CircRNA Information

General Information
circRNA Basic Information
CircID chr15:82854644|82859060
Strand -
CircType exon
Host Gene ENSG00000103942.11;
Algorism CIRI2;
Sequence CTTGTTGCGGAGCCGGTCATTCTCATCACGGCAGATGGAGAACTGCCTCTTCCACTGCTCCACACTGGCTGCCGACTCCTGCAGTGCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTGCAGCTCGATCTCCCACTTCTTCACGTTGGCTGCGCTCTGCGTCAAGGCAATCTTCAGCTTGTCATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr15:82854644|82859060 hsa-miR-136-5p 0 0 1
chr15:82854644|82859060 hsa-miR-136-3p 0 0 1
chr15:82854644|82859060 hsa-miR-558 0 0 1
chr15:82854644|82859060 hsa-miR-575 0 1 1
chr15:82854644|82859060 hsa-miR-580-5p 0 0 1
chr15:82854644|82859060 hsa-miR-580-3p 0 0 1
chr15:82854644|82859060 hsa-miR-1205 0 0 1
chr15:82854644|82859060 hsa-miR-1286 0 0 1
chr15:82854644|82859060 hsa-miR-1827 0 0 1
chr15:82854644|82859060 hsa-miR-199a-5p 0 0 1
chr15:82854644|82859060 hsa-miR-140-3p 0 0 1
chr15:82854644|82859060 hsa-miR-199b-5p 0 0 1
chr15:82854644|82859060 hsa-miR-509-3-5p 0 1 1
chr15:82854644|82859060 hsa-miR-509-5p 0 1 1
chr15:82854644|82859060 hsa-miR-515-5p 0 0 1
chr15:82854644|82859060 hsa-miR-7 0 0 1
chr15:82854644|82859060 hsa-miR-638 1 0 0
chr15:82854644|82859060 hsa-miR-1183 0 1 0
chr15:82854644|82859060 hsa-miR-1257 1 0 0
chr15:82854644|82859060 hsa-miR-3137 1 0 0
chr15:82854644|82859060 hsa-miR-3147 1 0 0
chr15:82854644|82859060 hsa-miR-3185 1 1 0
chr15:82854644|82859060 hsa-miR-4298 1 0 0
chr15:82854644|82859060 hsa-miR-4302 0 1 0
chr15:82854644|82859060 hsa-miR-3908 0 1 0
chr15:82854644|82859060 hsa-miR-3911 1 1 0
chr15:82854644|82859060 hsa-miR-4418 0 1 0
chr15:82854644|82859060 hsa-miR-3135b 1 0 0
chr15:82854644|82859060 hsa-miR-4479 1 0 0
chr15:82854644|82859060 hsa-miR-3960 1 0 0
chr15:82854644|82859060 hsa-miR-4683 0 1 0
chr15:82854644|82859060 hsa-miR-6081 1 1 0
chr15:82854644|82859060 hsa-miR-7704 1 0 0
chr15:82854644|82859060 hsa-miR-12115 1 1 0
chr15:82854644|82859060 hsa-miR-4433b-3p 1 1 0
chr15:82854644|82859060 hsa-miR-4433a-3p 1 0 0
chr15:82854644|82859060 hsa-miR-6799-5p 1 0 0
chr15:82854644|82859060 hsa-miR-7847-3p 1 0 0
chr15:82854644|82859060 hsa-miR-4709-3p 0 1 0
chr15:82854644|82859060 hsa-miR-4722-5p 1 1 0
chr15:82854644|82859060 hsa-miR-3151-5p 1 0 0
chr15:82854644|82859060 hsa-miR-4783-3p 1 0 0
chr15:82854644|82859060 hsa-miR-30c-2-3p 0 1 0
chr15:82854644|82859060 hsa-miR-885-3p 1 0 0
chr15:82854644|82859060 hsa-miR-6771-5p 1 1 0
chr15:82854644|82859060 hsa-miR-889-5p 0 1 0
chr15:82854644|82859060 hsa-miR-4732-5p 0 1 0
chr15:82854644|82859060 hsa-miR-7156-3p 1 1 0
chr15:82854644|82859060 hsa-miR-7846-3p 1 0 0
chr15:82854644|82859060 hsa-miR-339-3p 1 0 0
chr15:82854644|82859060 hsa-miR-4727-3p 1 0 0
chr15:82854644|82859060 hsa-miR-383-3p 0 1 0
chr15:82854644|82859060 hsa-miR-2277-5p 1 0 0
chr15:82854644|82859060 hsa-miR-1233-5p 1 1 0
chr15:82854644|82859060 hsa-miR-1273h-5p 1 1 0
chr15:82854644|82859060 hsa-miR-4763-3p 1 0 0
chr15:82854644|82859060 hsa-miR-6778-5p 0 1 0
chr15:82854644|82859060 hsa-miR-6743-5p 1 0 0
chr15:82854644|82859060 hsa-miR-6756-5p 1 0 0
chr15:82854644|82859060 hsa-miR-6722-3p 1 0 0
chr15:82854644|82859060 hsa-miR-6788-5p 0 1 0
chr15:82854644|82859060 hsa-miR-4632-5p 1 0 0
chr15:82854644|82859060 hsa-miR-4745-5p 1 0 0
chr15:82854644|82859060 hsa-miR-4758-5p 1 0 0
chr15:82854644|82859060 hsa-miR-34b-5p 0 1 0
chr15:82854644|82859060 hsa-miR-6511b-5p 1 0 0
chr15:82854644|82859060 hsa-miR-30c-1-3p 0 1 0
chr15:82854644|82859060 hsa-miR-6731-5p 0 1 0
chr15:82854644|82859060 hsa-miR-10394-5p 0 1 0
chr15:82854644|82859060 hsa-miR-4676-5p 1 1 0
chr15:82854644|82859060 hsa-miR-10397-5p 0 1 0
chr15:82854644|82859060 hsa-miR-380-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr15:82854644|82859060
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MPLPLLHTGCRLLQCCGQPCIALPKGLQLDLPLLHVGCALRQGNLQLVI
Nucleotide Sequence CTGCCTCTTCCACTGCTCCACACTGGCTGCCGACTCCTGCAGTGCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTGCAGCTCGATCTCCCACTTCTTCACGTTGGCTGCGCTCTGCGTCAAGGCAATCTTCAGCTTGTCATT

CircID chr15:82854644|82859060
ORF Type ORF2
Protein Length 62
Nucleotide Length 186
Protein Sequence LLRSRSFSSRQMENCLFHCSTLAADSCSAVVSRALLSRRVCSSISHFFTLAALCVKAIFSLS
Nucleotide Sequence TTGTTGCGGAGCCGGTCATTCTCATCACGGCAGATGGAGAACTGCCTCTTCCACTGCTCCACACTGGCTGCCGACTCCTGCAGTGCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTGCAGCTCGATCTCCCACTTCTTCACGTTGGCTGCGCTCTGCGTCAAGGCAATCTTCAGCTTGTCA

CircID chr15:82854644|82859060
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MPTPAVLWSAVHCSPEGSAARSPTSSRWLRSASRQSSACH
Nucleotide Sequence CTGCCGACTCCTGCAGTGCTGTGGTCAGCCGTGCATTGCTCTCCCGAAGGGTCTGCAGCTCGATCTCCCACTTCTTCACGTTGGCTGCGCTCTGCGTCAAGGCAATCTTCAGCTTGTCAT

CircID chr15:82854644|82859060
ORF Type ORF4
Protein Length 60
Nucleotide Length 180
Protein Sequence MKIALTQSAANVKKWEIELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRNK
Nucleotide Sequence CTGAAGATTGCCTTGACGCAGAGCGCAGCCAACGTGAAGAAGTGGGAGATCGAGCTGCAGACCCTTCGGGAGAGCAATGCACGGCTGACCACAGCACTGCAGGAGTCGGCAGCCAGTGTGGAGCAGTGGAAGAGGCAGTTCTCCATCTGCCGTGATGAGAATGACCGGCTCCGCAACAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites