CircRNA Information

General Information
circRNA Basic Information
CircID chr15:74033219|74033365
Strand +
CircType exon
Host Gene ENSG00000140464.18;
Algorism CIRI2;
Sequence CTCACTTCCTATGACGGGGCTCCTGGGGCTAGGCGGTCCATCCAGGTGGGGTGGTGAGACTGCCTTGGAGGTGCTGGGCCTGGGCTGCTCCGGGGAGCTCCGAGCCAACCTTGCCTCCTTCCCCTCCTCAGACTCCATCTTGATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:74033219|74033365 hsa-miR-197-5p 0 0 1
chr15:74033219|74033365 hsa-miR-197-3p 0 0 1
chr15:74033219|74033365 hsa-miR-619-5p 0 0 1
chr15:74033219|74033365 hsa-miR-619-3p 0 0 1
chr15:74033219|74033365 hsa-miR-650 0 1 1
chr15:74033219|74033365 hsa-miR-665 0 0 1
chr15:74033219|74033365 hsa-miR-1229-5p 0 0 1
chr15:74033219|74033365 hsa-miR-1229-3p 0 0 1
chr15:74033219|74033365 hsa-miR-1203 0 0 1
chr15:74033219|74033365 hsa-miR-1225-3p 0 0 1
chr15:74033219|74033365 hsa-miR-1289 0 0 1
chr15:74033219|74033365 hsa-miR-1224-3p 0 0 1
chr15:74033219|74033365 hsa-miR-220b 0 0 1
chr15:74033219|74033365 hsa-miR-484 0 1 0
chr15:74033219|74033365 hsa-miR-612 1 0 0
chr15:74033219|74033365 hsa-miR-658 1 0 0
chr15:74033219|74033365 hsa-miR-4309 0 1 0
chr15:74033219|74033365 hsa-miR-4323 0 1 0
chr15:74033219|74033365 hsa-miR-4271 0 1 0
chr15:74033219|74033365 hsa-miR-3714 0 1 0
chr15:74033219|74033365 hsa-miR-4533 1 1 0
chr15:74033219|74033365 hsa-miR-4647 0 1 0
chr15:74033219|74033365 hsa-miR-4739 1 0 0
chr15:74033219|74033365 hsa-miR-6081 1 1 0
chr15:74033219|74033365 hsa-miR-6133 0 1 0
chr15:74033219|74033365 hsa-miR-8082 0 1 0
chr15:74033219|74033365 hsa-miR-8089 1 1 0
chr15:74033219|74033365 hsa-miR-12119 0 1 0
chr15:74033219|74033365 hsa-miR-6840-3p 0 1 0
chr15:74033219|74033365 hsa-miR-6765-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6089 1 0 0
chr15:74033219|74033365 hsa-miR-6880-5p 1 0 0
chr15:74033219|74033365 hsa-miR-4695-5p 1 1 0
chr15:74033219|74033365 hsa-miR-3189-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6765-3p 0 1 0
chr15:74033219|74033365 hsa-miR-1908-3p 1 0 0
chr15:74033219|74033365 hsa-miR-296-3p 0 1 0
chr15:74033219|74033365 hsa-miR-4707-5p 1 0 0
chr15:74033219|74033365 hsa-miR-4758-3p 0 1 0
chr15:74033219|74033365 hsa-miR-1343-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6737-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6743-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6754-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6756-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6797-5p 1 0 0
chr15:74033219|74033365 hsa-miR-7111-5p 1 0 0
chr15:74033219|74033365 hsa-miR-4728-5p 1 1 0
chr15:74033219|74033365 hsa-miR-5196-5p 1 1 0
chr15:74033219|74033365 hsa-miR-6780b-5p 1 1 0
chr15:74033219|74033365 hsa-miR-328-5p 1 0 0
chr15:74033219|74033365 hsa-miR-4649-5p 1 0 0
chr15:74033219|74033365 hsa-miR-4725-3p 0 1 0
chr15:74033219|74033365 hsa-miR-4745-5p 1 0 0
chr15:74033219|74033365 hsa-miR-6795-5p 0 1 0
chr15:74033219|74033365 hsa-miR-6858-5p 1 1 0
chr15:74033219|74033365 hsa-miR-6831-5p 1 0 0
chr15:74033219|74033365 hsa-miR-34b-5p 0 1 0
chr15:74033219|74033365 hsa-miR-3198 1 1 0
chr15:74033219|74033365 hsa-miR-10398-3p 1 1 0
chr15:74033219|74033365 hsa-miR-3173-3p 0 1 0
chr15:74033219|74033365 hsa-miR-4747-5p 1 1 0
chr15:74033219|74033365 hsa-miR-6891-5p 0 1 0
chr15:74033219|74033365 hsa-miR-4667-5p 1 1 0
chr15:74033219|74033365 hsa-miR-6511a-3p 0 1 0
chr15:74033219|74033365 hsa-miR-6511b-3p 1 1 0
chr15:74033219|74033365 hsa-miR-4690-3p 0 1 0
chr15:74033219|74033365 hsa-miR-520e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr15:74033219|74033365
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MTGLLGLGGPSRWGGETALEVLGLGCSGELRANLASFPSSDSILM
Nucleotide Sequence ATGACGGGGCTCCTGGGGCTAGGCGGTCCATCCAGGTGGGGTGGTGAGACTGCCTTGGAGGTGCTGGGCCTGGGCTGCTCCGGGGAGCTCCGAGCCAACCTTGCCTCCTTCCCCTCCTCAGACTCCATCTTGATG

CircID chr15:74033219|74033365
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MPWRCWAWAAPGSSEPTLPPSPPQTPS
Nucleotide Sequence CTGCCTTGGAGGTGCTGGGCCTGGGCTGCTCCGGGGAGCTCCGAGCCAACCTTGCCTCCTTCCCCTCCTCAGACTCCATCTTGA

CircID chr15:74033219|74033365
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MESEEGKEARLARSSPEQPRPSTSKAVSPPHLDGPPSPRSPVIGSE
Nucleotide Sequence ATGGAGTCTGAGGAGGGGAAGGAGGCAAGGTTGGCTCGGAGCTCCCCGGAGCAGCCCAGGCCCAGCACCTCCAAGGCAGTCTCACCACCCCACCTGGATGGACCGCCTAGCCCCAGGAGCCCCGTCATAGGAAGTGAG

CircID chr15:74033219|74033365
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MRRGRRQGWLGAPRSSPGPAPPRQSHHPTWMDRLAPGAPS
Nucleotide Sequence CTGAGGAGGGGAAGGAGGCAAGGTTGGCTCGGAGCTCCCCGGAGCAGCCCAGGCCCAGCACCTCCAAGGCAGTCTCACCACCCCACCTGGATGGACCGCCTAGCCCCAGGAGCCCCGTCATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites