CircRNA Information

General Information
circRNA Basic Information
CircID chr15:81135270|81143820
Strand +
CircType exon
Host Gene ENSG00000156206.13;
Algorism find_circ;CIRI2;DCC;
Sequence TTGTATTTGTCAAGTGACCACAGGACCCTCCTGAAATCGTCTAAGAGGTCTTGGCTCCAGGAAGTGTACCTAACAGATGAGGTCTCCCATGTGAACTGCTGGCAGGCTGCCTTCCCTGACCCCCAGTTACGCCTGGAATATGAAGGCTTCCCCGTCCCG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr15:81135270|81143820
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence LYLSSDHRTLLKSSKRSWLQEVYLTDEVSHVNCWQAAFPDPQLRLEYEGFPVP
Nucleotide Sequence TTGTATTTGTCAAGTGACCACAGGACCCTCCTGAAATCGTCTAAGAGGTCTTGGCTCCAGGAAGTGTACCTAACAGATGAGGTCTCCCATGTGAACTGCTGGCAGGCTGCCTTCCCTGACCCCCAGTTACGCCTGGAATATGAAGGCTTCCCCGTCCCG

CircID chr15:81135270|81143820
ORF Type ORF2
Protein Length 52
Nucleotide Length 156
Protein Sequence GTGKPSYSRRNWGSGKAACQQFTWETSSVRYTSWSQDLLDDFRRVLWSLDKY
Nucleotide Sequence GGGACGGGGAAGCCTTCATATTCCAGGCGTAACTGGGGGTCAGGGAAGGCAGCCTGCCAGCAGTTCACATGGGAGACCTCATCTGTTAGGTACACTTCCTGGAGCCAAGACCTCTTAGACGATTTCAGGAGGGTCCTGTGGTCACTTGACAAATAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr15:81135270|81143820 ELAVL1 0 2 0
chr15:81135270|81143820 PRPF8 0 2 0
chr15:81135270|81143820 TAF15 1 0 0
chr15:81135270|81143820 DKC1 0 1 0
chr15:81135270|81143820 IGF2BP2 0 0 1
chr15:81135270|81143820 AGO2 1 0 0
chr15:81135270|81143820 FUS 1 0 0