CircRNA Information

General Information
circRNA Basic Information
CircID chr15:74635665|74635823
Strand -
CircType exon
Host Gene ENSG00000179335.17;
Algorism CIRI2;
Sequence TTGCCAATCCCTTGCACCCTATACCAGACAATTGCCTGTAGCACCTATTGGTCTCAGATCTCTTACCCACTGCTCACCAAGTCCCAGGCTCCAGAGGGGGACAAAATCCACTGCAGGCCAGGTCTATAGGGTGGCACTCCTGTTGTCCCAAACCCCAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:74635665|74635823 hsa-miR-182-5p 0 0 1
chr15:74635665|74635823 hsa-miR-182-3p 0 0 1
chr15:74635665|74635823 hsa-miR-221-5p 0 0 1
chr15:74635665|74635823 hsa-miR-221-3p 0 0 1
chr15:74635665|74635823 hsa-miR-222-5p 0 0 1
chr15:74635665|74635823 hsa-miR-222-3p 0 0 1
chr15:74635665|74635823 hsa-miR-555 0 0 1
chr15:74635665|74635823 hsa-miR-631 0 0 1
chr15:74635665|74635823 hsa-miR-632 0 0 1
chr15:74635665|74635823 hsa-miR-661 1 0 1
chr15:74635665|74635823 hsa-miR-1227-5p 0 0 1
chr15:74635665|74635823 hsa-miR-1227-3p 0 0 1
chr15:74635665|74635823 hsa-miR-1231 0 0 1
chr15:74635665|74635823 hsa-miR-1290 0 0 1
chr15:74635665|74635823 hsa-miR-769-5p 0 0 1
chr15:74635665|74635823 hsa-miR-1302 0 0 1
chr15:74635665|74635823 hsa-miR-876-5p 0 0 1
chr15:74635665|74635823 hsa-miR-516b 0 0 1
chr15:74635665|74635823 hsa-miR-612 1 0 0
chr15:74635665|74635823 hsa-miR-762 1 0 0
chr15:74635665|74635823 hsa-miR-933 1 0 0
chr15:74635665|74635823 hsa-miR-1299 1 0 0
chr15:74635665|74635823 hsa-miR-1268a 1 0 0
chr15:74635665|74635823 hsa-miR-2278 1 0 0
chr15:74635665|74635823 hsa-miR-2861 1 0 0
chr15:74635665|74635823 hsa-miR-3137 1 0 0
chr15:74635665|74635823 hsa-miR-3138 1 0 0
chr15:74635665|74635823 hsa-miR-3147 1 0 0
chr15:74635665|74635823 hsa-miR-3170 1 0 0
chr15:74635665|74635823 hsa-miR-4298 1 0 0
chr15:74635665|74635823 hsa-miR-3661 1 0 0
chr15:74635665|74635823 hsa-miR-3907 1 0 0
chr15:74635665|74635823 hsa-miR-3917 1 0 0
chr15:74635665|74635823 hsa-miR-3936 1 0 0
chr15:74635665|74635823 hsa-miR-1268b 1 0 0
chr15:74635665|74635823 hsa-miR-4450 1 0 0
chr15:74635665|74635823 hsa-miR-5572 1 0 0
chr15:74635665|74635823 hsa-miR-6081 1 0 0
chr15:74635665|74635823 hsa-miR-6086 1 0 0
chr15:74635665|74635823 hsa-miR-8052 1 0 0
chr15:74635665|74635823 hsa-miR-8089 1 0 0
chr15:74635665|74635823 hsa-miR-135a-3p 1 0 0
chr15:74635665|74635823 hsa-miR-150-3p 1 0 0
chr15:74635665|74635823 hsa-miR-6857-5p 1 0 0
chr15:74635665|74635823 hsa-miR-3192-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6880-5p 1 0 0
chr15:74635665|74635823 hsa-miR-3622b-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6748-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6793-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6732-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6782-5p 1 0 0
chr15:74635665|74635823 hsa-miR-1226-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6784-5p 1 0 0
chr15:74635665|74635823 hsa-miR-4640-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6749-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6869-5p 1 0 0
chr15:74635665|74635823 hsa-miR-4763-3p 1 0 0
chr15:74635665|74635823 hsa-miR-6769b-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6812-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6737-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6819-5p 1 0 0
chr15:74635665|74635823 hsa-miR-7107-5p 1 0 0
chr15:74635665|74635823 hsa-miR-10401-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6763-5p 1 0 0
chr15:74635665|74635823 hsa-miR-328-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6846-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6848-5p 1 0 0
chr15:74635665|74635823 hsa-miR-365a-5p 1 0 0
chr15:74635665|74635823 hsa-miR-365b-5p 1 0 0
chr15:74635665|74635823 hsa-miR-3198 1 0 0
chr15:74635665|74635823 hsa-miR-6736-5p 1 0 0
chr15:74635665|74635823 hsa-miR-6855-5p 1 0 0
chr15:74635665|74635823 hsa-miR-4646-5p 1 0 0
chr15:74635665|74635823 hsa-miR-541-3p 1 0 0
chr15:74635665|74635823 hsa-miR-330-5p 1 0 0
chr15:74635665|74635823 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr15:74635665|74635823
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence LPIPCTLYQTIACSTYWSQISYPLLTKSQAPEGDKIHCRPGL
Nucleotide Sequence TTGCCAATCCCTTGCACCCTATACCAGACAATTGCCTGTAGCACCTATTGGTCTCAGATCTCTTACCCACTGCTCACCAAGTCCCAGGCTCCAGAGGGGGACAAAATCCACTGCAGGCCAGGTCTATAG
CircID chr15:74635665|74635823
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MPVAPIGLRSLTHCSPSPRLQRGTKSTAGQVYRVALLLSQTP
Nucleotide Sequence TTGCCTGTAGCACCTATTGGTCTCAGATCTCTTACCCACTGCTCACCAAGTCCCAGGCTCCAGAGGGGGACAAAATCCACTGCAGGCCAGGTCTATAGGGTGGCACTCCTGTTGTCCCAAACCCCA
CircID chr15:74635665|74635823
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MVSDLLPTAHQVPGSRGGQNPLQARSIGWHSCCPKPQ
Nucleotide Sequence TTGGTCTCAGATCTCTTACCCACTGCTCACCAAGTCCCAGGCTCCAGAGGGGGACAAAATCCACTGCAGGCCAGGTCTATAGGGTGGCACTCCTGTTGTCCCAAACCCCAA
CircID chr15:74635665|74635823
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence LGFGTTGVPPYRPGLQWILSPSGAWDLVSSG
Nucleotide Sequence TTGGGGTTTGGGACAACAGGAGTGCCACCCTATAGACCTGGCCTGCAGTGGATTTTGTCCCCCTCTGGAGCCTGGGACTTGGTGAGCAGTGGGTAA
CircID chr15:74635665|74635823
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MGQQECHPIDLACSGFCPPLEPGTW
Nucleotide Sequence TTGGGACAACAGGAGTGCCACCCTATAGACCTGGCCTGCAGTGGATTTTGTCCCCCTCTGGAGCCTGGGACTTGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab