CircRNA Information

General Information
circRNA Basic Information
CircID chr15:80979187|80979333
Strand -
CircType exon
Host Gene ENSG00000117899.9;
Algorism CIRI2;
Sequence CTGTCCCCCCACAGCGCGTCACTGCTGCCCCATCACAGGTCTTCTCTTTTATTCCCAGCTCGATTTTCTTCCTTGGAAGACCGAGATTTCAGATCTCCTTCCTTCTTTTTTTTGCCCTTGTCTTGCTTTGTTTTATTTTTCTCTTTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:80979187|80979333 hsa-miR-1253 1 0 1
chr15:80979187|80979333 hsa-miR-1252-5p 0 0 1
chr15:80979187|80979333 hsa-miR-1252-3p 0 0 1
chr15:80979187|80979333 hsa-miR-491-5p 0 0 1
chr15:80979187|80979333 hsa-miR-486-3p 1 0 1
chr15:80979187|80979333 hsa-miR-330-3p 0 0 1
chr15:80979187|80979333 hsa-miR-663a 1 0 0
chr15:80979187|80979333 hsa-miR-762 1 0 0
chr15:80979187|80979333 hsa-miR-1270 1 0 0
chr15:80979187|80979333 hsa-miR-3147 1 0 0
chr15:80979187|80979333 hsa-miR-3185 1 0 0
chr15:80979187|80979333 hsa-miR-320e 1 0 0
chr15:80979187|80979333 hsa-miR-3196 1 0 0
chr15:80979187|80979333 hsa-miR-4270 1 0 0
chr15:80979187|80979333 hsa-miR-3916 1 0 0
chr15:80979187|80979333 hsa-miR-4425 1 0 0
chr15:80979187|80979333 hsa-miR-4440 1 0 0
chr15:80979187|80979333 hsa-miR-4487 1 0 0
chr15:80979187|80979333 hsa-miR-4492 1 0 0
chr15:80979187|80979333 hsa-miR-4498 1 0 0
chr15:80979187|80979333 hsa-miR-4533 1 0 0
chr15:80979187|80979333 hsa-miR-3960 1 0 0
chr15:80979187|80979333 hsa-miR-4656 1 0 0
chr15:80979187|80979333 hsa-miR-4675 1 0 0
chr15:80979187|80979333 hsa-miR-4688 1 0 0
chr15:80979187|80979333 hsa-miR-4689 1 0 0
chr15:80979187|80979333 hsa-miR-5090 1 0 0
chr15:80979187|80979333 hsa-miR-5787 1 0 0
chr15:80979187|80979333 hsa-miR-8082 1 0 0
chr15:80979187|80979333 hsa-miR-8089 1 0 0
chr15:80979187|80979333 hsa-miR-12115 1 0 0
chr15:80979187|80979333 hsa-miR-12118 1 0 0
chr15:80979187|80979333 hsa-miR-4731-5p 1 0 0
chr15:80979187|80979333 hsa-miR-1247-3p 1 0 0
chr15:80979187|80979333 hsa-miR-4433a-3p 1 0 0
chr15:80979187|80979333 hsa-miR-671-5p 1 0 0
chr15:80979187|80979333 hsa-miR-7106-5p 1 0 0
chr15:80979187|80979333 hsa-miR-766-5p 1 0 0
chr15:80979187|80979333 hsa-miR-1227-5p 1 0 0
chr15:80979187|80979333 hsa-miR-3192-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4695-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6746-5p 1 0 0
chr15:80979187|80979333 hsa-miR-7154-3p 1 0 0
chr15:80979187|80979333 hsa-miR-6820-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6716-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6871-5p 1 0 0
chr15:80979187|80979333 hsa-miR-3151-5p 1 0 0
chr15:80979187|80979333 hsa-miR-3180-3p 1 0 0
chr15:80979187|80979333 hsa-miR-6770-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6760-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6874-5p 1 0 0
chr15:80979187|80979333 hsa-miR-5008-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6786-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6835-5p 1 0 0
chr15:80979187|80979333 hsa-miR-3944-3p 1 0 0
chr15:80979187|80979333 hsa-miR-204-3p 1 0 0
chr15:80979187|80979333 hsa-miR-885-3p 1 0 0
chr15:80979187|80979333 hsa-miR-7854-3p 1 0 0
chr15:80979187|80979333 hsa-miR-4446-3p 1 0 0
chr15:80979187|80979333 hsa-miR-6830-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6828-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6878-5p 1 0 0
chr15:80979187|80979333 hsa-miR-7112-5p 1 0 0
chr15:80979187|80979333 hsa-miR-423-5p 1 0 0
chr15:80979187|80979333 hsa-miR-654-5p 1 0 0
chr15:80979187|80979333 hsa-miR-551b-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4444 1 0 0
chr15:80979187|80979333 hsa-miR-1207-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4763-3p 1 0 0
chr15:80979187|80979333 hsa-miR-5001-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6743-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6756-5p 1 0 0
chr15:80979187|80979333 hsa-miR-7107-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6722-3p 1 0 0
chr15:80979187|80979333 hsa-miR-6788-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6879-5p 1 0 0
chr15:80979187|80979333 hsa-miR-1237-5p 1 0 0
chr15:80979187|80979333 hsa-miR-328-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4632-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6735-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6777-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4436b-3p 1 0 0
chr15:80979187|80979333 hsa-miR-6511a-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6856-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4700-5p 1 0 0
chr15:80979187|80979333 hsa-miR-3173-3p 1 0 0
chr15:80979187|80979333 hsa-miR-4646-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4747-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6876-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6891-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6750-5p 1 0 0
chr15:80979187|80979333 hsa-miR-4667-5p 1 0 0
chr15:80979187|80979333 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr15:80979187|80979333
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence LSPHSASLLPHHRSSLLFPARFSSLEDRDFRSPSFFFLPLSCFVLFFSL
Nucleotide Sequence CTGTCCCCCCACAGCGCGTCACTGCTGCCCCATCACAGGTCTTCTCTTTTATTCCCAGCTCGATTTTCTTCCTTGGAAGACCGAGATTTCAGATCTCCTTCCTTCTTTTTTTTGCCCTTGTCTTGCTTTGTTTTATTTTTCTCTTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab