CircRNA Information

General Information
circRNA Basic Information
CircID chr15:78016546|78016701
Strand -
CircType exon
Host Gene ENSG00000167202.10;
Algorism CIRI2;
Sequence CTGACAAGATGAGGTTTAACAAATGCTTGCTCCGGCTGCTCTTGGCTCTCAACCTGCAGAGCATCCTCCAGCAACTGGGCTATGACCTCCCGGGTGGGCCCCTGGTCTTCTGAGCACACTGGTGTCTTCATTTCTTGGAGCAATATCAGGTATTTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:78016546|78016701 hsa-miR-137-5p 0 0 1
chr15:78016546|78016701 hsa-miR-137-3p 0 0 1
chr15:78016546|78016701 hsa-miR-335-5p 0 0 1
chr15:78016546|78016701 hsa-miR-335-3p 0 0 1
chr15:78016546|78016701 hsa-miR-648 0 0 1
chr15:78016546|78016701 hsa-miR-657 0 0 1
chr15:78016546|78016701 hsa-miR-765 0 0 1
chr15:78016546|78016701 hsa-miR-1203 0 0 1
chr15:78016546|78016701 hsa-miR-1205 0 0 1
chr15:78016546|78016701 hsa-miR-1287-5p 0 0 1
chr15:78016546|78016701 hsa-miR-1287-3p 0 0 1
chr15:78016546|78016701 hsa-miR-199a-5p 0 0 1
chr15:78016546|78016701 hsa-miR-1184 0 0 1
chr15:78016546|78016701 hsa-miR-199b-5p 0 0 1
chr15:78016546|78016701 hsa-miR-1183 1 0 0
chr15:78016546|78016701 hsa-miR-3651 1 0 0
chr15:78016546|78016701 hsa-miR-3135b 1 0 0
chr15:78016546|78016701 hsa-miR-4525 1 0 0
chr15:78016546|78016701 hsa-miR-6894-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6799-5p 1 0 0
chr15:78016546|78016701 hsa-miR-3192-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6880-5p 1 0 0
chr15:78016546|78016701 hsa-miR-4722-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6741-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6721-5p 1 0 0
chr15:78016546|78016701 hsa-miR-197-5p 1 0 0
chr15:78016546|78016701 hsa-miR-615-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6772-3p 1 0 0
chr15:78016546|78016701 hsa-miR-6771-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6789-5p 1 0 0
chr15:78016546|78016701 hsa-miR-1273h-5p 1 0 0
chr15:78016546|78016701 hsa-miR-4763-3p 1 0 0
chr15:78016546|78016701 hsa-miR-6743-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6780a-5p 1 0 0
chr15:78016546|78016701 hsa-miR-1909-3p 1 0 0
chr15:78016546|78016701 hsa-miR-328-5p 1 0 0
chr15:78016546|78016701 hsa-miR-6883-5p 1 0 0
chr15:78016546|78016701 hsa-miR-1914-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr15:78016546|78016701
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MTSRVGPWSSEHTGVFISWSNIRYL
Nucleotide Sequence ATGACCTCCCGGGTGGGCCCCTGGTCTTCTGAGCACACTGGTGTCTTCATTTCTTGGAGCAATATCAGGTATTTA

CircID chr15:78016546|78016701
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MRFNKCLLRLLLALNLQSILQQLGYDLPGGPLVF
Nucleotide Sequence ATGAGGTTTAACAAATGCTTGCTCCGGCTGCTCTTGGCTCTCAACCTGCAGAGCATCCTCCAGCAACTGGGCTATGACCTCCCGGGTGGGCCCCTGGTCTTCTGA

CircID chr15:78016546|78016701
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MILLQEMKTPVCSEDQGPTREVIAQLLEDALQVESQEQPEQAFVKPHLV
Nucleotide Sequence CTGATATTGCTCCAAGAAATGAAGACACCAGTGTGCTCAGAAGACCAGGGGCCCACCCGGGAGGTCATAGCCCAGTTGCTGGAGGATGCTCTGCAGGTTGAGAGCCAAGAGCAGCCGGAGCAAGCATTTGTTAAACCTCATCTTGTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites