CircRNA Information

General Information
circRNA Basic Information
CircID chr15:74800425|74800746
Strand +
CircType exon
Host Gene ENSG00000103653.15;
Algorism CIRI2;
Sequence CTCCGAACTCCCCCTTCCCGATGGTCTGCAGCAGCTTCAGCTCCTTCATGTTCAGGGCCCAGCCGCCTGTGGGGAGGGGCCAGTGAGGGCCTGGAGGCCACTAGGGACATGGCTGGGATGACAGAGGCTGACTGGACTATCAGGCACTGGGGTTCTCTGGAGGTTCCTGGATGGGGCAGTGCCAGGAAGCCTGCGTGGGAGGAGGTGGGTGGGCAAGAGGTCTGGGGTGGGGTGCACTCACTGCGGTAGAACTCATCCTGGGCCGCCACTGTGCCCTCCATGACCTTTGGTTTAATGAGGCGCGTACAGAGTCCATCTGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:74800425|74800746 hsa-miR-193b-5p 0 0 1
chr15:74800425|74800746 hsa-miR-193b-3p 0 0 1
chr15:74800425|74800746 hsa-miR-519e-5p 0 0 1
chr15:74800425|74800746 hsa-miR-519e-3p 0 0 1
chr15:74800425|74800746 hsa-miR-589-5p 0 0 1
chr15:74800425|74800746 hsa-miR-589-3p 0 0 1
chr15:74800425|74800746 hsa-miR-662 0 0 1
chr15:74800425|74800746 hsa-miR-708-5p 0 0 1
chr15:74800425|74800746 hsa-miR-708-3p 0 0 1
chr15:74800425|74800746 hsa-miR-665 0 0 1
chr15:74800425|74800746 hsa-miR-873-5p 0 0 1
chr15:74800425|74800746 hsa-miR-873-3p 0 0 1
chr15:74800425|74800746 hsa-miR-1291 0 1 1
chr15:74800425|74800746 hsa-miR-1255a 0 0 1
chr15:74800425|74800746 hsa-miR-1252-5p 0 0 1
chr15:74800425|74800746 hsa-miR-1252-3p 0 0 1
chr15:74800425|74800746 hsa-miR-1825 0 0 1
chr15:74800425|74800746 hsa-miR-127-5p 0 1 1
chr15:74800425|74800746 hsa-miR-296-5p 0 0 1
chr15:74800425|74800746 hsa-miR-532-3p 0 1 1
chr15:74800425|74800746 hsa-miR-525-5p 0 0 1
chr15:74800425|74800746 hsa-miR-1224-3p 1 1 1
chr15:74800425|74800746 hsa-miR-28-5p 0 1 1
chr15:74800425|74800746 hsa-miR-490-5p 0 0 1
chr15:74800425|74800746 hsa-miR-324-3p 0 0 1
chr15:74800425|74800746 hsa-miR-520a-5p 0 0 1
chr15:74800425|74800746 hsa-miR-515-3p 0 0 1
chr15:74800425|74800746 hsa-miR-193a-3p 0 0 1
chr15:74800425|74800746 hsa-miR-516a-3p 0 0 1
chr15:74800425|74800746 hsa-miR-128 0 0 1
chr15:74800425|74800746 hsa-miR-550 0 0 1
chr15:74800425|74800746 hsa-miR-1255b 0 0 1
chr15:74800425|74800746 hsa-miR-1201 0 0 1
chr15:74800425|74800746 hsa-miR-602 1 0 0
chr15:74800425|74800746 hsa-miR-640 1 0 0
chr15:74800425|74800746 hsa-miR-762 1 0 0
chr15:74800425|74800746 hsa-miR-1913 0 1 0
chr15:74800425|74800746 hsa-miR-3135a 0 1 0
chr15:74800425|74800746 hsa-miR-3154 0 1 0
chr15:74800425|74800746 hsa-miR-3168 0 1 0
chr15:74800425|74800746 hsa-miR-4268 0 1 0
chr15:74800425|74800746 hsa-miR-3937 0 1 0
chr15:74800425|74800746 hsa-miR-4505 0 1 0
chr15:74800425|74800746 hsa-miR-4674 1 1 0
chr15:74800425|74800746 hsa-miR-4754 1 0 0
chr15:74800425|74800746 hsa-miR-5698 0 1 0
chr15:74800425|74800746 hsa-miR-6075 0 1 0
chr15:74800425|74800746 hsa-miR-7977 0 1 0
chr15:74800425|74800746 hsa-miR-8089 1 0 0
chr15:74800425|74800746 hsa-miR-1843 0 1 0
chr15:74800425|74800746 hsa-miR-17-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6749-3p 0 1 0
chr15:74800425|74800746 hsa-miR-4665-3p 1 0 0
chr15:74800425|74800746 hsa-miR-6822-3p 1 0 0
chr15:74800425|74800746 hsa-miR-766-3p 1 0 0
chr15:74800425|74800746 hsa-miR-1225-3p 1 0 0
chr15:74800425|74800746 hsa-miR-4722-5p 1 0 0
chr15:74800425|74800746 hsa-miR-3677-5p 0 1 0
chr15:74800425|74800746 hsa-miR-3189-5p 0 1 0
chr15:74800425|74800746 hsa-miR-6849-3p 1 0 0
chr15:74800425|74800746 hsa-miR-877-3p 1 0 0
chr15:74800425|74800746 hsa-miR-345-3p 0 1 0
chr15:74800425|74800746 hsa-miR-1226-5p 1 1 0
chr15:74800425|74800746 hsa-miR-7108-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6894-3p 0 1 0
chr15:74800425|74800746 hsa-miR-5001-3p 1 0 0
chr15:74800425|74800746 hsa-miR-4783-5p 1 0 0
chr15:74800425|74800746 hsa-miR-6821-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6878-3p 0 1 0
chr15:74800425|74800746 hsa-miR-1304-3p 0 1 0
chr15:74800425|74800746 hsa-miR-1306-5p 0 1 0
chr15:74800425|74800746 hsa-miR-4758-3p 1 0 0
chr15:74800425|74800746 hsa-miR-216a-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6738-3p 1 0 0
chr15:74800425|74800746 hsa-miR-328-3p 1 1 0
chr15:74800425|74800746 hsa-miR-6770-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6760-3p 0 1 0
chr15:74800425|74800746 hsa-miR-4750-3p 1 0 0
chr15:74800425|74800746 hsa-miR-6759-3p 0 1 0
chr15:74800425|74800746 hsa-miR-4650-5p 0 1 0
chr15:74800425|74800746 hsa-miR-10400-5p 1 0 0
chr15:74800425|74800746 hsa-miR-6870-5p 0 1 0
chr15:74800425|74800746 hsa-miR-6726-5p 1 1 0
chr15:74800425|74800746 hsa-miR-5196-5p 0 1 0
chr15:74800425|74800746 hsa-miR-328-5p 1 1 0
chr15:74800425|74800746 hsa-miR-1271-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6773-5p 0 1 0
chr15:74800425|74800746 hsa-miR-6877-3p 1 1 0
chr15:74800425|74800746 hsa-miR-6724-5p 1 0 0
chr15:74800425|74800746 hsa-miR-550a-3-5p 0 1 0
chr15:74800425|74800746 hsa-miR-550a-5p 0 1 0
chr15:74800425|74800746 hsa-miR-4757-5p 0 1 0
chr15:74800425|74800746 hsa-miR-6784-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6862-3p 0 1 0
chr15:74800425|74800746 hsa-miR-4723-3p 1 1 0
chr15:74800425|74800746 hsa-miR-6819-3p 1 1 0
chr15:74800425|74800746 hsa-miR-7114-3p 1 0 0
chr15:74800425|74800746 hsa-miR-6744-3p 1 1 0
chr15:74800425|74800746 hsa-miR-4691-5p 0 1 0
chr15:74800425|74800746 hsa-miR-33b-3p 1 1 0
chr15:74800425|74800746 hsa-miR-6781-3p 0 1 0
chr15:74800425|74800746 hsa-miR-6834-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr15:74800425|74800746
ORF Type ORF1
Protein Length 60
Nucleotide Length 183
Protein Sequence MWGGASEGLEATRDMAGMTEADWTIRHWGSLEVPGWGSARKPAWEEVGGQEVWGGVHSLR
Nucleotide Sequence CTGTGGGGAGGGGCCAGTGAGGGCCTGGAGGCCACTAGGGACATGGCTGGGATGACAGAGGCTGACTGGACTATCAGGCACTGGGGTTCTCTGGAGGTTCCTGGATGGGGCAGTGCCAGGAAGCCTGCGTGGGAGGAGGTGGGTGGGCAAGAGGTCTGGGGTGGGGTGCACTCACTGCGGTAG
CircID chr15:74800425|74800746
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MQQLQLLHVQGPAACGEGPVRAWRPLGTWLG
Nucleotide Sequence CTGCAGCAGCTTCAGCTCCTTCATGTTCAGGGCCCAGCCGCCTGTGGGGAGGGGCCAGTGAGGGCCTGGAGGCCACTAGGGACATGGCTGGGATGA
CircID chr15:74800425|74800746
ORF Type ORF3
Protein Length 51
Nucleotide Length 156
Protein Sequence MTGLSGTGVLWRFLDGAVPGSLRGRRWVGKRSGVGCTHCGRTHPGPPLCPP
Nucleotide Sequence CTGACTGGACTATCAGGCACTGGGGTTCTCTGGAGGTTCCTGGATGGGGCAGTGCCAGGAAGCCTGCGTGGGAGGAGGTGGGTGGGCAAGAGGTCTGGGGTGGGGTGCACTCACTGCGGTAGAACTCATCCTGGGCCGCCACTGTGCCCTCCATGA
CircID chr15:74800425|74800746
ORF Type ORF4
Protein Length 63
Nucleotide Length 189
Protein Sequence MDYQALGFSGGSWMGQCQEACVGGGGWARGLGWGALTAVELILGRHCALHDLWFNEARTESIC
Nucleotide Sequence CTGGACTATCAGGCACTGGGGTTCTCTGGAGGTTCCTGGATGGGGCAGTGCCAGGAAGCCTGCGTGGGAGGAGGTGGGTGGGCAAGAGGTCTGGGGTGGGGTGCACTCACTGCGGTAGAACTCATCCTGGGCCGCCACTGTGCCCTCCATGACCTTTGGTTTAATGAGGCGCGTACAGAGTCCATCTGC
CircID chr15:74800425|74800746
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MDSVRASLNQRSWRAQWRPRMSSTAVSAPHPRPLAHPPPPTQASWHCPIQEPPENPSA
Nucleotide Sequence ATGGACTCTGTACGCGCCTCATTAAACCAAAGGTCATGGAGGGCACAGTGGCGGCCCAGGATGAGTTCTACCGCAGTGAGTGCACCCCACCCCAGACCTCTTGCCCACCCACCTCCTCCCACGCAGGCTTCCTGGCACTGCCCCATCCAGGAACCTCCAGAGAACCCCAGTGCCTGA
CircID chr15:74800425|74800746
ORF Type ORF6
Protein Length 54
Nucleotide Length 165
Protein Sequence MPTHLLPRRLPGTAPSRNLQRTPVPDSPVSLCHPSHVPSGLQALTGPSPQAAGP
Nucleotide Sequence TTGCCCACCCACCTCCTCCCACGCAGGCTTCCTGGCACTGCCCCATCCAGGAACCTCCAGAGAACCCCAGTGCCTGATAGTCCAGTCAGCCTCTGTCATCCCAGCCATGTCCCTAGTGGCCTCCAGGCCCTCACTGGCCCCTCCCCACAGGCGGCTGGGCCCTGA
CircID chr15:74800425|74800746
ORF Type ORF7
Protein Length 93
Nucleotide Length 279
Protein Sequence MEGTVAAQDEFYRSECTPPQTSCPPTSSHAGFLALPHPGTSREPQCLIVQSASVIPAMSLVASRPSLAPPHRRLGPEHEGAEAAADHREGGVR
Nucleotide Sequence ATGGAGGGCACAGTGGCGGCCCAGGATGAGTTCTACCGCAGTGAGTGCACCCCACCCCAGACCTCTTGCCCACCCACCTCCTCCCACGCAGGCTTCCTGGCACTGCCCCATCCAGGAACCTCCAGAGAACCCCAGTGCCTGATAGTCCAGTCAGCCTCTGTCATCCCAGCCATGTCCCTAGTGGCCTCCAGGCCCTCACTGGCCCCTCCCCACAGGCGGCTGGGCCCTGAACATGAAGGAGCTGAAGCTGCTGCAGACCATCGGGAAGGGGGAGTTCGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab