0 0
chr15:73563236|73570381 hsa-miR-6812-5p 1 0 0
chr15:73563236|73570381 hsa-miR-6763-5p 1 0 0
chr15:73563236|73570381 hsa-miR-4726-5p 1 0 0
chr15:73563236|73570381 hsa-miR-6877-3p 1 0 0
chr15:73563236|73570381 hsa-miR-2682-3p 1 0 0
chr15:73563236|73570381 hsa-miR-6859-5p 0 1 0
chr15:73563236|73570381 hsa-miR-6744-3p 0 1 0
chr15:73563236|73570381 hsa-miR-3922-3p 0 1 0
chr15:73563236|73570381 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:73563236|73570381
ORF Type ORF1
Protein Length 60
Nucleotide Length 183
Protein Sequence MITTRMIISARIPKKGQSGARWLRTLRTVTTEAEPMALVALHSYSPGSSVICRFTMFNSV
Nucleotide Sequence ATGATCACCACAAGGATGATAATTTCAGCCAGAATTCCCAAGAAAGGCCAGAGTGGGGCCAGGTGGCTCCGCACCCTGAGGACAGTGACAACAGAGGCGGAGCCAATGGCGTTGGTGGCATTACATTCATACTCGCCAGGGTCTTCCGTGATCTGCAGGTTCACAATGTTCAACTCAGTGTAA

CircID chr15:73563236|73570381
ORF Type ORF2
Protein Length 79
Nucleotide Length 237
Protein Sequence MNIVNLQITEDPGEYECNATNAIGSASVVTVLRVRSHLAPLWPFLGILAEIIILVVIIVVYEKRKRPDEVPDDDEPAGP
Nucleotide Sequence TTGAACATTGTGAACCTGCAGATCACGGAAGACCCTGGCGAGTATGAATGTAATGCCACCAACGCCATTGGCTCCGCCTCTGTTGTCACTGTCCTCAGGGTGCGGAGCCACCTGGCCCCACTCTGGCCTTTCTTGGGAATTCTGGCTGAAATTATCATCCTTGTGGTGATCATTGTTGTGTATGAGAAGAGGAAGAGGCCAGATGAGGTTCCTGACGATGATGAACCAGCTGGACCA

CircID chr15:73563236|73570381
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MASMNVMPPTPLAPPLLSLSSGCGATWPHSGLSWEFWLKLSSLW
Nucleotide Sequence CTGGCGAGTATGAATGTAATGCCACCAACGCCATTGGCTCCGCCTCTGTTGTCACTGTCCTCAGGGTGCGGAGCCACCTGGCCCCACTCTGGCCTTTCTTGGGAATTCTGGCTGAAATTATCATCCTTGTGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites