CircRNA Information

General Information
circRNA Basic Information
CircID chr15:77484351|77484531
Strand -
CircType exon
Host Gene ENSG00000140382.13;
Algorism CIRI2;
Sequence ACTGCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAAGTCAGGGCATAGGGCAGAACTACCTGTCATGTTGCTACACCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:77484351|77484531 hsa-miR-196b-5p 0 0 1
chr15:77484351|77484531 hsa-miR-196b-3p 0 0 1
chr15:77484351|77484531 hsa-miR-659-5p 0 0 1
chr15:77484351|77484531 hsa-miR-659-3p 0 0 1
chr15:77484351|77484531 hsa-miR-874-5p 0 0 1
chr15:77484351|77484531 hsa-miR-874-3p 0 0 1
chr15:77484351|77484531 hsa-miR-760 0 0 1
chr15:77484351|77484531 hsa-miR-1205 0 0 1
chr15:77484351|77484531 hsa-miR-491-5p 0 0 1
chr15:77484351|77484531 hsa-miR-146b-3p 0 0 1
chr15:77484351|77484531 hsa-miR-1184 0 0 1
chr15:77484351|77484531 hsa-miR-423-5p 0 0 1
chr15:77484351|77484531 hsa-miR-1207-3p 0 0 1
chr15:77484351|77484531 hsa-miR-324-3p 0 0 1
chr15:77484351|77484531 hsa-miR-9 0 0 1
chr15:77484351|77484531 hsa-miR-218 0 0 1
chr15:77484351|77484531 hsa-miR-196a 0 0 1
chr15:77484351|77484531 hsa-miR-638 1 0 0
chr15:77484351|77484531 hsa-miR-3196 1 0 0
chr15:77484351|77484531 hsa-miR-3945 0 1 0
chr15:77484351|77484531 hsa-miR-9-5p 0 1 0
chr15:77484351|77484531 hsa-miR-18a-3p 0 1 0
chr15:77484351|77484531 hsa-miR-128-1-5p 1 1 0
chr15:77484351|77484531 hsa-miR-3194-3p 0 1 0
chr15:77484351|77484531 hsa-miR-1227-5p 0 1 0
chr15:77484351|77484531 hsa-miR-6787-3p 1 1 0
chr15:77484351|77484531 hsa-miR-6796-5p 0 1 0
chr15:77484351|77484531 hsa-miR-6728-3p 0 1 0
chr15:77484351|77484531 hsa-miR-5001-3p 0 1 0
chr15:77484351|77484531 hsa-miR-6739-3p 0 1 0
chr15:77484351|77484531 hsa-miR-4695-3p 0 1 0
chr15:77484351|77484531 hsa-miR-7151-5p 1 1 0
chr15:77484351|77484531 hsa-miR-1914-5p 1 0 0
chr15:77484351|77484531 hsa-miR-6886-3p 1 0 0
chr15:77484351|77484531 hsa-miR-5584-3p 0 1 0
chr15:77484351|77484531 hsa-miR-4712-3p 0 1 0
chr15:77484351|77484531 hsa-miR-3157-3p 0 1 0
chr15:77484351|77484531 hsa-miR-6756-5p 1 0 0
chr15:77484351|77484531 hsa-miR-6779-5p 1 1 0
chr15:77484351|77484531 hsa-miR-6754-3p 1 0 0
chr15:77484351|77484531 hsa-miR-6862-5p 0 1 0
chr15:77484351|77484531 hsa-miR-328-5p 1 0 0
chr15:77484351|77484531 hsa-miR-4758-5p 1 0 0
chr15:77484351|77484531 hsa-miR-3184-5p 1 1 0
chr15:77484351|77484531 hsa-miR-6874-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:77484351|77484531
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence LQSTRLKVTAEIFGTKGRASRARCLGPTPLQAGG
Nucleotide Sequence CTGCAGAGCACAAGGCTAAAGGTTACAGCTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAG

CircID chr15:77484351|77484531
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MRSLEPKAEQAEPVVWAPHHCRQVDRSAAPLIVCP
Nucleotide Sequence CTGAGATCTTTGGAACCAAAGGCAGAGCAAGCAGAGCCCGTTGTCTGGGCCCCACACCACTGCAGGCAGGTGGATAGAAGTGCGGCCCCTCTCATAGTATGCCCATAA

CircID chr15:77484351|77484531
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MPYALTYGHTMRGAALLSTCLQWCGAQTTGSACSAFGSKDLSCNL
Nucleotide Sequence CTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCAGTGGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAACCTTTAG

CircID chr15:77484351|77484531
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MTGSSALCPDLWAYYERGRTSIHLPAVVWGPDNGLCLLCLWFQRSQL
Nucleotide Sequence ATGACAGGTAGTTCTGCCCTATGCCCTGACTTATGGGCATACTATGAGAGGGGCCGCACTTCTATCCACCTGCCTGCAGTGGTGTGGGGCCCAGACAACGGGCTCTGCTTGCTCTGCCTTTGGTTCCAAAGATCTCAGCTGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites