CircRNA Information

General Information
circRNA Basic Information
CircID chr15:74837757|74838341
Strand -
CircType exon
Host Gene ENSG00000140474.11;
Algorism CIRI2;
Sequence CTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCTCAGTGTGAAGCAGCTCCCGCCTCCGGCCCGGGGGCTCCGCTGTAAAGAGAGGGTGTGTGGTGAGGACAGGGTGGCCAGAGGCCCTGTGGGGGGCATAAATGGGGGCCCTCACCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAGGGCATCCTGCTCCCCGCCGGCGGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:74837757|74838341 hsa-miR-197-5p 0 0 1
chr15:74837757|74838341 hsa-miR-197-3p 0 0 1
chr15:74837757|74838341 hsa-miR-10a-5p 0 0 1
chr15:74837757|74838341 hsa-miR-10a-3p 0 0 1
chr15:74837757|74838341 hsa-miR-10b-5p 0 0 1
chr15:74837757|74838341 hsa-miR-10b-3p 0 0 1
chr15:74837757|74838341 hsa-miR-377-5p 0 0 1
chr15:74837757|74838341 hsa-miR-377-3p 0 0 1
chr15:74837757|74838341 hsa-miR-492 0 0 1
chr15:74837757|74838341 hsa-miR-558 0 0 1
chr15:74837757|74838341 hsa-miR-588 0 0 1
chr15:74837757|74838341 hsa-miR-625-5p 0 0 1
chr15:74837757|74838341 hsa-miR-625-3p 0 0 1
chr15:74837757|74838341 hsa-miR-634 0 0 1
chr15:74837757|74838341 hsa-miR-637 0 0 1
chr15:74837757|74838341 hsa-miR-661 0 0 1
chr15:74837757|74838341 hsa-miR-874-5p 0 0 1
chr15:74837757|74838341 hsa-miR-874-3p 0 0 1
chr15:74837757|74838341 hsa-miR-920 0 1 1
chr15:74837757|74838341 hsa-miR-939-5p 0 0 1
chr15:74837757|74838341 hsa-miR-939-3p 0 0 1
chr15:74837757|74838341 hsa-miR-1275 0 1 1
chr15:74837757|74838341 hsa-miR-1252-5p 0 0 1
chr15:74837757|74838341 hsa-miR-1252-3p 0 0 1
chr15:74837757|74838341 hsa-miR-125a-3p 0 1 1
chr15:74837757|74838341 hsa-miR-486-5p 0 1 1
chr15:74837757|74838341 hsa-miR-1225-3p 0 1 1
chr15:74837757|74838341 hsa-miR-296-5p 0 1 1
chr15:74837757|74838341 hsa-miR-146b-3p 0 0 1
chr15:74837757|74838341 hsa-miR-339-5p 1 1 1
chr15:74837757|74838341 hsa-miR-1207-5p 0 0 1
chr15:74837757|74838341 hsa-miR-491-3p 0 0 1
chr15:74837757|74838341 hsa-miR-362-3p 0 0 1
chr15:74837757|74838341 hsa-miR-220b 0 0 1
chr15:74837757|74838341 hsa-miR-220c 0 0 1
chr15:74837757|74838341 hsa-miR-329 0 0 1
chr15:74837757|74838341 hsa-miR-663 0 0 1
chr15:74837757|74838341 hsa-miR-663a 0 1 0
chr15:74837757|74838341 hsa-miR-762 1 1 0
chr15:74837757|74838341 hsa-miR-1538 1 0 0
chr15:74837757|74838341 hsa-miR-378c 0 1 0
chr15:74837757|74838341 hsa-miR-3652 0 1 0
chr15:74837757|74838341 hsa-miR-3665 0 1 0
chr15:74837757|74838341 hsa-miR-3943 0 1 0
chr15:74837757|74838341 hsa-miR-4421 1 0 0
chr15:74837757|74838341 hsa-miR-4487 1 0 0
chr15:74837757|74838341 hsa-miR-4512 0 1 0
chr15:74837757|74838341 hsa-miR-4538 1 0 0
chr15:74837757|74838341 hsa-miR-4706 0 1 0
chr15:74837757|74838341 hsa-miR-4710 0 1 0
chr15:74837757|74838341 hsa-miR-5698 0 1 0
chr15:74837757|74838341 hsa-miR-6072 1 0 0
chr15:74837757|74838341 hsa-miR-6081 0 1 0
chr15:74837757|74838341 hsa-miR-6090 1 0 0
chr15:74837757|74838341 hsa-miR-6879-3p 1 1 0
chr15:74837757|74838341 hsa-miR-149-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6089 0 1 0
chr15:74837757|74838341 hsa-miR-6840-5p 0 1 0
chr15:74837757|74838341 hsa-miR-3189-5p 0 1 0
chr15:74837757|74838341 hsa-miR-185-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6788-3p 1 0 0
chr15:74837757|74838341 hsa-miR-1908-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6803-3p 1 0 0
chr15:74837757|74838341 hsa-miR-1908-5p 0 1 0
chr15:74837757|74838341 hsa-miR-6749-5p 1 0 0
chr15:74837757|74838341 hsa-miR-4743-5p 0 1 0
chr15:74837757|74838341 hsa-miR-3160-3p 0 1 0
chr15:74837757|74838341 hsa-miR-1266-3p 1 0 0
chr15:74837757|74838341 hsa-miR-3690 0 1 0
chr15:74837757|74838341 hsa-miR-6781-5p 1 1 0
chr15:74837757|74838341 hsa-miR-6877-5p 1 0 0
chr15:74837757|74838341 hsa-miR-7162-3p 0 1 0
chr15:74837757|74838341 hsa-miR-3190-5p 1 1 0
chr15:74837757|74838341 hsa-miR-7160-3p 0 1 0
chr15:74837757|74838341 hsa-miR-7846-3p 0 1 0
chr15:74837757|74838341 hsa-miR-4707-5p 1 0 0
chr15:74837757|74838341 hsa-miR-4776-3p 1 0 0
chr15:74837757|74838341 hsa-miR-4695-3p 1 0 0
chr15:74837757|74838341 hsa-miR-7112-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6871-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6752-3p 1 0 0
chr15:74837757|74838341 hsa-miR-4632-3p 1 0 0
chr15:74837757|74838341 hsa-miR-1296-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6865-3p 0 1 0
chr15:74837757|74838341 hsa-miR-6777-3p 1 0 0
chr15:74837757|74838341 hsa-miR-331-3p 0 1 0
chr15:74837757|74838341 hsa-miR-6748-3p 1 1 0
chr15:74837757|74838341 hsa-miR-3620-3p 1 1 0
chr15:74837757|74838341 hsa-miR-1229-3p 1 1 0
chr15:74837757|74838341 hsa-miR-6732-3p 1 1 0
chr15:74837757|74838341 hsa-miR-1228-3p 1 0 0
chr15:74837757|74838341 hsa-miR-3664-5p 0 1 0
chr15:74837757|74838341 hsa-miR-10400-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6787-5p 0 1 0
chr15:74837757|74838341 hsa-miR-1343-5p 1 1 0
chr15:74837757|74838341 hsa-miR-6726-5p 1 1 0
chr15:74837757|74838341 hsa-miR-7107-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6836-5p 1 0 0
chr15:74837757|74838341 hsa-miR-10396b-5p 0 1 0
chr15:74837757|74838341 hsa-miR-1237-5p 1 0 0
chr15:74837757|74838341 hsa-miR-328-5p 0 1 0
chr15:74837757|74838341 hsa-miR-4749-5p 0 1 0
chr15:74837757|74838341 hsa-miR-6777-5p 0 1 0
chr15:74837757|74838341 hsa-miR-6848-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6889-5p 0 1 0
chr15:74837757|74838341 hsa-miR-5008-3p 1 0 0
chr15:74837757|74838341 hsa-miR-5591-5p 0 1 0
chr15:74837757|74838341 hsa-miR-6791-5p 1 1 0
chr15:74837757|74838341 hsa-miR-4757-5p 0 1 0
chr15:74837757|74838341 hsa-miR-9851-5p 0 1 0
chr15:74837757|74838341 hsa-miR-6511a-3p 1 1 0
chr15:74837757|74838341 hsa-miR-6784-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6862-3p 1 0 0
chr15:74837757|74838341 hsa-miR-10401-3p 1 0 0
chr15:74837757|74838341 hsa-miR-6775-3p 1 0 0
chr15:74837757|74838341 hsa-miR-3059-5p 1 0 0
chr15:74837757|74838341 hsa-miR-6511b-3p 1 1 0
chr15:74837757|74838341 hsa-miR-6769b-3p 1 0 0
chr15:74837757|74838341 hsa-miR-4701-5p 1 1 0
chr15:74837757|74838341 hsa-miR-6744-3p 0 1 0
chr15:74837757|74838341 hsa-miR-5699-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:74837757|74838341
ORF Type ORF1
Protein Length 77
Nucleotide Length 231
Protein Sequence LLLQVFSSGHEVLNLSVKQLPPPARGLRCKERVCGEDRVARGPVGGINGGPHLPATAVAPPGCAGTGPGHPAPRRRP
Nucleotide Sequence CTGCTCCTTCAAGTATTCAGCTCGGGCCATGAGGTTCTGAACCTCAGTGTGAAGCAGCTCCCGCCTCCGGCCCGGGGGCTCCGCTGTAAAGAGAGGGTGTGTGGTGAGGACAGGGTGGCCAGAGGCCCTGTGGGGGGCATAAATGGGGGCCCTCACCTGCCAGCAACAGCAGTAGCTCCCCCAGGCTGTGCTGGTACAGGTCCAGGGCATCCTGCTCCCCGCCGGCGGCCT
CircID chr15:74837757|74838341
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MDLYQHSLGELLLLLAGEGPHLCPPQGLWPPCPHHTPSLYSGAPGPEAGAASH
Nucleotide Sequence CTGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGGTGAGGGCCCCCATTTATGCCCCCCACAGGGCCTCTGGCCACCCTGTCCTCACCACACACCCTCTCTTTACAGCGGAGCCCCCGGGCCGGAGGCGGGAGCTGCTTCACACTGA
CircID chr15:74837757|74838341
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MPWTCTSTAWGSYCCCWQVRAPIYAPHRASGHPVLTTHPLFTAEPPGRRRELLHTEVQNLMARAEYLKEQ
Nucleotide Sequence ATGCCCTGGACCTGTACCAGCACAGCCTGGGGGAGCTACTGCTGTTGCTGGCAGGTGAGGGCCCCCATTTATGCCCCCCACAGGGCCTCTGGCCACCCTGTCCTCACCACACACCCTCTCTTTACAGCGGAGCCCCCGGGCCGGAGGCGGGAGCTGCTTCACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGAAGGAGCAG
CircID chr15:74837757|74838341
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MPPTGPLATLSSPHTLSLQRSPRAGGGSCFTLRFRTSWPELNT
Nucleotide Sequence ATGCCCCCCACAGGGCCTCTGGCCACCCTGTCCTCACCACACACCCTCTCTTTACAGCGGAGCCCCCGGGCCGGAGGCGGGAGCTGCTTCACACTGAGGTTCAGAACCTCATGGCCCGAGCTGAATACTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab